Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000610-TA|BGIBMGA000610-PA|IPR011009|Protein
kinase-like, IPR004119|Protein of unknown function DUF227
(410 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC028972-1|AAH28972.1| 321|Homo sapiens GRAMD1C protein protein. 32 4.2
AY358725-1|AAQ89087.1| 457|Homo sapiens ENLS2543 protein. 32 4.2
BC035040-1|AAH35040.1| 662|Homo sapiens GRAM domain containing ... 31 7.4
U90445-1|AAD00701.1| 405|Homo sapiens p150Glued homolog protein. 31 9.8
BC071583-1|AAH71583.1| 1139|Homo sapiens DCTN1 protein protein. 31 9.8
AF086947-1|AAD03694.1| 1261|Homo sapiens dynactin 1 protein. 31 9.8
AF064205-2|AAD55812.1| 1144|Homo sapiens dynactin 1 p135 isoform... 31 9.8
AF064205-1|AAD55811.1| 1278|Homo sapiens dynactin 1 p150 isoform... 31 9.8
>BC028972-1|AAH28972.1| 321|Homo sapiens GRAMD1C protein protein.
Length = 321
Score = 31.9 bits (69), Expect = 4.2
Identities = 19/85 (22%), Positives = 39/85 (45%), Gaps = 2/85 (2%)
Query: 158 LETLAHLHAVSMTLRIKKPDEFKRIADLIPEAYYTEKNRDWYSKFQHKAVMIDQAILIEH 217
L + H LR+++ +D++ A +KN+D + K V+ D +++E
Sbjct: 238 LSKIEHAAQSFYRLRLQEEKSLNLASDMVSRAETIQKNKDQAHRL--KGVLRDSIVMLEQ 295
Query: 218 EDPSSVYYKKYNELLGQDVYGCLIE 242
S + +K +LL ++ G +E
Sbjct: 296 LKSSLIMLQKTFDLLNKNKTGMAVE 320
>AY358725-1|AAQ89087.1| 457|Homo sapiens ENLS2543 protein.
Length = 457
Score = 31.9 bits (69), Expect = 4.2
Identities = 19/85 (22%), Positives = 39/85 (45%), Gaps = 2/85 (2%)
Query: 158 LETLAHLHAVSMTLRIKKPDEFKRIADLIPEAYYTEKNRDWYSKFQHKAVMIDQAILIEH 217
L + H LR+++ +D++ A +KN+D + K V+ D +++E
Sbjct: 374 LSKIEHAAQSFYRLRLQEEKSLNLASDMVSRAETIQKNKDQAHRL--KGVLRDSIVMLEQ 431
Query: 218 EDPSSVYYKKYNELLGQDVYGCLIE 242
S + +K +LL ++ G +E
Sbjct: 432 LKSSLIMLQKTFDLLNKNKTGMAVE 456
>BC035040-1|AAH35040.1| 662|Homo sapiens GRAM domain containing 1C
protein.
Length = 662
Score = 31.1 bits (67), Expect = 7.4
Identities = 19/85 (22%), Positives = 39/85 (45%), Gaps = 2/85 (2%)
Query: 158 LETLAHLHAVSMTLRIKKPDEFKRIADLIPEAYYTEKNRDWYSKFQHKAVMIDQAILIEH 217
L + H LR+++ +D++ A +KN+D + K V+ D +++E
Sbjct: 579 LSKIEHAAQSFYRLRLQEEKSLNLASDMVSRAETIQKNKDQAHRL--KGVLRDSIVMLEQ 636
Query: 218 EDPSSVYYKKYNELLGQDVYGCLIE 242
S + +K +LL ++ G +E
Sbjct: 637 LKSSLIMPQKTFDLLNKNKTGMAVE 661
>U90445-1|AAD00701.1| 405|Homo sapiens p150Glued homolog protein.
