Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000615-TA|BGIBMGA000615-PA|IPR003104|Actin-binding FH2
(1199 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_812| Best HMM Match : FH2 (HMM E-Value=0) 197 4e-50
SB_16125| Best HMM Match : No HMM Matches (HMM E-Value=.) 108 2e-23
SB_33909| Best HMM Match : FH2 (HMM E-Value=0) 86 1e-16
SB_13398| Best HMM Match : No HMM Matches (HMM E-Value=.) 85 2e-16
SB_7112| Best HMM Match : ACBP (HMM E-Value=2.3) 76 2e-13
SB_43826| Best HMM Match : FH2 (HMM E-Value=0.00048) 63 1e-09
SB_13397| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 2e-06
SB_15279| Best HMM Match : FH2 (HMM E-Value=5.6) 46 1e-04
SB_16163| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.009
SB_9394| Best HMM Match : Drf_GBD (HMM E-Value=0.017) 38 0.049
SB_52974| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.20
SB_40923| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.29) 34 0.79
SB_17203| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 1.1
SB_37556| Best HMM Match : FH2 (HMM E-Value=6.1) 33 1.1
SB_8469| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 1.1
SB_59712| Best HMM Match : SAP (HMM E-Value=3e-13) 32 2.4
SB_59011| Best HMM Match : DUF1279 (HMM E-Value=0.51) 32 3.2
SB_43487| Best HMM Match : K-box (HMM E-Value=0.79) 31 4.2
SB_43260| Best HMM Match : Gemini_mov (HMM E-Value=0.94) 31 4.2
SB_36848| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 4.2
SB_44820| Best HMM Match : 7tm_1 (HMM E-Value=9e-15) 31 4.2
SB_43856| Best HMM Match : Laminin_I (HMM E-Value=0.057) 31 4.2
SB_43343| Best HMM Match : fn3 (HMM E-Value=3.4e-39) 31 4.2
SB_41880| Best HMM Match : TolA (HMM E-Value=2.2) 31 4.2
SB_19404| Best HMM Match : Pkinase (HMM E-Value=0.00019) 31 4.2
SB_44114| Best HMM Match : RRM_1 (HMM E-Value=9.9e-35) 31 5.6
SB_26915| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 5.6
SB_24923| Best HMM Match : rve (HMM E-Value=1.5e-11) 31 5.6
SB_56618| Best HMM Match : DUF1213 (HMM E-Value=0.022) 31 7.4
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 31 7.4
SB_25653| Best HMM Match : U-box (HMM E-Value=0.0064) 31 7.4
SB_19183| Best HMM Match : SOUL (HMM E-Value=2.1) 31 7.4
SB_18496| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 7.4
SB_55326| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 7.4
SB_18529| Best HMM Match : DUF1388 (HMM E-Value=3.5) 31 7.4
SB_9925| Best HMM Match : Kinesin (HMM E-Value=0.00094) 31 7.4
SB_23213| Best HMM Match : SH3_1 (HMM E-Value=9.2e-12) 30 9.8
SB_20121| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 9.8
SB_10355| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0037) 30 9.8
SB_9088| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 9.8
SB_48686| Best HMM Match : rve (HMM E-Value=1.2e-19) 30 9.8
SB_42227| Best HMM Match : SDA1 (HMM E-Value=0.66) 30 9.8
SB_36474| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 9.8
SB_18162| Best HMM Match : E-MAP-115 (HMM E-Value=0.21) 30 9.8
>SB_812| Best HMM Match : FH2 (HMM E-Value=0)
Length = 1430
Score = 197 bits (481), Expect = 4e-50
Identities = 94/144 (65%), Positives = 117/144 (81%)
Query: 786 KRNLILDAKRSNAINIAMKKLPTPQTIKAAIMKMDATVIGREGIEKLLTMLPTEEEKVKI 845
K ++LD KRS INIA+ KLP +T+K AI+ MD+TVI REG++KLL M P EEK+KI
Sbjct: 793 KEIVVLDVKRSQQINIALTKLPPIRTLKQAIISMDSTVIDREGVDKLLQMQPLPEEKMKI 852
Query: 846 QEAQYANPDLPLGSAEQFLLTLASINELSSRLKLWVFKLDFDNLEKEIAEPLMDLKQGIE 905
