GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000614-TA|BGIBMGA000614-PA|undefined
         (511 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    25   1.7  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    25   1.7  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    23   6.7  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    23   6.7  
DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory pro...    22   8.8  

>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 24.6 bits (51), Expect = 1.7
 Identities = 11/35 (31%), Positives = 21/35 (60%), Gaps = 1/35 (2%)

Query: 467 MDSILARRTGQTLLDED-VCEEIDPTQVRIHDSTA 500
           +D +L  +  + L+D++ + EE+D      HD+TA
Sbjct: 284 LDLLLTAKNKEGLIDDEGIREEVDTFMFEGHDTTA 318


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 24.6 bits (51), Expect = 1.7
 Identities = 11/35 (31%), Positives = 21/35 (60%), Gaps = 1/35 (2%)

Query: 467 MDSILARRTGQTLLDED-VCEEIDPTQVRIHDSTA 500
           +D +L  +  + L+D++ + EE+D      HD+TA
Sbjct: 284 LDLLLTAKNKEGLIDDEGIREEVDTFMFEGHDTTA 318


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 22.6 bits (46), Expect = 6.7
 Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 1/35 (2%)

Query: 467 MDSILARRT-GQTLLDEDVCEEIDPTQVRIHDSTA 500
           +D +L  ++ G  + DE + EE+D      HD+T+
Sbjct: 270 LDLLLKYKSEGANIDDEGIREEVDTFMFEGHDTTS 304


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 22.6 bits (46), Expect = 6.7
 Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 1/35 (2%)

Query: 467 MDSILARRT-GQTLLDEDVCEEIDPTQVRIHDSTA 500
           +D +L  ++ G  + DE + EE+D      HD+T+
Sbjct: 270 LDLLLKYKSEGANIDDEGIREEVDTFMFEGHDTTS 304


>DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory
           protein 17 protein.
          Length = 124

 Score = 22.2 bits (45), Expect = 8.8
 Identities = 6/18 (33%), Positives = 12/18 (66%)

Query: 200 KNIPKMIRHVESGERAWW 217
           + + K+IRH+   + +WW
Sbjct: 80  EGVRKVIRHLIKNKPSWW 97


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.309    0.127    0.372 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,930
Number of Sequences: 317
Number of extensions: 4670
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 4
Number of HSP's gapped (non-prelim): 5
length of query: 511
length of database: 114,650
effective HSP length: 60
effective length of query: 451
effective length of database: 95,630
effective search space: 43129130
effective search space used: 43129130
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 45 (22.2 bits)