GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000612-TA|BGIBMGA000612-PA|IPR002928|Myosin tail,
IPR009053|Prefoldin
         (512 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY569700-1|AAS86653.1|  407|Apis mellifera complementary sex det...    31   0.023
AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex det...    29   0.12 
AY569703-1|AAS86656.1|  396|Apis mellifera complementary sex det...    28   0.16 
AY569701-1|AAS86654.1|  407|Apis mellifera complementary sex det...    28   0.16 
AY569699-1|AAS86652.1|  396|Apis mellifera complementary sex det...    28   0.16 
AY569696-1|AAS86649.1|  414|Apis mellifera complementary sex det...    28   0.16 
AY569695-1|AAS86648.1|  414|Apis mellifera complementary sex det...    28   0.16 
AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex det...    28   0.21 
AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex det...    28   0.21 
AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex det...    28   0.21 
AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex det...    27   0.28 
AY352276-1|AAQ67417.1|  385|Apis mellifera complementary sex det...    27   0.49 
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    23   6.0  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    23   8.0  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    23   8.0  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    23   8.0  

>AY569700-1|AAS86653.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 31.1 bits (67), Expect = 0.023
 Identities = 20/97 (20%), Positives = 45/97 (46%), Gaps = 4/97 (4%)

Query: 332 LIAKINNVEKQKSRLQSEVEVLIIDLEKANGTARELQKRTEQLERVNIEIKSRLEETVQL 391
           ++ KIN +E+Q + L   +E    + +K   ++  L+ RT   +  +    SR       
Sbjct: 182 VLTKINKIEEQDTVLVVNIEKSGKESKKYATSSNSLRNRTHGFQHTS----SRYSRERSC 237

Query: 392 YEQTQRDLRNKQTELQRVSHELDKTREQKDALARENK 428
                R+ R K  + +++ +E +K  E++ +  R ++
Sbjct: 238 SRDRNREYRKKDRQYEKLHNEKEKLLEERTSRKRYSR 274


>AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 28.7 bits (61), Expect = 0.12
 Identities = 17/97 (17%), Positives = 44/97 (45%), Gaps = 3/97 (3%)

Query: 335 KINNVEKQKSRLQSEVEVLIIDLEKANGTARELQKRTEQLERVN---IEIKSRLEETVQL 391
           +I NV  + ++++    VL++++EK+   +++    +  L           SR       
Sbjct: 167 EIKNVLTKINKIKEHDTVLVVNIEKSENESKKYATSSNSLRNRTHGFQHTSSRYSRERSC 226

Query: 392 YEQTQRDLRNKQTELQRVSHELDKTREQKDALARENK 428
                R+ R K  + +++ +E +K  E++ +  R ++
Sbjct: 227 SRDRNREYRKKDRQYEKLHNEKEKLLEERTSRKRYSR 263


>AY569703-1|AAS86656.1|  396|Apis mellifera complementary sex
           determiner protein.
          Length = 396

 Score = 28.3 bits (60), Expect = 0.16
 Identities = 17/97 (17%), Positives = 44/97 (45%), Gaps = 3/97 (3%)

Query: 335 KINNVEKQKSRLQSEVEVLIIDLEKANGTARELQKRTEQLERVN---IEIKSRLEETVQL 391
           +I NV  + ++++    VL++++EK+   +++    +  L           SR       
Sbjct: 167 EIKNVLTKINKIEEHDTVLVVNIEKSGKESKKYATSSNSLRNRTHGFQHTSSRYSRERSC 226

Query: 392 YEQTQRDLRNKQTELQRVSHELDKTREQKDALARENK 428
                R+ R K  + +++ +E +K  E++ +  R ++
Sbjct: 227 SRDRNREYRKKDRQYEKLHNEKEKLLEERTSRKRYSR 263


>AY569701-1|AAS86654.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 28.3 bits (60), Expect = 0.16
 Identities = 17/97 (17%), Positives = 44/97 (45%), Gaps = 3/97 (3%)

Query: 335 KINNVEKQKSRLQSEVEVLIIDLEKANGTARELQKRTEQLERVN---IEIKSRLEETVQL 391
           +I NV  + ++++    VL++++EK+   +++    +  L           SR       
Sbjct: 178 EIKNVLTKINKIEEHDTVLVVNIEKSGKESKKYATSSNSLRNRTHGFQHTSSRYSRERSC 237

Query: 392 YEQTQRDLRNKQTELQRVSHELDKTREQKDALARENK 428
                R+ R K  + +++ +E +K  E++ +  R ++
Sbjct: 238 SRDRNREYRKKDRQYEKLHNEKEKLLEERTSRKRYSR 274


