GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000610-TA|BGIBMGA000610-PA|IPR011009|Protein
kinase-like, IPR004119|Protein of unknown function DUF227
         (410 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    25   1.3  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    25   1.3  
DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory pro...    23   3.0  
DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory pro...    23   3.0  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    23   5.2  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   5.2  
DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory pro...    22   6.9  
DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory pro...    22   9.2  

>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 24.6 bits (51), Expect = 1.3
 Identities = 9/12 (75%), Positives = 9/12 (75%)

Query: 289 LFLFMCTNVCSN 300
           LFLF CTN C N
Sbjct: 316 LFLFACTNSCMN 327


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 24.6 bits (51), Expect = 1.3
 Identities = 9/12 (75%), Positives = 9/12 (75%)

Query: 289 LFLFMCTNVCSN 300
           LFLF CTN C N
Sbjct: 316 LFLFACTNSCMN 327


>DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory
           protein 16 protein.
          Length = 126

 Score = 23.4 bits (48), Expect = 3.0
 Identities = 9/17 (52%), Positives = 12/17 (70%)

Query: 219 DPSSVYYKKYNELLGQD 235
           DP   Y KKY+ELL ++
Sbjct: 106 DPQGEYKKKYDELLKKE 122


>DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory
           protein 9 protein.
          Length = 126

 Score = 23.4 bits (48), Expect = 3.0
 Identities = 9/17 (52%), Positives = 12/17 (70%)

Query: 219 DPSSVYYKKYNELLGQD 235
           DP   Y KKY+ELL ++
Sbjct: 106 DPQGEYKKKYDELLKKE 122


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 22.6 bits (46), Expect = 5.2
 Identities = 11/36 (30%), Positives = 20/36 (55%)

Query: 211 QAILIEHEDPSSVYYKKYNELLGQDVYGCLIEMTTT 246
           +AI++ + D   +   +  E+L + +YG L E T T
Sbjct: 317 RAIILYNPDVRGIKSVQEVEMLREKIYGVLEEYTRT 352


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 22.6 bits (46), Expect = 5.2
 Identities = 9/23 (39%), Positives = 12/23 (52%)

Query: 23  KLKTDSDEDIENIELTKAAPNGE 45
           K   DSD D+ N+      P+GE
Sbjct: 214 KSDADSDSDVVNLSKPGTPPSGE 236


>DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory
           protein 14 protein.
          Length = 126

 Score = 22.2 bits (45), Expect = 6.9
 Identities = 8/17 (47%), Positives = 12/17 (70%)

Query: 219 DPSSVYYKKYNELLGQD 235
           DP   Y +KYN+LL ++
Sbjct: 106 DPKGEYKQKYNKLLEKE 122


>DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory
           protein 19 protein.
          Length = 119

 Score = 21.8 bits (44), Expect = 9.2
 Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 6/60 (10%)

Query: 177 DEFKRIA-DLIPE--AYYTEKNRDWYSKFQHKAVMIDQAI---LIEHEDPSSVYYKKYNE 230
           DE KR+  D +    A  +EK ++   K  H      Q +   L    DP  +Y++KY +
Sbjct: 56  DELKRVLPDALKSDCAKCSEKQKEMTKKVIHFLSHNKQQMWKELTAKYDPDGIYFEKYKD 115


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.322    0.138    0.410 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,093
Number of Sequences: 317
Number of extensions: 4229
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 3
Number of HSP's gapped (non-prelim): 8
length of query: 410
length of database: 114,650
effective HSP length: 58
effective length of query: 352
effective length of database: 96,264
effective search space: 33884928
effective search space used: 33884928
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 44 (21.8 bits)