Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000616-TA|BGIBMGA000616-PA|undefined
(144 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U00033-1|AAC48292.3| 731|Caenorhabditis elegans Hypothetical pr... 30 0.74
Z81581-13|CAH10785.1| 628|Caenorhabditis elegans Hypothetical p... 29 0.98
Z81581-11|CAB70244.3| 635|Caenorhabditis elegans Hypothetical p... 29 0.98
Z81581-2|CAD56595.1| 672|Caenorhabditis elegans Hypothetical pr... 29 0.98
Z81581-1|CAD56594.1| 655|Caenorhabditis elegans Hypothetical pr... 29 0.98
Z75534-3|CAH04714.1| 628|Caenorhabditis elegans Hypothetical pr... 29 0.98
Z75534-2|CAA99825.4| 635|Caenorhabditis elegans Hypothetical pr... 29 0.98
Z67995-5|CAA91946.1| 2692|Caenorhabditis elegans Hypothetical pr... 29 1.3
Z67737-7|CAA91543.1| 2692|Caenorhabditis elegans Hypothetical pr... 29 1.3
Z49068-10|CAA88860.1| 556|Caenorhabditis elegans Hypothetical p... 28 2.3
AC024755-2|AAL65800.1| 498|Caenorhabditis elegans Hypothetical ... 28 3.0
Z81128-1|CAB03398.1| 568|Caenorhabditis elegans Hypothetical pr... 27 3.9
Z46934-6|CAA87045.3| 371|Caenorhabditis elegans Hypothetical pr... 27 3.9
AF013953-1|AAC47750.1| 568|Caenorhabditis elegans mom-5 protein. 27 3.9
U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical pr... 27 6.9
Z81463-4|CAB03852.2| 3118|Caenorhabditis elegans Hypothetical pr... 26 9.1
AL110485-30|CAB60376.3| 732|Caenorhabditis elegans Hypothetical... 26 9.1
AL032628-3|CAA21554.2| 164|Caenorhabditis elegans Hypothetical ... 26 9.1
AF067611-2|AAW88406.1| 2302|Caenorhabditis elegans Cadherin fami... 26 9.1
>U00033-1|AAC48292.3| 731|Caenorhabditis elegans Hypothetical
protein F37C12.7 protein.
Length = 731
Score = 29.9 bits (64), Expect = 0.74
Identities = 17/88 (19%), Positives = 39/88 (44%), Gaps = 1/88 (1%)
Query: 49 LNIVCCCSRYSDYWLDRHTGNRWIVSIWS-TTPHKQPPLDLTELNIEKLPIQFVAPYHSD 107
+NI CC Y L G + I +T PP+ +++ + + +P++
Sbjct: 472 MNICMCCPVVQGYGLTETCGAACVADINDLSTGTVGPPVRCSDIALREWSEGGYSPFNDP 531
Query: 108 EYHEVLRHESDLPPSISRQPLTSSQEYL 135
E+L ++ P +QP ++++++
Sbjct: 532 PQGEILISGENISPGYYKQPEKTAEDFI 559
>Z81581-13|CAH10785.1| 628|Caenorhabditis elegans Hypothetical
protein F08A10.1d protein.
Length = 628
Score = 29.5 bits (63), Expect = 0.98
Identities = 14/50 (28%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 62 WLDRHTGNRWIVSIWSTTPHKQPPLDLTELNIEKLPIQFVAPYHSDEYHE 111
+++ + + W+V++ S Q L+L + LPI+F+AP+ +D +H+
Sbjct: 280 FMNANAADDWMVAL-SFRRTCQIGLELLICMLCPLPIEFIAPFMNDRFHD 328
>Z81581-11|CAB70244.3| 635|Caenorhabditis elegans Hypothetical
protein F08A10.1a protein.
Length = 635
Score = 29.5 bits (63), Expect = 0.98
Identities = 14/50 (28%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 62 WLDRHTGNRWIVSIWSTTPHKQPPLDLTELNIEKLPIQFVAPYHSDEYHE 111
+++ + + W+V++ S Q L+L + LPI+F+AP+ +D +H+
Sbjct: 287 FMNANAADDWMVAL-SFRRTCQIGLELLICMLCPLPIEFIAPFMNDRFHD 335
>Z81581-2|CAD56595.1| 672|Caenorhabditis elegans Hypothetical
protein F08A10.1c protein.
