Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000609-TA|BGIBMGA000609-PA|undefined
(97 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_10638| Best HMM Match : Myosin_N (HMM E-Value=1.5e-06) 29 0.44
SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.58
SB_10615| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 1.3
SB_39227| Best HMM Match : DRMBL (HMM E-Value=0.76) 27 2.4
SB_30838| Best HMM Match : ResIII (HMM E-Value=0.13) 27 2.4
SB_36698| Best HMM Match : Heme_oxygenase (HMM E-Value=2.5) 27 3.1
SB_14112| Best HMM Match : Amino_oxidase (HMM E-Value=3.3e-13) 27 3.1
SB_49238| Best HMM Match : Metallothionein (HMM E-Value=2.8) 26 4.1
SB_16224| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 4.1
SB_38989| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 5.4
SB_53565| Best HMM Match : Amino_oxidase (HMM E-Value=9.7e-19) 26 5.4
SB_32707| Best HMM Match : Peptidase_A17 (HMM E-Value=4.8e-22) 26 5.4
SB_59003| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 7.2
SB_9496| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 7.2
SB_8828| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 7.2
SB_49747| Best HMM Match : RVT_1 (HMM E-Value=2.1e-36) 25 7.2
SB_51378| Best HMM Match : PAN (HMM E-Value=0.00096) 25 9.5
SB_4966| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.5
SB_437| Best HMM Match : Peptidase_A17 (HMM E-Value=0.00012) 25 9.5
SB_58463| Best HMM Match : DUF1168 (HMM E-Value=0.44) 25 9.5
SB_24486| Best HMM Match : SNF2_N (HMM E-Value=0) 25 9.5
>SB_10638| Best HMM Match : Myosin_N (HMM E-Value=1.5e-06)
Length = 1977
Score = 29.5 bits (63), Expect = 0.44
Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
Query: 14 SGKAQAPQQGTSSDHAATSLAKLPQTRAPGTNFHRV---LARPVSGGLRCAG-APTDL 67
SGKA+ P Q SD A LA+ P++R GT + A P G+ +G APT+L
Sbjct: 858 SGKAKPPDQPAKSDGALGQLAEDPRSRV-GTQQMAINVGHADPAFEGVALSGLAPTNL 914
>SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 790
Score = 29.1 bits (62), Expect = 0.58
Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 2 VVAVFGGVHRPESGKAQAPQQGTSSDHAATSLAKLPQTRAPGTNFHRV 49
VVAVFGG ++ E KA Q+G + AT + +A TN HRV
Sbjct: 621 VVAVFGGGNKYEQSKAL--QEG-AEIVVATPGRLIDHVKAKATNLHRV 665
>SB_10615| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1884
Score = 27.9 bits (59), Expect = 1.3
Identities = 16/44 (36%), Positives = 21/44 (47%)
Query: 21 QQGTSSDHAATSLAKLPQTRAPGTNFHRVLARPVSGGLRCAGAP 64
Q G D A T +A L ++ A FH L+ PV+G G P
Sbjct: 215 QIGCGIDLAGTRVASLLKSSAETGAFHEALSAPVTGWHVATGFP 258
>SB_39227| Best HMM Match : DRMBL (HMM E-Value=0.76)
Length = 600
Score = 27.1 bits (57), Expect = 2.4
Identities = 19/43 (44%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Query: 27 DHAATSLAKLPQTRAPGTNFHRVLARPVSGGL--RCAGAPTDL 67
DH A L + R+PG + VLA P S GL +GA TDL
Sbjct: 541 DHLA-GLVSAGEVRSPGCSPEDVLAVPASPGLVPPSSGALTDL 582
>SB_30838| Best HMM Match : ResIII (HMM E-Value=0.13)
Length = 327
Score = 27.1 bits (57), Expect = 2.4
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 7 GGVHRPESGKAQAPQQGTSSDHAATSLA 34
G +R +A A +GTS+DHA+ +LA
Sbjct: 292 GHHNRMSDSRASAAIEGTSADHASVALA 319
