GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000611-TA|BGIBMGA000611-PA|undefined
         (62 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    19   3.9  
AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine 3-mon...    19   5.1  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    19   5.1  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    19   5.1  
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    18   8.9  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      18   8.9  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      18   8.9  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    18   8.9  

>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 19.0 bits (37), Expect = 3.9
 Identities = 5/21 (23%), Positives = 13/21 (61%)

Query: 17  VRLALQRSLYDWQMAMTIPLS 37
           +R A  +   +W++ M +P++
Sbjct: 169 LRRAFDKEGKNWEITMAVPIA 189


>AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 290

 Score = 18.6 bits (36), Expect = 5.1
 Identities = 10/41 (24%), Positives = 16/41 (39%)

Query: 5   PNTFGTADTSRHVRLALQRSLYDWQMAMTIPLSAVASLRVA 45
           PN        + + +AL      W + + +P     SLR A
Sbjct: 209 PNHLHIWPRGQFMMIALPNKDNSWTVTLFMPFGKFESLRNA 249


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 18.6 bits (36), Expect = 5.1
 Identities = 10/41 (24%), Positives = 16/41 (39%)

Query: 5   PNTFGTADTSRHVRLALQRSLYDWQMAMTIPLSAVASLRVA 45
           PN        + + +AL      W + + +P     SLR A
Sbjct: 209 PNHLHIWPRGQFMMIALPNKDNSWTVTLFMPFGKFESLRNA 249


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 18.6 bits (36), Expect = 5.1
 Identities = 10/41 (24%), Positives = 16/41 (39%)

Query: 5   PNTFGTADTSRHVRLALQRSLYDWQMAMTIPLSAVASLRVA 45
           PN        + + +AL      W + + +P     SLR A
Sbjct: 209 PNHLHIWPRGQFMMIALPNKDNSWTVTLFMPFGKFESLRNA 249


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 17.8 bits (34), Expect = 8.9
 Identities = 5/15 (33%), Positives = 10/15 (66%)

Query: 47  AQPRRCAKIIHIDVP 61
           ++PRRC     +++P
Sbjct: 97  SRPRRCELAAQLNLP 111


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 17.8 bits (34), Expect = 8.9
 Identities = 8/20 (40%), Positives = 12/20 (60%)

Query: 30  MAMTIPLSAVASLRVACAQP 49
           M +  P ++VAS  V+ A P
Sbjct: 699 MVLPSPSTSVASPSVSVASP 718


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 17.8 bits (34), Expect = 8.9
 Identities = 8/20 (40%), Positives = 12/20 (60%)

Query: 30  MAMTIPLSAVASLRVACAQP 49
           M +  P ++VAS  V+ A P
Sbjct: 591 MVLPSPSTSVASPSVSVASP 610


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 17.8 bits (34), Expect = 8.9
 Identities = 7/20 (35%), Positives = 11/20 (55%)

Query: 15  RHVRLALQRSLYDWQMAMTI 34
           R +R  L+R  + W  A+ I
Sbjct: 309 RRMRNDLERLYFYWSFALLI 328


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.327    0.133    0.418 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,868
Number of Sequences: 317
Number of extensions: 297
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of query: 62
length of database: 114,650
effective HSP length: 42
effective length of query: 20
effective length of database: 101,336
effective search space:  2026720
effective search space used:  2026720
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.9 bits)
S2: 34 (17.8 bits)