QEAQ ANPD+PLG+AEQFLLT+AS+NEL+ RL LW FKLD++ LEKE+AEPLMDLK+ +E
Sbjct: 853 QEAQLANPDVPLGTAEQFLLTMASLNELAPRLHLWAFKLDYEMLEKEVAEPLMDLKEALE 912
Query: 906 LLKVNKTFKVILSTLRSVGNFLNG 929
L N TFK IL+TL ++GNFLNG
Sbjct: 913 ELNKNNTFKHILATLLAIGNFLNG 936
Score = 130 bits (315), Expect = 5e-30
Identities = 55/93 (59%), Positives = 78/93 (83%)
Query: 932 VKGFRLEYLSKVMEVKDTVHKHPLLYHICEMIIEKFPDSTDFFSEVGPVIRASKVDFDIL 991
VKGF+L+YLSKV EVKDTVHK LLYH+C M++EKFPD+TD +SE+G + R+S+VDF+++
Sbjct: 1004 VKGFQLDYLSKVPEVKDTVHKQSLLYHLCCMVMEKFPDTTDLYSELGALHRSSRVDFEVV 1063
Query: 992 SVNLQKLESDCKASWDHMKRVAKHDSSQIFKTK 1024
+ NL+ L+ +CK SW+H+ VAKHDS++ K+K
Sbjct: 1064 AENLKNLKENCKRSWEHLSVVAKHDSTKQLKSK 1096
Score = 68.5 bits (160), Expect = 3e-11
Identities = 33/67 (49%), Positives = 47/67 (70%)
Query: 1070 SEFLKVIAEFALEYRTTRERVQQQMEKRANHRERNKTRGKMIIDVGNYSNKNGDHTADHA 1129
+EF K+I+EF+LEYRTTRERV++Q +KR RERN TRGK+I +V S+ + +A +
Sbjct: 1241 NEFCKIISEFSLEYRTTRERVREQKKKREKLRERNLTRGKLITEVHKKSSSSSPSSASSS 1300
Query: 1130 LKELLKT 1136
E K+
Sbjct: 1301 AAERHKS 1307
Score = 48.4 bits (110), Expect = 3e-05
Identities = 24/59 (40%), Positives = 37/59 (62%), Gaps = 5/59 (8%)
Query: 720 TIKKNKKTVKLFWKEIQENPVPVTVRPKVGGFIWDDLPSIDLDTAMLEHLFESRTNDLI 778
T+ K KK V+LFW+E++ +P+ V IW + +D+DT LEHLFE++T+ I
Sbjct: 688 TLNK-KKMVRLFWQEVKNSPLINGVNKT----IWGSIDQVDIDTKKLEHLFENKTSTKI 741
>SB_16125| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 276
Score = 108 bits (260), Expect = 2e-23
Identities = 55/90 (61%), Positives = 68/90 (75%), Gaps = 1/90 (1%)
Query: 80 EDFQDPVE-ILDNRKNALVLRTQLSVRVHSIMERLLHSQGRELRRALFSLKQILQSDKDL 138
E+ D +E LD+RKN ++LRT LSVRVH+ + +LL + GRELRRALFSLKQI Q DKDL
Sbjct: 149 EEQADLLEGFLDSRKNTIILRTSLSVRVHNCIAKLLAASGRELRRALFSLKQIFQDDKDL 208
Query: 139 VHEFVANKGLDCLMQVSNMADHNYLDYILR 168
VHEFV + GL+ L+ V AD NY +YILR
Sbjct: 209 VHEFVNSDGLNALITVGQDADQNYQNYILR 238
>SB_33909| Best HMM Match : FH2 (HMM E-Value=0)
Length = 1063
Score = 86.2 bits (204), Expect = 1e-16
Identities = 81/290 (27%), Positives = 135/290 (46%), Gaps = 25/290 (8%)
Query: 730 LFWKEIQ-ENPVPVTVRPKVGGFIWDDLPSIDLDTAMLEHLFES----RTNDLIIKKLME 784
LFWK IQ + P +P+ +W++L D++T+ F + L+ M
Sbjct: 767 LFWKRIQLKKP-----QPEPYTTLWENLIEPDINTSEFAKCFSKVERKKEGKLVSSNSMS 821
Query: 785 PKRNLI---LDAKRSNAINIAMKKLPTP-QTIKAAIMKMDATVIGREGIEKLLTMLPTEE 840
+ + L++KRS I I + L IK ++ KMD +VI E ++ L T+E
Sbjct: 822 KLKQKVVHLLESKRSQGIGILLSSLHANLDEIKDSLYKMDTSVIDYENLKALYENRGTKE 881
Query: 841 EKVKIQEAQYANPDLPLGSAEQFLLTLASINELSSRLKLWVFKLDFDNLEKEIAEPLMDL 900
E I++ NPD L EQFLL ++ I RL + + + +EI + L +
Sbjct: 882 ELSTIEQYLEDNPDAILDRPEQFLLDVSKIVCYEERLACLIARTTVRDGLEEIGQMLTNF 941
Query: 901 KQGIELLKVNKTFKVILSTLRSVGNFLNGSHV-----KGFRLEYLSKVMEVKDTVHKHPL 955
+ E L+ K I+ + + GNF+NG ++ GF LE + K+ +VK + L
Sbjct: 942 RLVCEELQKGKNVHNIMGLILAFGNFMNGGNMARGQADGFDLEIIPKLKDVKSRDNTSNL 1001
Query: 956 LYHICE---MIIEKFPD--STDF-FSEVGPVIRASKVDFDILSVNLQKLE 999
L ++ + MI +K S F E + AS+V FD + +L+ +E
Sbjct: 1002 LCYLVQEYVMIFDKDAGTLSAKFPLPEPADLQSASQVSFDDVQADLRNIE 1051
>SB_13398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2149
Score = 85.4 bits (202), Expect = 2e-16
Identities = 81/349 (23%), Positives = 158/349 (45%), Gaps = 31/349 (8%)
Query: 780 KKLMEPKRNLILDAKRSNAINIAMKKLP-TPQTIKAAIMKMDATVIGREGIEKLLTMLPT 838
K+ +P++ +L K++ I+I + L + + IK AIM+MD + + + +LL P
Sbjct: 997 KEPKKPEKPQVLGPKKAYNISILLGHLKKSAEEIKEAIMQMDDSKLNEAHLRQLLMYAPD 1056
