GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000613-TA|BGIBMGA000613-PA|IPR002928|Myosin tail,
IPR009053|Prefoldin
         (664 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...    27   0.41 
X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.       26   0.95 
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    26   0.95 
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    26   0.95 
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    26   0.95 
DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory pro...    23   8.9  

>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score = 27.1 bits (57), Expect = 0.41
 Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 7/78 (8%)

Query: 456 ITKELRIADERYQRVQTELKHTVEHLHEEQERIVKIEAVKKSLEIEVKNISVRLEEVEAN 515
           +T E  +AD  +    T  K   E L+ +Q  +  ++ VKK LE    +  +  ++++  
Sbjct: 109 LTIENLLADYDFSETLTRAKF--EELNNDQF-LKTLKPVKKVLE----DADMTKDQIDEI 161

Query: 516 AIVGGKRIISKLEARIKD 533
            +VGG   I K++  IKD
Sbjct: 162 VLVGGSTRIPKIQQLIKD 179


>X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.
          Length = 133

 Score = 25.8 bits (54), Expect = 0.95
 Identities = 12/38 (31%), Positives = 21/38 (55%)

Query: 455 EITKELRIADERYQRVQTELKHTVEHLHEEQERIVKIE 492
           ++ KELR   E  ++ + E +    H  ++QE+  KIE
Sbjct: 60  KLKKELRAVKEINEQARREREEQERHKQQQQEKQQKIE 97


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 25.8 bits (54), Expect = 0.95
 Identities = 12/34 (35%), Positives = 22/34 (64%)

Query: 472 TELKHTVEHLHEEQERIVKIEAVKKSLEIEVKNI 505
           TEL  ++E L E   + ++IE V+++L  E+K +
Sbjct: 742 TELSKSLEGLLENVAQYLQIENVEQTLNHEIKKV 775


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 25.8 bits (54), Expect = 0.95
 Identities = 12/38 (31%), Positives = 21/38 (55%)

Query: 455 EITKELRIADERYQRVQTELKHTVEHLHEEQERIVKIE 492
           ++ KELR   E  ++ + E +    H  ++QE+  KIE
Sbjct: 211 KLKKELRAVKEINEQARREREEQERHKQQQQEKQQKIE 248


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 25.8 bits (54), Expect = 0.95
 Identities = 12/38 (31%), Positives = 21/38 (55%)

Query: 455 EITKELRIADERYQRVQTELKHTVEHLHEEQERIVKIE 492
           ++ KELR   E  ++ + E +    H  ++QE+  KIE
Sbjct: 270 KLKKELRAVKEINEQARREREEQERHKQQQQEKQQKIE 307


>DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory
           protein 4 protein.
          Length = 133

 Score = 22.6 bits (46), Expect = 8.9
 Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 4/62 (6%)

Query: 297 SSKQTSIEIEQLNARVVEAETKLKSEVTRIKKKLQIQITELELSLDVANKTNIDLQKTIK 356
           ++K  +I++E     VV+ E  LKS V  + +K +     LEL  ++ +    D  K  +
Sbjct: 27  TTKYDNIDLEN----VVKNERLLKSYVDCLLEKGRCSPDGLELKKNMPDAIETDCSKCSE 82

Query: 357 KQ 358
           KQ
Sbjct: 83  KQ 84


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.311    0.127    0.331 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,744
Number of Sequences: 317
Number of extensions: 4395
Number of successful extensions: 17
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 13
Number of HSP's gapped (non-prelim): 6
length of query: 664
length of database: 114,650
effective HSP length: 61
effective length of query: 603
effective length of database: 95,313
effective search space: 57473739
effective search space used: 57473739
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 46 (22.6 bits)