Length = 672
Score = 29.5 bits (63), Expect = 0.98
Identities = 14/50 (28%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 62 WLDRHTGNRWIVSIWSTTPHKQPPLDLTELNIEKLPIQFVAPYHSDEYHE 111
+++ + + W+V++ S Q L+L + LPI+F+AP+ +D +H+
Sbjct: 307 FMNANAADDWMVAL-SFRRTCQIGLELLICMLCPLPIEFIAPFMNDRFHD 355
>Z81581-1|CAD56594.1| 655|Caenorhabditis elegans Hypothetical
protein F08A10.1b protein.
Length = 655
Score = 29.5 bits (63), Expect = 0.98
Identities = 14/50 (28%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 62 WLDRHTGNRWIVSIWSTTPHKQPPLDLTELNIEKLPIQFVAPYHSDEYHE 111
+++ + + W+V++ S Q L+L + LPI+F+AP+ +D +H+
Sbjct: 307 FMNANAADDWMVAL-SFRRTCQIGLELLICMLCPLPIEFIAPFMNDRFHD 355
>Z75534-3|CAH04714.1| 628|Caenorhabditis elegans Hypothetical
protein F08A10.1d protein.
Length = 628
Score = 29.5 bits (63), Expect = 0.98
Identities = 14/50 (28%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 62 WLDRHTGNRWIVSIWSTTPHKQPPLDLTELNIEKLPIQFVAPYHSDEYHE 111
+++ + + W+V++ S Q L+L + LPI+F+AP+ +D +H+
Sbjct: 280 FMNANAADDWMVAL-SFRRTCQIGLELLICMLCPLPIEFIAPFMNDRFHD 328
>Z75534-2|CAA99825.4| 635|Caenorhabditis elegans Hypothetical
protein F08A10.1a protein.
Length = 635
Score = 29.5 bits (63), Expect = 0.98
Identities = 14/50 (28%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 62 WLDRHTGNRWIVSIWSTTPHKQPPLDLTELNIEKLPIQFVAPYHSDEYHE 111
+++ + + W+V++ S Q L+L + LPI+F+AP+ +D +H+
Sbjct: 287 FMNANAADDWMVAL-SFRRTCQIGLELLICMLCPLPIEFIAPFMNDRFHD 335
>Z67995-5|CAA91946.1| 2692|Caenorhabditis elegans Hypothetical protein
T01H10.8 protein.
Length = 2692
Score = 29.1 bits (62), Expect = 1.3
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
Query: 59 SDYWLDRHTGNRWIVSIWSTTPHKQPPLDLTELN--IEKLPIQFVAPYHSDEYHEV 112
S YWLD+ +++ TP QP D++E+N +EKL AP + +E+
Sbjct: 1776 SRYWLDQRNEVISKINLKGRTP--QPYCDVSEINFSLEKLQKSLAAPRNMKRINEI 1829
>Z67737-7|CAA91543.1| 2692|Caenorhabditis elegans Hypothetical protein
T01H10.8 protein.
Length = 2692
Score = 29.1 bits (62), Expect = 1.3
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
Query: 59 SDYWLDRHTGNRWIVSIWSTTPHKQPPLDLTELN--IEKLPIQFVAPYHSDEYHEV 112
S YWLD+ +++ TP QP D++E+N +EKL AP + +E+
Sbjct: 1776 SRYWLDQRNEVISKINLKGRTP--QPYCDVSEINFSLEKLQKSLAAPRNMKRINEI 1829
>Z49068-10|CAA88860.1| 556|Caenorhabditis elegans Hypothetical
protein K01C8.9 protein.
Length = 556
Score = 28.3 bits (60), Expect = 2.3
Identities = 14/68 (20%), Positives = 34/68 (50%)
Query: 73 VSIWSTTPHKQPPLDLTELNIEKLPIQFVAPYHSDEYHEVLRHESDLPPSISRQPLTSSQ 132
+S+ ++ P K+ L E EK+ ++ A + + H + + +++LP + +S+
Sbjct: 49 ISVPNSCPFKEEILVQAEQEREKIKVRQEAAKEAAKIHRIEKRKNNLPANFESMVAKASK 108
Query: 133 EYLELQKR 140
+ E K+
Sbjct: 109 QGTEFDKK 116
>AC024755-2|AAL65800.1| 498|Caenorhabditis elegans Hypothetical
protein Y34B4A.10 protein.
Length = 498
Score = 27.9 bits (59), Expect = 3.0
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Query: 86 LDLTELNIEKLPI--QFVAPYHSDEYHEVLRHESDLPPSISRQPLTSSQ 132
L TE NIE +PI + +P DE + S + P+ P+T+S+
Sbjct: 121 LSFTEFNIESMPIIKETDSPSSFDEKSNIGLTSSSVAPTSPEVPVTTSE 169
>Z81128-1|CAB03398.1| 568|Caenorhabditis elegans Hypothetical
protein T23D8.1 protein.