Query: 839 EEEKVKIQEAQYANPDLPLGSAEQFLLTLASINELSSRLKLWVFKLDFDNLEKEIAEPLM 898
E +K + +A+ + A+ F ++ + + RLK +F+ FD+ E+ L
Sbjct: 1057 STELLKYK--YFADDVSKMDIADIFSFEMSKVPYYNQRLKAMLFRAQFDDKCDEVKPDLE 1114
Query: 899 DLKQGIELLKVNKTFKVILSTLRSVGNFLNGSHVK-----GFRLEYLSKVMEVKDTVHKH 953
+ L+ + + +L + GN++N + + F++ YL+K+ K T +K
Sbjct: 1115 AVIDAAAELRTSDKLQRVLELVLMTGNYMNKGNTRIAGAQAFKISYLTKLNTTKTTDNKS 1174
Query: 954 PLLYHICEMIIEKFPDSTDFFSEVGPVIRASKVDFDILSVNLQKLESDCKASWDHM---K 1010
LL + + I E+ P+ D ++ V A+KV +L+ +Q L K D + +
Sbjct: 1175 TLLNFLVQKIEERCPELLDVKDDLRTVPIAAKVSGQLLATEVQDLSRRMKGIKDDLISFQ 1234
Query: 1011 RVAKHDSSQIFK--------TKINEFLTDAAQRIILLSVIKKRVMSRFGKLLLRFGVPPS 1062
+A F TK + + ++ L ++K++ F ++ FG S
Sbjct: 1235 ALASQKEEDRFTENIITSSLTKCQNIIEETEGKLEELLDLQKKMNEDFRDVVKFFGEKDS 1294
Query: 1063 DIAKTKPSEFLKVIAEF------ALEYRTTRERVQQQMEKRANHRERNK 1105
K EF + A F A+ + T++++Q++ KR ERNK
Sbjct: 1295 ---KMTTEEFFGIFAAFLVHFNMAVNHNITKKKLQEEQAKR---EERNK 1337
>SB_7112| Best HMM Match : ACBP (HMM E-Value=2.3)
Length = 64
Score = 76.2 bits (179), Expect = 2e-13
Identities = 31/63 (49%), Positives = 49/63 (77%)
Query: 986 VDFDILSVNLQKLESDCKASWDHMKRVAKHDSSQIFKTKINEFLTDAAQRIILLSVIKKR 1045
VDF++++ NL+ L+ +CK SW+H+ VAKHDS++ K+K+ E LTDA +RI +L V+ +R
Sbjct: 1 VDFEVVAENLKNLKENCKRSWEHLSVVAKHDSTKQLKSKMTELLTDAQERITILKVVHRR 60
Query: 1046 VMS 1048
VM+
Sbjct: 61 VMN 63
>SB_43826| Best HMM Match : FH2 (HMM E-Value=0.00048)
Length = 156
Score = 63.3 bits (147), Expect = 1e-09
Identities = 43/154 (27%), Positives = 78/154 (50%), Gaps = 7/154 (4%)
Query: 836 LPTEEEKVKIQEAQYANPDLP-LGSAEQFLLTLASINELSSRLKLWVFKLDFDNLEKEIA 894
LPT EE+ + + D+P L ++F+L L I +L RL L + ++F ++A
Sbjct: 3 LPTPEEQEMYKNIKLE--DVPNLLHEDRFMLKLCEIPDLDKRLDLLLVIMEFPCQYDDLA 60
Query: 895 EPLMDLKQGIELLKVNKTFKVILSTLRSVGNFLNGSHVK----GFRLEYLSKVMEVKDTV 950
+ L + L +K F V+L + ++GN++NG + G RL L K+ +++
Sbjct: 61 PAVKGLLEACHELYCSKKFPVVLEYILAIGNYINGGTNRGGAYGLRLTSLPKLADIRGKS 120
Query: 951 HKHPLLYHICEMIIEKFPDSTDFFSEVGPVIRAS 984
K LL ++ + +K PD+ + E+ V +AS
Sbjct: 121 KKDTLLRYLISQLRQKCPDTLEMLQELKAVPQAS 154
>SB_13397| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 513
Score = 52.8 bits (121), Expect = 2e-06
Identities = 35/134 (26%), Positives = 62/134 (46%), Gaps = 1/134 (0%)
Query: 853 PDLPLGSAEQFLLTLASINELSSRLKLWVFKLDFDNLEKEIAEPLMDLKQGIELLKVNKT 912
PD GS + ++ R++ + K + I L + + + ++ +
Sbjct: 195 PDWKAGSERNAINVAKTVPAYEERIRTMLLKAQLQDRINHIKPYLTTVIEANKEIRNSTK 254
Query: 913 FKVILSTLRSVGNFLNGSHVKGFRLEYLSKVMEVKDTVHKH-PLLYHICEMIIEKFPDST 971
L + +VGNF+NGS GFR+ +L+K++ +K T K+ L +I II K P+
Sbjct: 255 LSDYLQMVLTVGNFMNGSQTAGFRVAFLTKLVFIKSTPDKNVSFLDYITRQIIRKNPELA 314
Query: 972 DFFSEVGPVIRASK 985
E+ V +ASK
Sbjct: 315 LLTDELLHVEKASK 328
>SB_15279| Best HMM Match : FH2 (HMM E-Value=5.6)
Length = 146
Score = 46.4 bits (105), Expect = 1e-04
Identities = 27/98 (27%), Positives = 50/98 (51%), Gaps = 4/98 (4%)
Query: 857 LGSAEQFLLTLASINELSSRLKLWVFKLDFDNLEKEIAEPLMDLKQGIELLKVNKTFKVI 916
L E+FL + ++ + RL+ W++K F +I L + L++ + +
Sbjct: 3 LDKPEEFLHQMHKMDHFNERLECWLYKDKFTETIHDIDRRLNVINDANCLIRTDTEVHFV 62
Query: 917 LSTLRSVGNFLNGSHVK----GFRLEYLSKVMEVKDTV 950
LS + ++GN++NGS + GF+L L K+ +VK V
Sbjct: 63 LSIVLALGNYMNGSTTRGQADGFQLNALLKLKDVKSQV 100
>SB_16163| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 853
Score = 40.3 bits (90), Expect = 0.009
Identities = 47/166 (28%), Positives = 70/166 (42%), Gaps = 10/166 (6%)