>AY569699-1|AAS86652.1|  396|Apis mellifera complementary sex
           determiner protein.
          Length = 396

 Score = 28.3 bits (60), Expect = 0.16
 Identities = 17/97 (17%), Positives = 44/97 (45%), Gaps = 3/97 (3%)

Query: 335 KINNVEKQKSRLQSEVEVLIIDLEKANGTARELQKRTEQLERVN---IEIKSRLEETVQL 391
           +I NV  + ++++    VL++++EK+   +++    +  L           SR       
Sbjct: 167 EIKNVLTKINKIEEHDTVLVVNIEKSGKESKKYATSSNSLRNRTHGFQHTSSRYSRERSC 226

Query: 392 YEQTQRDLRNKQTELQRVSHELDKTREQKDALARENK 428
                R+ R K  + +++ +E +K  E++ +  R ++
Sbjct: 227 SRDRNREYRKKDRQYEKLHNEKEKLLEERTSRKRYSR 263


>AY569696-1|AAS86649.1|  414|Apis mellifera complementary sex
           determiner protein.
          Length = 414

 Score = 28.3 bits (60), Expect = 0.16
 Identities = 18/97 (18%), Positives = 46/97 (47%), Gaps = 3/97 (3%)

Query: 335 KINNVEKQKSRLQSEVEVLIIDLEKANGTARELQKRTEQL-ERVN--IEIKSRLEETVQL 391
           +I NV  + ++++    VL++++EK+   +++    +  L  R +      SR       
Sbjct: 178 EIKNVLTKINKIKEHDTVLVVNIEKSGNESKKYATSSNSLRSRTHGFQHTSSRYSRERSC 237

Query: 392 YEQTQRDLRNKQTELQRVSHELDKTREQKDALARENK 428
                R+ R K  + +++ +E +K  E++ +  R ++
Sbjct: 238 SRDRNREYRKKDRQYEKLHNEKEKFLEERTSRKRYSR 274


>AY569695-1|AAS86648.1|  414|Apis mellifera complementary sex
           determiner protein.
          Length = 414

 Score = 28.3 bits (60), Expect = 0.16
 Identities = 18/97 (18%), Positives = 46/97 (47%), Gaps = 3/97 (3%)

Query: 335 KINNVEKQKSRLQSEVEVLIIDLEKANGTARELQKRTEQL-ERVN--IEIKSRLEETVQL 391
           +I NV  + ++++    VL++++EK+   +++    +  L  R +      SR       
Sbjct: 178 EIKNVLTKINKIKEHDTVLVVNIEKSGNESKKYATSSNSLRSRTHGFQHTSSRYSRERSC 237

Query: 392 YEQTQRDLRNKQTELQRVSHELDKTREQKDALARENK 428
                R+ R K  + +++ +E +K  E++ +  R ++
Sbjct: 238 SRDRNREYRKKDRQYEKLHNEKEKFLEERTSRKRYSR 274


>AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex
           determiner protein.
          Length = 413

 Score = 27.9 bits (59), Expect = 0.21
 Identities = 17/97 (17%), Positives = 43/97 (44%), Gaps = 3/97 (3%)

Query: 335 KINNVEKQKSRLQSEVEVLIIDLEKANGTARELQKRTEQLERVN---IEIKSRLEETVQL 391
           +I NV  + ++++    VL++++EK+   +++    +  L           SR       
Sbjct: 178 EIKNVLTKINKIKEHDTVLVVNIEKSGNESKKYATSSNSLRNRTHGFQHTSSRYSRERSC 237

Query: 392 YEQTQRDLRNKQTELQRVSHELDKTREQKDALARENK 428
                R+ R K    +++ +E +K  E++ +  R ++
Sbjct: 238 SRDRNREYRKKDRRYEKLHNEKEKLLEERTSRKRYSR 274


>AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex
           determiner protein.
          Length = 418

 Score = 27.9 bits (59), Expect = 0.21
 Identities = 17/97 (17%), Positives = 43/97 (44%), Gaps = 3/97 (3%)

Query: 335 KINNVEKQKSRLQSEVEVLIIDLEKANGTARELQKRTEQLERVN---IEIKSRLEETVQL 391
           +I NV  + ++++    VL++++EK+   +++    +  L           SR       
Sbjct: 183 EIKNVLTKINKIKEHDTVLVVNIEKSGNESKKYATSSNSLRNRTHGFQHTSSRYSRERSC 242

Query: 392 YEQTQRDLRNKQTELQRVSHELDKTREQKDALARENK 428
                R+ R K    +++ +E +K  E++ +  R ++
Sbjct: 243 SRDRNREYRKKDRRYEKLHNEKEKLLEERTSRKRYSR 279


>AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex
           determiner protein.
          Length = 410

 Score = 27.9 bits (59), Expect = 0.21
 Identities = 17/97 (17%), Positives = 43/97 (44%), Gaps = 3/97 (3%)

Query: 335 KINNVEKQKSRLQSEVEVLIIDLEKANGTARELQKRTEQLERVN---IEIKSRLEETVQL 391
           +I NV  + ++++    VL++++EK+   +++    +  L           SR       
Sbjct: 178 EIKNVLTKINKIKEHDTVLVVNIEKSGNESKKYATSSNSLRNRTHGFQHTSSRYSRERSC 237

Query: 392 YEQTQRDLRNKQTELQRVSHELDKTREQKDALARENK 428
                R+ R K    +++ +E +K  E++ +  R ++
Sbjct: 238 SRDRNREYREKDRRYEKLHNEKEKLLEERTSRKRYSR 274


>AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex
           determiner protein.
          Length = 428

 Score = 27.5 bits (58), Expect = 0.28
 Identities = 16/94 (17%), Positives = 43/94 (45%), Gaps = 3/94 (3%)

Query: 335 KINNVEKQKSRLQSEVEVLIIDLEKANGTARELQKRTEQLERVNIEIK---SRLEETVQL 391
           +I NV  + ++++    VL++++EK+   +++    +  L     + +   SR       
Sbjct: 178 EIKNVLTKINKIKEHDTVLVVNIEKSGNESKKYATSSNSLRSRTHDFQHTSSRYSRERSC 237

Query: 392 YEQTQRDLRNKQTELQRVSHELDKTREQKDALAR 425
                R+ + K    +++ +E +K  E++ +  R
Sbjct: 238 SRDRNREYKEKDRRYEKLHNEKEKLLEERTSRKR 271


>AY352276-1|AAQ67417.1|  385|Apis mellifera complementary sex
           determiner protein.
          Length = 385

 Score = 26.6 bits (56), Expect = 0.49
 Identities = 16/92 (17%), Positives = 40/92 (43%), Gaps = 4/92 (4%)

Query: 335 KINNVEKQKSRLQSEVEVLIIDLEKANGTARELQKRTEQLERVNIEIKSRLEETVQLYEQ 394
           +I NV  + ++++    VL++++EK+   +++    +  L           + T   Y +
Sbjct: 178 EIKNVLTKINKIEEHDTVLVVNIEKSGNESKKYATSSNSLRNRT----HGFQHTSSRYSR 233

Query: 395 TQRDLRNKQTELQRVSHELDKTREQKDALARE 426
            +   R++  E ++     +K   +K  L  E
Sbjct: 234 ERSCSRDRNREYKKKDRRYEKLHNEKKKLLEE 265


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 23.0 bits (47), Expect = 6.0
 Identities = 8/20 (40%), Positives = 16/20 (80%)

Query: 372 EQLERVNIEIKSRLEETVQL 391
           + L+R NI++ +R E+T+Q+
Sbjct: 332 QSLDRQNIDVVARNEDTLQM 351


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 22.6 bits (46), Expect = 8.0
 Identities = 10/32 (31%), Positives = 17/32 (53%)

Query: 73  ERLEEAEGGAESQFEINRKRDTELLKLRKLLE 104
           E ++ A GG+   F+  R R+     LR+ +E
Sbjct: 417 EGIKLAHGGSSKDFKTTRTREQVTEALRRFVE 448


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 22.6 bits (46), Expect = 8.0
 Identities = 10/32 (31%), Positives = 17/32 (53%)

Query: 73  ERLEEAEGGAESQFEINRKRDTELLKLRKLLE 104
           E ++ A GG+   F+  R R+     LR+ +E
Sbjct: 332 EGIKLAHGGSSKDFKTTRTREQVTEALRRFVE 363


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 22.6 bits (46), Expect = 8.0
 Identities = 10/32 (31%), Positives = 17/32 (53%)

Query: 73  ERLEEAEGGAESQFEINRKRDTELLKLRKLLE 104
           E ++ A GG+   F+  R R+     LR+ +E
Sbjct: 651 EGIKLAHGGSSKDFKTTRTREQVTEALRRFVE 682


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.309    0.126    0.318 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,363
Number of Sequences: 429
Number of extensions: 3676
Number of successful extensions: 24
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 15
Number of HSP's gapped (non-prelim): 21
length of query: 512
length of database: 140,377
effective HSP length: 61
effective length of query: 451
effective length of database: 114,208
effective search space: 51507808
effective search space used: 51507808
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 46 (22.6 bits)