GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000612-TA|BGIBMGA000612-PA|IPR002928|Myosin tail,
IPR009053|Prefoldin
         (512 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...    29   0.077
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    23   5.1  
Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor ...    23   6.7  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   6.7  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    23   6.7  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     22   8.8  

>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score = 29.1 bits (62), Expect = 0.077
 Identities = 27/102 (26%), Positives = 47/102 (46%), Gaps = 3/102 (2%)

Query: 93  DTELLKLRKLLEDVHLESEETAHLLKKKNQEIVID-FQEQIDQLTKTKARAEKEK-SKFQ 150
           D  +L +   + +V   S +T HL  +   + V+D F + + Q  K   RA+K+   K +
Sbjct: 33  DVSILTIDNGVFEVVATSGDT-HLGGEDFDQKVMDYFIKMVKQKHKKDIRADKKALQKLR 91

Query: 151 AEVYELLAQVENVTKEKITISKTCERLEITISELHIKIEELN 192
            EV +    + +V K  +TI       + + +    K EELN
Sbjct: 92  REVEKAKRDLSSVHKTTLTIENLLADYDFSETLTRAKFEELN 133


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 23.0 bits (47), Expect = 5.1
 Identities = 11/43 (25%), Positives = 20/43 (46%)

Query: 186 IKIEELNRTIVDITSHKQRLSQENIELVKEVQDLKVNIENVVY 228
           ++ +ELNR I+D  S          E + ++ +  VN  N  +
Sbjct: 176 MRYKELNRVILDNMSRNHLFLVRRTETLAQILNQTVNFYNSAF 218


>Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor
           5-like protein protein.
          Length = 162

 Score = 22.6 bits (46), Expect = 6.7
 Identities = 9/22 (40%), Positives = 12/22 (54%)

Query: 412 ELDKTREQKDALARENKKMGDD 433
           ++D   E  +A   EN K GDD
Sbjct: 93  QVDDQNESLEASVNENSKNGDD 114


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 6.7
 Identities = 12/38 (31%), Positives = 21/38 (55%), Gaps = 1/38 (2%)

Query: 169 TISKTCERLEITISELHIKIE-ELNRTIVDITSHKQRL 205
           T+ K  + LE+    +H   + + N T++D   HK+RL
Sbjct: 96  TLLKKDKLLELFKRLIHFDTKCQENSTVIDYKRHKKRL 133


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 22.6 bits (46), Expect = 6.7
 Identities = 12/38 (31%), Positives = 21/38 (55%), Gaps = 1/38 (2%)

Query: 169 TISKTCERLEITISELHIKIE-ELNRTIVDITSHKQRL 205
           T+ K  + LE+    +H   + + N T++D   HK+RL
Sbjct: 114 TLLKKDKLLELFKRLIHFDTKCQENSTVIDYKRHKKRL 151


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 22.2 bits (45), Expect = 8.8
 Identities = 12/41 (29%), Positives = 19/41 (46%)

Query: 76  EEAEGGAESQFEINRKRDTELLKLRKLLEDVHLESEETAHL 116
           E    GAE   +I  +RD   L+   LL + +  S   +H+
Sbjct: 74  ENGHMGAEFPLDIMMRRDMSRLEKSPLLANGYNHSPHLSHM 114


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.309    0.126    0.318 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,403
Number of Sequences: 317
Number of extensions: 2327
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 3
Number of HSP's gapped (non-prelim): 6
length of query: 512
length of database: 114,650
effective HSP length: 60
effective length of query: 452
effective length of database: 95,630
effective search space: 43224760
effective search space used: 43224760
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 45 (22.2 bits)