Query: 892 EIAEPLMDLKQGIELLKVNKTFKVILSTLRSVGNFLN-GSHVKG---FRLEYLSKVMEVK 947
E E L ++K I L + F V L L +GN++N GS +G F + YL+K+ K
Sbjct: 544 EQMEQLSNMKDQISELSEPEQFAVHLILL--MGNYMNTGSRNEGTIGFEISYLTKLSSTK 601
Query: 948 DTVHKHPLLYHICEMIIEKF-PDSTDFFSEVGPVIRASKVDFDILSV---NLQKLESDCK 1003
+ LL+ I + + K+ + F +E+G V A KV + S + L K
Sbjct: 602 SVDGQRNLLHFIADAVENKYSSEIAGFENELGHVEAAGKVKHEFYSSAKDQVDVLVEMHK 661
Query: 1004 ASWDHMKRVAKHDSSQIFKTKINEFLTDAAQRIILLSVIKKRVMSR 1049
K V + KT + EF D + S KK M R
Sbjct: 662 NMVTMFKDVLEFFCMDPKKTSMEEFFGDLKTFMDQYSQCKKENMKR 707
>SB_9394| Best HMM Match : Drf_GBD (HMM E-Value=0.017)
Length = 500
Score = 37.9 bits (84), Expect = 0.049
Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 3/90 (3%)
Query: 810 QTIKAAIMKMDATVIGREGIEKLLTMLPTEEEKVKIQEAQYANPDLPLGSAEQFLLTLAS 869
+ IK + D + E E LL +PT+EE + E +A+ L A+QF+ +A
Sbjct: 413 ERIKELVSHCDLAELPSEHAELLLKFVPTKEELAGLSE--HADEYDRLAEADQFMFQMAQ 470
Query: 870 INELSSRLKLWVFKLDFDNLEKEIAEPLMD 899
+ ++L + F FD L + P+M+
Sbjct: 471 VERYEAKLGVMTFIGVFDELMNSVI-PVME 499
>SB_52974| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 660
Score = 35.9 bits (79), Expect = 0.20
Identities = 31/118 (26%), Positives = 50/118 (42%), Gaps = 6/118 (5%)
Query: 502 DALKNGNQRYTAGLKQRIQNGTLGHSVSAVDALAAMRQKQLDSTPEAKDD--RGIIINRE 559
+ ++ +RY L R + + L M +DS + +D IIN E
Sbjct: 259 EEVRKYERRYETALASRTTDALADSFLKLTTKLVGMALP-IDSVVDLHNDIVSDYIINNE 317
Query: 560 HSIKDLAQRLTSPVSPTTEEK-PLRVSEMAGIVSKAKEELAKSQSKEVIKSPTIEKSQ 616
+ LA+R+TSP P T K P RV + + AK ++ V++SP + Q
Sbjct: 318 --LCTLAERITSPEPPATRPKHPGRVEAGGRLAKWNRINRAKKETLRVVQSPVASEPQ 373
>SB_40923| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.29)
Length = 690
Score = 33.9 bits (74), Expect = 0.79
Identities = 35/123 (28%), Positives = 54/123 (43%), Gaps = 8/123 (6%)
Query: 532 DALAAMRQKQLDSTPEAKD---DRGIIINREHSIKDLAQRLTSPVSPTTEEKPLRVSEMA 588
D A + +KQ T KD +R II E +K L ++ + K +E+
Sbjct: 432 DLTAMLDEKQAKYTSMLKDLKNERNKIIELEEKLKALEEQNSQRQEEYDSNKSTHENEL- 490
Query: 589 GIVSKAKEELAKSQSKEVIKSPTIEKSQKVHEIKVSENDIHWEELKKGCLNREFHLCDLD 648
+V KAK E ++K+ ++ EKS+K+ K E + EE KK E DL+
Sbjct: 491 -LVLKAKHEEELKETKQQLEELEKEKSEKL--TKEQEEALE-EERKKLTEANEKFAADLE 546
Query: 649 FSD 651
D
Sbjct: 547 AKD 549
>SB_17203| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2672
Score = 33.5 bits (73), Expect = 1.1
Identities = 32/110 (29%), Positives = 51/110 (46%), Gaps = 8/110 (7%)
Query: 536 AMRQKQLDSTPEAKDDRGIIINREHSIKDLAQRLTSPVSPTTEEKPLRVSEMAGIVSKAK 595
A+RQ+ +D T E + R N+ +KD+ QR +S +S + R SE + + K
Sbjct: 1287 ALRQELVDKTNEVEHLRNDFENQTLELKDVQQR-SSELSSRLDSLADRHSECRNLEFEVK 1345
Query: 596 EELAKSQSKEVIKSPTIEKSQKVHEIKV-SENDIHWE----ELKKGCLNR 640
K Q K++ + EKS IK E++ W ELK+ N+
Sbjct: 1346 N--LKDQMKQLEHALESEKSSNAALIKTYEEHESSWNHERCELKEQLANK 1393
>SB_37556| Best HMM Match : FH2 (HMM E-Value=6.1)
Length = 102
Score = 33.5 bits (73), Expect = 1.1
Identities = 19/94 (20%), Positives = 44/94 (46%), Gaps = 3/94 (3%)
Query: 876 RLKLWVFKLDFDNLEKEIAEPLMDLKQGIELLKVNKTFKVILSTLRSVGNFLN---GSHV 932
RLK FK F ++ + + + + +K + +L + + GN++N +
Sbjct: 8 RLKALFFKKKFPERMGDLKPKVQAVIMACKEVTRSKRIRTLLEVILAFGNYMNRGARGNA 67
Query: 933 KGFRLEYLSKVMEVKDTVHKHPLLYHICEMIIEK 966
GF+L L+++++ K + + L + ++EK
Sbjct: 68 TGFKLASLNRIVDTKSSANSRITLLNYLVTVLEK 101
>SB_8469| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 874
Score = 33.5 bits (73), Expect = 1.1