Length = 405
Score = 30.7 bits (66), Expect = 9.8
Identities = 20/83 (24%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Query: 162 AHLHAVSMTLRIKKPDEFKRIADLIPEAYYTEKNRDWYSKFQHKAVMIDQAILIEHEDPS 221
A LH L D +K++ L PE E++ D+ + HK +D+ + +E +
Sbjct: 257 ATLHRYEHALSQCSVDVYKKVGSLYPEMSAHERSLDFLIELLHKD-QLDETVNVEPLTKA 315
Query: 222 SVYYKK-YNELLGQDVYGCLIEM 243
YY+ Y+ L + C +++
Sbjct: 316 IKYYQHLYSIHLAEQPEDCTMQL 338
>BC071583-1|AAH71583.1| 1139|Homo sapiens DCTN1 protein protein.
Length = 1139
Score = 30.7 bits (66), Expect = 9.8
Identities = 20/83 (24%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Query: 162 AHLHAVSMTLRIKKPDEFKRIADLIPEAYYTEKNRDWYSKFQHKAVMIDQAILIEHEDPS 221
A LH L D +K++ L PE E++ D+ + HK +D+ + +E +
Sbjct: 531 ATLHRYEHALSQCSVDVYKKVGSLYPEMSAHERSLDFLIELLHKD-QLDETVNVEPLTKA 589
Query: 222 SVYYKK-YNELLGQDVYGCLIEM 243
YY+ Y+ L + C +++
Sbjct: 590 IKYYQHLYSIHLAEQPEDCTMQL 612
>AF086947-1|AAD03694.1| 1261|Homo sapiens dynactin 1 protein.
Length = 1261
Score = 30.7 bits (66), Expect = 9.8
Identities = 20/83 (24%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Query: 162 AHLHAVSMTLRIKKPDEFKRIADLIPEAYYTEKNRDWYSKFQHKAVMIDQAILIEHEDPS 221
A LH L D +K++ L PE E++ D+ + HK +D+ + +E +
Sbjct: 648 ATLHRYEHALSQCSVDVYKKVGSLYPEMSAHERSLDFLIELLHKD-QLDETVNVEPLTKA 706
Query: 222 SVYYKK-YNELLGQDVYGCLIEM 243
YY+ Y+ L + C +++
Sbjct: 707 IKYYQHLYSIHLAEQPEDCTMQL 729
>AF064205-2|AAD55812.1| 1144|Homo sapiens dynactin 1 p135 isoform
protein.
Length = 1144
Score = 30.7 bits (66), Expect = 9.8
Identities = 20/83 (24%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Query: 162 AHLHAVSMTLRIKKPDEFKRIADLIPEAYYTEKNRDWYSKFQHKAVMIDQAILIEHEDPS 221
A LH L D +K++ L PE E++ D+ + HK +D+ + +E +
Sbjct: 531 ATLHRYEHALSQCSVDVYKKVGSLYPEMSAHERSLDFLIELLHKD-QLDETVNVEPLTKA 589
Query: 222 SVYYKK-YNELLGQDVYGCLIEM 243
YY+ Y+ L + C +++
Sbjct: 590 IKYYQHLYSIHLAEQPEDCTMQL 612
>AF064205-1|AAD55811.1| 1278|Homo sapiens dynactin 1 p150 isoform
protein.
Length = 1278
Score = 30.7 bits (66), Expect = 9.8
Identities = 20/83 (24%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Query: 162 AHLHAVSMTLRIKKPDEFKRIADLIPEAYYTEKNRDWYSKFQHKAVMIDQAILIEHEDPS 221
A LH L D +K++ L PE E++ D+ + HK +D+ + +E +
Sbjct: 665 ATLHRYEHALSQCSVDVYKKVGSLYPEMSAHERSLDFLIELLHKD-QLDETVNVEPLTKA 723
Query: 222 SVYYKK-YNELLGQDVYGCLIEM 243
YY+ Y+ L + C +++
Sbjct: 724 IKYYQHLYSIHLAEQPEDCTMQL 746
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.322 0.138 0.410
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,229,865
Number of Sequences: 224733
Number of extensions: 2445328
Number of successful extensions: 3948
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 3948
Number of HSP's gapped (non-prelim): 12
length of query: 410
length of database: 73,234,838
effective HSP length: 92
effective length of query: 318
effective length of database: 52,559,402
effective search space: 16713889836
effective search space used: 16713889836
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 66 (30.7 bits)
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