GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000611-TA|BGIBMGA000611-PA|undefined
         (62 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF117200-1|ABL67437.1|  421|Anopheles gambiae serpin 1 protein.        20   9.8  
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    20   9.8  

>EF117200-1|ABL67437.1|  421|Anopheles gambiae serpin 1 protein.
          Length = 421

 Score = 19.8 bits (39), Expect = 9.8
 Identities = 7/20 (35%), Positives = 11/20 (55%)

Query: 15 RHVRLALQRSLYDWQMAMTI 34
          RH    + RS +DW +A  +
Sbjct: 33 RHQSSFVSRSDFDWNLAREV 52


>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1099

 Score = 19.8 bits (39), Expect = 9.8
 Identities = 8/10 (80%), Positives = 8/10 (80%)

Query: 11  ADTSRHVRLA 20
           ADTSRH R A
Sbjct: 885 ADTSRHTRWA 894


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.327    0.133    0.418 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,988
Number of Sequences: 2123
Number of extensions: 1521
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of query: 62
length of database: 516,269
effective HSP length: 41
effective length of query: 21
effective length of database: 429,226
effective search space:  9013746
effective search space used:  9013746
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (21.3 bits)
S2: 39 (19.8 bits)