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 565 LAQRLTSPVSPTTEEK-PLRVSEMAGIVSKAKEELAKSQSKEVIKSPTIEKSQKVHEIKV 623
L +R+TSP P T K P RV + ++ AK ++ + ++SP +SQ ++
Sbjct: 209 LVERITSPEPPATRPKHPGRVEAGRRLAKWNRQNRAKKKAVQHVESPVASESQGREGLRA 268
Query: 624 SENDIH 629
IH
Sbjct: 269 RAEGIH 274
>SB_59712| Best HMM Match : SAP (HMM E-Value=3e-13)
Length = 1072
Score = 32.3 bits (70), Expect = 2.4
Identities = 26/102 (25%), Positives = 47/102 (46%), Gaps = 6/102 (5%)
Query: 512 TAGLKQRIQNGTLGHSVSAVDALAAMRQKQLDSTPEAKD-DRGIIINREHSIKDLAQRLT 570
T LK+ I + + HS A +AL ++ LD PE KD + +N+E+ +L +
Sbjct: 684 TESLKELIPDVQV-HSTPAFEALMDFGKEDLDYDPETKDQEEEAGLNKENKSNNLDEDQE 742
Query: 571 SPVSPTTEE----KPLRVSEMAGIVSKAKEELAKSQSKEVIK 608
P + E P R E V ++K ++ ++ + +K
Sbjct: 743 QPTAKEVESPEVTTPRRKRERVVKVEESKRKIKLNRQESEVK 784
>SB_59011| Best HMM Match : DUF1279 (HMM E-Value=0.51)
Length = 235
Score = 31.9 bits (69), Expect = 3.2
Identities = 22/88 (25%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 546 PEAKDDRGII-----INREHSIKDLAQRLTSPVSPTTEEKPLRVSEMAGIVSKAKEELAK 600
P DDR +I +R H+ +A R + V +E R+ E+ G+V+ +E +
Sbjct: 31 PFDPDDRELIPMTSTSSRMHAAHSMATRRVAEVDAVIQENTERIQELQGVVATDRETIDD 90
Query: 601 SQSKEVIKSPTIEKS-QKVHEIKVSEND 627
S E + E++ +++ EI E +
Sbjct: 91 PNSSESSRQEARERNEERLSEIDELERE 118
>SB_43487| Best HMM Match : K-box (HMM E-Value=0.79)
Length = 243
Score = 31.5 bits (68), Expect = 4.2
Identities = 29/97 (29%), Positives = 45/97 (46%), Gaps = 5/97 (5%)
Query: 281 YDQVDALQDQGMDDIIQLYMTKQGTDLDLLRQL--QIFEAVLLYEDGDESGTALQQLDES 338
+D++ L D+ D + + G +LD L++L Q+ EAV ED + Q DE
Sbjct: 142 FDKLQKLIDELEDVVKRKKEAIYGMELDKLQELIDQLEEAVKTKEDKVYGYEQVSQRDED 201
Query: 339 VIS--LVRRRSLNLNTSEMRKSKKQQMREKARPPVIT 373
S + ++N N E+R SK M K P +T
Sbjct: 202 YTSKDINNNNNINNNRREIR-SKLTAMERKRYPRYVT 237
>SB_43260| Best HMM Match : Gemini_mov (HMM E-Value=0.94)
Length = 294
Score = 31.5 bits (68), Expect = 4.2
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Query: 565 LAQRLTSPVSPTTEEK-PLRVSEMAGIVSKAKEELAKSQSKEVIKSPTIEKSQKVHEIKV 623
LA+R+TSP P T K P RV + + AK ++ V++SP + + ++
Sbjct: 38 LAERITSPEPPATRPKHPGRVEAGRRLAKWNRINRAKKEALRVVQSPVVPGPSEPQGLRA 97
Query: 624 SEND 627
+D
Sbjct: 98 RADD 101
>SB_36848| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 608
Score = 31.5 bits (68), Expect = 4.2
Identities = 33/145 (22%), Positives = 69/145 (47%), Gaps = 12/145 (8%)
Query: 233 VDGSAGYQPWHNIMKILQDFD--ASDTELLIYATTLINRCLNNVPDRDT--YYDQVDALQ 288
VD S G+Q + + Q D A+ ++L++ + + PD D + + +AL
Sbjct: 263 VDYSGGFQSFSTLRFGQQFVDRVANPKDILLFHRKKVQQAKGIRPDIDEKLLHLRPEALD 322
Query: 289 DQGMDDIIQLYMTKQ--GTDLDLLRQLQIFEAVLLYEDGDESGTALQ-----QLDESVIS 341
+ M+D+++ Y+ + DL +L + ++ +A+ + D DE A+Q QL+ +
Sbjct: 323 NTRMEDLVKDYLRSKDNALDLQILSENRMAQALREFVDKDEK-DAIQTLVSWQLEVTQKH 381
Query: 342 LVRRRSLNLNTSEMRKSKKQQMREK 366
L +R ++ E K ++R +
Sbjct: 382 LKQRNNVTAENIEEAAQKYTELRRQ 406
>SB_44820| Best HMM Match : 7tm_1 (HMM E-Value=9e-15)
Length = 456
Score = 31.5 bits (68), Expect = 4.2
Identities = 14/46 (30%), Positives = 26/46 (56%)
Query: 265 TLINRCLNNVPDRDTYYDQVDALQDQGMDDIIQLYMTKQGTDLDLL 310
T+ +C P D D+++A++D+ + IIQ Y + + L+LL
Sbjct: 41 TIKQKCTEGKPIEDMSLDELEAMEDEEDEAIIQRYSSAKHGSLELL 86
>SB_43856| Best HMM Match : Laminin_I (HMM E-Value=0.057)
Length = 976
Score = 31.5 bits (68), Expect = 4.2
Identities = 21/103 (20%), Positives = 42/103 (40%)
Query: 532 DALAAMRQKQLDSTPEAKDDRGIIINREHSIKDLAQRLTSPVSPTTEEKPLRVSEMAGIV 591