Length = 568
Score = 27.5 bits (58), Expect = 3.9
Identities = 12/36 (33%), Positives = 22/36 (61%)
Query: 8 DLFTGNGTYKSINPIISKVGDFTPFYIAIAISSVIL 43
D+FTG + ++NP FTP +++A+ +V+L
Sbjct: 378 DVFTGICSVGNLNPSALVYFFFTPIVVSLALGAVLL 413
>Z46934-6|CAA87045.3| 371|Caenorhabditis elegans Hypothetical
protein ZK1320.7 protein.
Length = 371
Score = 27.5 bits (58), Expect = 3.9
Identities = 11/24 (45%), Positives = 17/24 (70%)
Query: 78 TTPHKQPPLDLTELNIEKLPIQFV 101
TT ++ PP L LN E++P++FV
Sbjct: 3 TTNYQLPPQKLGNLNPEQVPVEFV 26
>AF013953-1|AAC47750.1| 568|Caenorhabditis elegans mom-5 protein.
Length = 568
Score = 27.5 bits (58), Expect = 3.9
Identities = 12/36 (33%), Positives = 22/36 (61%)
Query: 8 DLFTGNGTYKSINPIISKVGDFTPFYIAIAISSVIL 43
D+FTG + ++NP FTP +++A+ +V+L
Sbjct: 378 DVFTGICSVGNLNPSALVYFFFTPIVVSLALGAVLL 413
>U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical protein
B0207.5 protein.
Length = 3279
Score = 26.6 bits (56), Expect = 6.9
Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 7/68 (10%)
Query: 73 VSIWSTTPHKQPPLDLTELNIEKLPIQFVAPYHSDEYHEVLRHESDLPPSISRQPLTSSQ 132
VSI T +PP D E N+EK I P D +SD S++ L+ S
Sbjct: 979 VSITKTVVINKPPKDGNEPNVEKTVIVKNTPGPDDP------EKSDYCASVNPSELSES- 1031
Query: 133 EYLELQKR 140
EY E +K+
Sbjct: 1032 EYKEYKKK 1039
>Z81463-4|CAB03852.2| 3118|Caenorhabditis elegans Hypothetical protein
C06B8.7 protein.
Length = 3118
Score = 26.2 bits (55), Expect = 9.1
Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 5/42 (11%)
Query: 14 GTYKSINPIISKVGDFTPFYIAIAISSVILGFLLILNIVCCC 55
GT+ PI+ + G P I +++VIL FLL++ ++C C
Sbjct: 2818 GTHPYSEPILWRPGIIIP----IILAAVIL-FLLVILLICWC 2854
>AL110485-30|CAB60376.3| 732|Caenorhabditis elegans Hypothetical
protein Y46G5A.10 protein.
Length = 732
Score = 26.2 bits (55), Expect = 9.1
Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 9/76 (11%)
Query: 77 STTPHKQPPLDLTELNIEKLPIQFVAPYHSDEYHEVLRHES--DLPPSISRQPLTS---- 130
S TP +P EL +KLP V P ++ +H S L PS S + L +
Sbjct: 111 SVTPDYEPLRKEPELKEQKLPTYQVIPPTPEKNTPRHQHHSGITLSPSDSSRTLGALPKK 170
Query: 131 ---SQEYLELQKRESD 143
+EYL++QK++ +
Sbjct: 171 PPMYEEYLQMQKKDEN 186
>AL032628-3|CAA21554.2| 164|Caenorhabditis elegans Hypothetical
protein Y38H6A.2 protein.
Length = 164
Score = 26.2 bits (55), Expect = 9.1
Identities = 9/22 (40%), Positives = 13/22 (59%)
Query: 49 LNIVCCCSRYSDYWLDRHTGNR 70
L +CCC YS +D+ G+R
Sbjct: 55 LGYICCCVHYSITIIDKQIGSR 76
>AF067611-2|AAW88406.1| 2302|Caenorhabditis elegans Cadherin family
protein 10 protein.
Length = 2302
Score = 26.2 bits (55), Expect = 9.1
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 38 ISSVILGFLLILNIVCCCSRYSDY 61
+ +I+ L +L VCC SRY Y
Sbjct: 2230 VGLLIIALLALLIYVCCVSRYQRY 2253
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.320 0.137 0.425
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,003,764
Number of Sequences: 27539
Number of extensions: 169023
Number of successful extensions: 497
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 483
Number of HSP's gapped (non-prelim): 21
length of query: 144
length of database: 12,573,161
effective HSP length: 75
effective length of query: 69
effective length of database: 10,507,736
effective search space: 725033784
effective search space used: 725033784
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 55 (26.2 bits)
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