GeneModel BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000611-TA|BGIBMGA000611-PA|undefined
         (62 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC036659-1|AAH36659.1| 1170|Homo sapiens WD repeat domain 35 pro...    28   5.3  
AC079145-3|AAX88936.1| 1170|Homo sapiens unknown protein.              28   5.3  
AB037757-1|BAA92574.2| 1219|Homo sapiens KIAA1336 protein protein.     28   5.3  

>BC036659-1|AAH36659.1| 1170|Homo sapiens WD repeat domain 35
           protein.
          Length = 1170

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 14/52 (26%), Positives = 25/52 (48%)

Query: 11  ADTSRHVRLALQRSLYDWQMAMTIPLSAVASLRVACAQPRRCAKIIHIDVPP 62
           A T  HV  A + + Y WQ  +   L+A+   ++  ++     +I H+D  P
Sbjct: 424 AMTKTHVIAASKEAFYTWQYRVAKKLTALEINQITRSRKEGRERIYHVDDTP 475


>AC079145-3|AAX88936.1| 1170|Homo sapiens unknown protein.
          Length = 1170

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 14/52 (26%), Positives = 25/52 (48%)

Query: 11  ADTSRHVRLALQRSLYDWQMAMTIPLSAVASLRVACAQPRRCAKIIHIDVPP 62
           A T  HV  A + + Y WQ  +   L+A+   ++  ++     +I H+D  P
Sbjct: 424 AMTKTHVIAASKEAFYTWQYRVAKKLTALEINQITRSRKEGRERIYHVDDTP 475


>AB037757-1|BAA92574.2| 1219|Homo sapiens KIAA1336 protein protein.
          Length = 1219

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 14/52 (26%), Positives = 25/52 (48%)

Query: 11  ADTSRHVRLALQRSLYDWQMAMTIPLSAVASLRVACAQPRRCAKIIHIDVPP 62
           A T  HV  A + + Y WQ  +   L+A+   ++  ++     +I H+D  P
Sbjct: 473 AMTKTHVIAASKEAFYTWQYRVAKKLTALEINQITRSRKEGRERIYHVDDTP 524


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.327    0.133    0.418 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,731,790
Number of Sequences: 224733
Number of extensions: 265943
Number of successful extensions: 417
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 414
Number of HSP's gapped (non-prelim): 3
length of query: 62
length of database: 73,234,838
effective HSP length: 42
effective length of query: 20
effective length of database: 63,796,052
effective search space: 1275921040
effective search space used: 1275921040
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.8 bits)
S2: 57 (27.1 bits)