+ + MR K+ D +A + I+ +H Q+ S + E+ +S
Sbjct: 286 EVVEEMRVKEQDRIRQAVETERRIMESQHGSVTQLQQTLSEKNKELEQYRSALSSAKSQY 345
Query: 592 SKAKEELAKSQSKEVIKSPTIEKSQKVHEIKVSENDIHWEELK 634
+A++EL + + E +E + H ++V + EE K
Sbjct: 346 EQARDELQRVKESESHLCAELESIESAHRVQVERLEREKEEFK 388
>SB_43343| Best HMM Match : fn3 (HMM E-Value=3.4e-39)
Length = 2865
Score = 31.5 bits (68), Expect = 4.2
Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 556 INREHSIKDLAQRLTSPVSPTTEEKPLRVSEMAGIVSKAKEELAKSQSKEVIKSPTIEKS 615
+NR D +RLT+ E K L + I + K+ AK S E+ PTI ++
Sbjct: 2468 VNRFKKADDAKERLTNE---RKELKALLIEFNVKIHNTVKQLRAKHLS-ELKAMPTILRN 2523
Query: 616 QKVHEIKVSENDIHWEELKKG 636
++ + +EN HW++ ++G
Sbjct: 2524 RQGQLVTKTENISHWQKARRG 2544
>SB_41880| Best HMM Match : TolA (HMM E-Value=2.2)
Length = 374
Score = 31.5 bits (68), Expect = 4.2
Identities = 32/169 (18%), Positives = 73/169 (43%), Gaps = 5/169 (2%)
Query: 494 TTRSLNQTDALKNGNQRYTAGLKQRIQNGTLGHSVSAVDALAAMRQKQLDSTPEAKDDRG 553
T+ + D+ K ++ L+ ++ + SV + A+R Q + E +++
Sbjct: 146 TSGAEEHPDSKKKQKRKSKEDLQPSRRSNRIHESVRKREIEEAVRIAQEEMRREREEEEN 205
Query: 554 IIINREHSIKDLAQRLTSPVSPTTEEKPLRVSEMAGIVSKAKEELAKSQSKEVIKSPTIE 613
I+ E +K + + EEK + E + + + E+ + ++ E+ T E
Sbjct: 206 RILEEEERVK---REEEEKKAKEVEEKRMGEDEEQIKLKEEEVEIKEDKTAELELEETTE 262
Query: 614 KSQKVHEIKVSENDIHWEELKKGCL--NREFHLCDLDFSDLRHDSEDDM 660
KS +S + IH ++ +K N+E ++ + D++ + E D+
Sbjct: 263 KSNHAKRENLSPSKIHKKDREKTPTKKNKEKNVKKNEEKDVQKEEEKDV 311
>SB_19404| Best HMM Match : Pkinase (HMM E-Value=0.00019)
Length = 372
Score = 31.5 bits (68), Expect = 4.2
Identities = 17/58 (29%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 772 SRTNDLIIKKLMEPKRNLILDAK-RSNAINIAMKKLPTPQTIKAAIMKMDATVIGREG 828
S T DLI K L++ + N ++ R ++ + +LP P T+++ + + T +GR G
Sbjct: 128 SATPDLINKSLLKDQNNSYSKSEGRRSSSTSSSPRLPRPPTVESQSVSIKETEVGRPG 185
>SB_44114| Best HMM Match : RRM_1 (HMM E-Value=9.9e-35)
Length = 929
Score = 31.1 bits (67), Expect = 5.6
Identities = 28/108 (25%), Positives = 51/108 (47%), Gaps = 4/108 (3%)
Query: 275 PDRDTYYDQVDALQDQGMDDIIQLYMTKQG--TDLDLLRQLQIFEAVLLYEDGDESGTAL 332
P R Y V+ L + ++ Y K G T D ++ +I E V+ +E D+ TA+
Sbjct: 793 PVRTNYSVIVENLSSRTSWQDLKDYFRKYGKVTYADAHKK-RIGEGVVEFESKDDLNTAI 851
Query: 333 QQLDESVISLVRRRSLNLNTSEMRKSKKQQMREKARPPVITHPEPETK 380
++LD++ + R R + S +++ + KA P+ + P P K
Sbjct: 852 EKLDDTELGGRRIRVYEIRISSIKRRYRLYQVFKA-SPIFSVPPPFRK 898
>SB_26915| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3934
Score = 31.1 bits (67), Expect = 5.6
Identities = 23/101 (22%), Positives = 49/101 (48%), Gaps = 4/101 (3%)
Query: 528 VSAVDALAAMRQKQLDSTPEAKDDRGIIINREHSIKDLA---QRLTSPVSPTTEEKPLRV 584
V + AL + + ++ ++ + ++ G + RE I L +R P T KP+ V
Sbjct: 962 VQTLLALESAQVERQEALRQNEELAGELDKREQEISTLIMEIEREKKPAEANTSPKPVLV 1021
Query: 585 SEMAGIVSKAKE-ELAKSQSKEVIKSPTIEKSQKVHEIKVS 624
SE+ V +A + + K Q+ + ++ I K +++ +K +
Sbjct: 1022 SELWSSVQEATQTKEEKEQTHKALEQELIVKQREILNLKTA 1062
>SB_24923| Best HMM Match : rve (HMM E-Value=1.5e-11)
Length = 1445
Score = 31.1 bits (67), Expect = 5.6
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Query: 565 LAQRLTSPVSPTTEEK-PLRVSEMAGIVSKAKEELAKSQSKEVIKSPTIEKSQ 616
LA+R+TSP P T K P RV + + AK ++ + I+SP +SQ
Sbjct: 1015 LAERITSPEPPATRPKHPGRVEAGRRLAKWNRLNRAKKKAVQHIESPVASESQ 1067
>SB_56618| Best HMM Match : DUF1213 (HMM E-Value=0.022)
Length = 1421
Score = 30.7 bits (66), Expect = 7.4
