GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000615-TA|BGIBMGA000615-PA|IPR003104|Actin-binding FH2
         (1199 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ302655-1|CAC35520.1|  332|Anopheles gambiae gSG5 protein protein.    27   2.9  
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           27   3.9  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    26   5.1  
AF387857-1|AAL58707.1|  215|Anopheles gambiae integrase protein.       26   5.1  
AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    25   9.0  

>AJ302655-1|CAC35520.1|  332|Anopheles gambiae gSG5 protein protein.
          Length = 332

 Score = 27.1 bits (57), Expect = 2.9
 Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 2/73 (2%)

Query: 887 DNLEKEIAEPLMDLKQGIELLKVNKTFKVILSTLRSVGNFLNGSHVKGFRLEYLSKVME- 945
           + LE E   P M + Q I    + + F+ + +   S+  F  G HV+G  +   S++M  
Sbjct: 80  EKLENETDIPRM-VVQNISRPNLGELFQKLTTGFFSLNLFQIGQHVRGVLVSIKSRMMAY 138

Query: 946 VKDTVHKHPLLYH 958
             D V K   L H
Sbjct: 139 TNDAVAKFEHLRH 151


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 26.6 bits (56), Expect = 3.9
 Identities = 17/56 (30%), Positives = 27/56 (48%)

Query: 745  RPKVGGFIWDDLPSIDLDTAMLEHLFESRTNDLIIKKLMEPKRNLILDAKRSNAIN 800
            R K+   ++ DLP  DLD  M  +L  +   +   KK  +  R  +   K+SN +N
Sbjct: 1161 RRKLIIILYGDLPQRDLDADMRLYLRTNTCIEWDDKKFWQKLRIALPHVKKSNCLN 1216


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 26.2 bits (55), Expect = 5.1
 Identities = 15/60 (25%), Positives = 22/60 (36%)

Query: 468 NGSLNGNHYANGVNGHLDDEEPYANRTTRSLNQTDALKNGNQRYTAGLKQRIQNGTLGHS 527
           N   +GN+  NGV  H     P    T ++ N  +   N      A +     N  L +S
Sbjct: 68  NTGNSGNNNNNGVGNHQQQPSPVNEGTGKTNNNNNNNNNNGSNTGATVNSGSSNAALSNS 127


>AF387857-1|AAL58707.1|  215|Anopheles gambiae integrase protein.
          Length = 215

 Score = 26.2 bits (55), Expect = 5.1
 Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 1/36 (2%)

Query: 52  RQPSIDSGIVDYE-DFAIPDMDPQEFSDKEDFQDPV 86
           R    +  IV+YE D  +P  D  +F D  DF D V
Sbjct: 79  RSKKTNPQIVEYEFDDDLPFDDDSDFDDDSDFDDDV 114


>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 25.4 bits (53), Expect = 9.0
 Identities = 18/70 (25%), Positives = 28/70 (40%), Gaps = 5/70 (7%)

Query: 319 VLLYEDGDESGTALQQLDESVISLVRRRSLNLNTSEMRKSKKQQMREKARPPVITHPEPE 378
           V+  EDGD     L+     VI L  + S      + RK +    R+   PP +  P   
Sbjct: 517 VVTVEDGDGQYVVLE-----VIQLQDKDSKAAGMEKSRKKRGAPKRKATSPPAVATPPST 571

Query: 379 TKIANNQRTS 388
           ++     RT+
Sbjct: 572 SRARTATRTA 581


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.317    0.133    0.377 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,071,855
Number of Sequences: 2123
Number of extensions: 42132
Number of successful extensions: 111
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 108
Number of HSP's gapped (non-prelim): 6
length of query: 1199
length of database: 516,269
effective HSP length: 72
effective length of query: 1127
effective length of database: 363,413
effective search space: 409566451
effective search space used: 409566451
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 53 (25.4 bits)