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 578 EEKPLRVSEMAGIVSKAKEELAKSQSKEVIKSPTIEKSQKVHEIKVSENDI 628
E K +S++A +VS+ K + + K+ K T +KS K EI V N+I
Sbjct: 959 EVKKNDLSDLASLVSRNKPSAKEKEKKDTKKKKT-QKSAKKKEITVDPNNI 1008
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 30.7 bits (66), Expect = 7.4
Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 7/81 (8%)
Query: 569 LTSPVS-PTTEEKPLRVSEMAGIVSKAKEELAKSQSKEVIKSPTIEKSQKV-HEIKVSEN 626
L S +S P K +V E I+ KEE +Q+KE I E + H+IK+ ++
Sbjct: 200 LNSTLSVPLESIKLQKVQEAEAILMSLKEEFDNTQNKEKISKLWEEFDSLIPHQIKIKDS 259
Query: 627 DIHWEELKKGCLNREFHLCDL 647
++ KG + + +LC L
Sbjct: 260 TVN-----KGLIAEKQNLCQL 275
>SB_25653| Best HMM Match : U-box (HMM E-Value=0.0064)
Length = 336
Score = 30.7 bits (66), Expect = 7.4
Identities = 15/49 (30%), Positives = 25/49 (51%)
Query: 563 KDLAQRLTSPVSPTTEEKPLRVSEMAGIVSKAKEELAKSQSKEVIKSPT 611
K LA + +P+ E+ PLRV KE+ A +++ + + SPT
Sbjct: 202 KRLAHAIAKKSTPSVEKLPLRVETFLWCTEAFKEKAASARAGQPLTSPT 250
>SB_19183| Best HMM Match : SOUL (HMM E-Value=2.1)
Length = 442
Score = 30.7 bits (66), Expect = 7.4
Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 6/86 (6%)
Query: 561 SIKDLAQRLTSPVSPTTEEK-PLRVSEMAGIVSKAKEELAKSQSKEV---IKSPTIEKSQ 616
++ LA+R+TSP P T K P RV + + AK ++ V ++SP +SQ
Sbjct: 123 TLSALAERITSPEPPPTRPKHPGRVEAGRRLAKWNRINRAKKEALRVVQRVESPVAGESQ 182
Query: 617 KVHEIKVSENDIHW--EELKKGCLNR 640
+ ++ IH E C +R
Sbjct: 183 GLEGLRARAEGIHTPVPESNSACASR 208
>SB_18496| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 186
Score = 30.7 bits (66), Expect = 7.4
Identities = 15/49 (30%), Positives = 25/49 (51%)
Query: 563 KDLAQRLTSPVSPTTEEKPLRVSEMAGIVSKAKEELAKSQSKEVIKSPT 611
K LA + +P+ E+ PLRV KE+ A +++ + + SPT
Sbjct: 52 KRLAHAIAKKSTPSVEKLPLRVETFLWCTEAFKEKAASARAGQPLTSPT 100
>SB_55326| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1289
Score = 30.7 bits (66), Expect = 7.4
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Query: 548 AKDDRGIIINREHSIKDLAQRLTSPVSPTTEEK-PLRVSEMAGIVSKAKEELAKSQSKEV 606
A+ D+ E + LA+R+TSP P T+ K P RV + + AK + +
Sbjct: 375 AEPDKQAAHEPERTPSALAERITSPEPPATQPKHPGRVEAGGRLAELNRLSRAKKIATQH 434
Query: 607 IKSPTIEKSQ 616
++SP + Q
Sbjct: 435 VESPVASEPQ 444
>SB_18529| Best HMM Match : DUF1388 (HMM E-Value=3.5)
Length = 435
Score = 30.7 bits (66), Expect = 7.4
Identities = 15/44 (34%), Positives = 23/44 (52%)
Query: 345 RRSLNLNTSEMRKSKKQQMREKARPPVITHPEPETKIANNQRTS 388
+ S TS K+K ++ R+ ARP T P +TK + +TS
Sbjct: 18 KTSRKTKTSHKTKTKPKRPRQAARPSCKTKPSRKTKTSRKTKTS 61
>SB_9925| Best HMM Match : Kinesin (HMM E-Value=0.00094)
Length = 1671
Score = 30.7 bits (66), Expect = 7.4
Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Query: 323 EDGDESGTALQQLDESVISLVRRRSLNLNTSEMRKSKKQQMREKARPPVITHPEPETKIA 382
E GD + D + S R + LN S +KSKK ++E + P V P P + A
Sbjct: 46 EHGDRGLLYARPEDGNSTSFFHRAAQKLNLSSKKKSKKHHVKESS-PAVHDAPVPSPRHA 104
Query: 383 NNQRTSF 389
+ + +
Sbjct: 105 QKESSPY 111
>SB_23213| Best HMM Match : SH3_1 (HMM E-Value=9.2e-12)
Length = 979
Score = 30.3 bits (65), Expect = 9.8
Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Query: 968 PDSTDFFSEVGPVIRASKVDFDILSVNLQKLESDCKASW-DHMKRVAKHDSSQIFKTKIN 1026
PD D S + P ++A+ + + L L + E D W DH KR+ + F+ +I
Sbjct: 69 PDKNDENSNMTPDVKANTTELEGLLQRLYQSEEDFGKFWVDHEKRIRQGLEFSFFEQEIG 128
Query: 1027 E 1027
+
Sbjct: 129 Q 129
>SB_20121| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2306
Score = 30.3 bits (65), Expect = 9.8
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 1117 YSNKNGDHTADHALKELLKTDPDTDSLTEGRRKSQASTNRMLVNGDLSADDEI 1169
+SN + D + D K+ + D D D TE R+ S+ N + + D++A +EI
Sbjct: 2145 HSNYSTDRSVDEISKKGMVVDGDQDITTESRKSSK--NNYINLGEDINAREEI 2195
>SB_10355| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0037)
Length = 1127
Score = 30.3 bits (65), Expect = 9.8
Identities = 29/107 (27%), Positives = 49/107 (45%), Gaps = 11/107 (10%)
Query: 829 IEKLLTMLPTEEEKVKIQEAQYANPDLPLGSAEQFLLTL--------ASINELSSRLKLW 880
+ +L L +K K Q A+ + +G E L+ A+INEL+S+L
Sbjct: 361 VRELQNELVISRKKCKDQGAEISRQSSHIGKLEATKLSQETNIRSLKANINELNSKLSK- 419
Query: 881 VFKLDFDNLEKEIAEPLMDLKQGIELLKVNKTFKVILSTLRSVGNFL 927
++ D++ LEK+ M+ + I+ LK + KV L G +L
Sbjct: 420 -YEGDYEELEKQYKTHFMESGEHIQSLK-EEISKVTAQKLEIEGKYL 464
>SB_9088| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 884
Score = 30.3 bits (65), Expect = 9.8
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Query: 565 LAQRLTSPVSPTTEEK-PLRVSEMAGIVSKAKEELAKSQSKEVIKSPTIEKSQKVHEIKV 623
L +RLTSP P T K P RV + + AK ++ + ++SP +SQ ++
Sbjct: 286 LVERLTSPEPPATRPKHPGRVEAGRRLAEWNRLNRAKKKAVQHVESPVASESQGREGLRA 345
Query: 624 SEND 627
D
Sbjct: 346 RAED 349
>SB_48686| Best HMM Match : rve (HMM E-Value=1.2e-19)
Length = 722
Score = 30.3 bits (65), Expect = 9.8
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Query: 565 LAQRLTSPVSPTTEEK-PLRVSEMAGIVSKAKEELAKSQSKEVIKSPTIEKSQKVHEIKV 623
L +RLTSP P T K P RV + + AK ++ + ++SP +SQ ++
Sbjct: 286 LVERLTSPEPPATRPKHPGRVEAGRRLAEWNRLNRAKKKAVQHVESPVASESQGREGLRA 345
Query: 624 SEND 627
D
Sbjct: 346 RAED 349
>SB_42227| Best HMM Match : SDA1 (HMM E-Value=0.66)
Length = 806
Score = 30.3 bits (65), Expect = 9.8
Identities = 15/43 (34%), Positives = 23/43 (53%)
Query: 903 GIELLKVNKTFKVILSTLRSVGNFLNGSHVKGFRLEYLSKVME 945
G+E K +KV +R++ N++ HV R+E SKV E
Sbjct: 151 GVETATAKKIYKVWFKIIRNLTNYVFLKHVLRVRIEINSKVKE 193
>SB_36474| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1608
Score = 30.3 bits (65), Expect = 9.8
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 560 HSIKDLAQRLTSPVSPTTEEK-PLRVSEMAGIVSKAKEELAKSQSKEVIKSPTIEKSQ 616
H+ L +R+TSP P T K P RV + + AK ++ + ++SP +SQ
Sbjct: 963 HTPSALMERITSPEPPATRPKHPGRVEAGRRLAKWNRLNRAKKKAVQHVESPVASESQ 1020
>SB_18162| Best HMM Match : E-MAP-115 (HMM E-Value=0.21)
Length = 659
Score = 30.3 bits (65), Expect = 9.8
Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Query: 1070 SEFLKVIAEFALEYRTTRERVQQQMEKR-ANHRERNKTRGKMIIDVGNY-SNKNGDHTAD 1127
+E L +AE A ++ ER Q+ +R ++ R RNK R +M G Y + A
Sbjct: 483 AEELAKLAELAGAHKRYAERSQETARRRRSSRRRRNKKRLQMGAAPGQYHKHPRVVLQAA 542
Query: 1128 HALKEL--LKTDPDT 1140
H +E LKTD DT
Sbjct: 543 HVQQEAGGLKTDADT 557
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.317 0.133 0.377
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,257,269
Number of Sequences: 59808
Number of extensions: 1421558
Number of successful extensions: 4956
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 4910
Number of HSP's gapped (non-prelim): 72
length of query: 1199
length of database: 16,821,457
effective HSP length: 90
effective length of query: 1109
effective length of database: 11,438,737
effective search space: 12685559333
effective search space used: 12685559333
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 65 (30.3 bits)
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