>SB_36698| Best HMM Match : Heme_oxygenase (HMM E-Value=2.5)
Length = 240
Score = 26.6 bits (56), Expect = 3.1
Identities = 15/32 (46%), Positives = 19/32 (59%)
Query: 48 RVLARPVSGGLRCAGAPTDLTLFRLVTAMIDT 79
R LA+P+SG L AG T +T V A I+T
Sbjct: 184 RELAKPISGRLFFAGEATHVTNPATVQAAIET 215
>SB_14112| Best HMM Match : Amino_oxidase (HMM E-Value=3.3e-13)
Length = 482
Score = 26.6 bits (56), Expect = 3.1
Identities = 15/32 (46%), Positives = 19/32 (59%)
Query: 48 RVLARPVSGGLRCAGAPTDLTLFRLVTAMIDT 79
R LA+P+SG L AG T +T V A I+T
Sbjct: 426 RELAKPISGRLFFAGEATHVTNPATVQAAIET 457
>SB_49238| Best HMM Match : Metallothionein (HMM E-Value=2.8)
Length = 293
Score = 26.2 bits (55), Expect = 4.1
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Query: 37 PQTRAPGTNFHRVLARPVSGGLRCAGAPTDLTLFRLVTAMIDT 79
P A G H LA PVSG L AG T++ + V + I+T
Sbjct: 229 PTALAHGLRHH--LASPVSGRLFFAGEATNVKVSATVPSAIET 269
>SB_16224| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1127
Score = 26.2 bits (55), Expect = 4.1
Identities = 12/24 (50%), Positives = 13/24 (54%)
Query: 31 TSLAKLPQTRAPGTNFHRVLARPV 54
T AK T+APG HRV R V
Sbjct: 427 TRNAKAKATKAPGNEIHRVFLRSV 450
>SB_38989| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 104
Score = 25.8 bits (54), Expect = 5.4
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Query: 37 PQTRAPGTNFHRVLARPVSGGLRCAGAPTDLTLFRLVTAMIDT 79
P RA G H LA VSG L AG T++ + V + I+T
Sbjct: 40 PTARAHGLRHH--LASSVSGRLFFAGEATNVKVSATVPSAIET 80
>SB_53565| Best HMM Match : Amino_oxidase (HMM E-Value=9.7e-19)
Length = 438
Score = 25.8 bits (54), Expect = 5.4
Identities = 15/30 (50%), Positives = 18/30 (60%)
Query: 50 LARPVSGGLRCAGAPTDLTLFRLVTAMIDT 79
LA+PVSG L AG T +T V A I+T
Sbjct: 380 LAKPVSGRLFFAGEATHVTNPATVQAAIET 409
>SB_32707| Best HMM Match : Peptidase_A17 (HMM E-Value=4.8e-22)
Length = 2269
Score = 25.8 bits (54), Expect = 5.4
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Query: 37 PQTRAPGTNFHRVLARPVSGGLRCAGAPTDLTLFRLVTAMIDT 79
P RA G H LA VSG L AG T++ + V + I+T
Sbjct: 2205 PTARAHGLRHH--LASSVSGRLFFAGEATNVKVSATVPSAIET 2245
>SB_59003| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 605
Score = 25.4 bits (53), Expect = 7.2
Identities = 11/38 (28%), Positives = 19/38 (50%)
Query: 8 GVHRPESGKAQAPQQGTSSDHAATSLAKLPQTRAPGTN 45
G P++ ++ +P QGT + + + APGTN
Sbjct: 356 GSPAPKTSRSGSPAQGTPKRGSISKIVLKGSNSAPGTN 393
>SB_9496| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2309
Score = 25.4 bits (53), Expect = 7.2
Identities = 12/23 (52%), Positives = 18/23 (78%), Gaps = 1/23 (4%)
Query: 21 QQGTSSDHA-ATSLAKLPQTRAP 42
Q +S+DH+ A +L++LPQ RAP
Sbjct: 734 QYRSSNDHSTADALSRLPQHRAP 756
>SB_8828| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 75
Score = 25.4 bits (53), Expect = 7.2
Identities = 12/23 (52%), Positives = 18/23 (78%), Gaps = 1/23 (4%)
Query: 21 QQGTSSDHA-ATSLAKLPQTRAP 42
Q +S+DH+ A +L++LPQ RAP
Sbjct: 18 QYRSSNDHSTADALSRLPQHRAP 40
>SB_49747| Best HMM Match : RVT_1 (HMM E-Value=2.1e-36)
Length = 877
Score = 25.4 bits (53), Expect = 7.2
Identities = 12/23 (52%), Positives = 18/23 (78%), Gaps = 1/23 (4%)
Query: 21 QQGTSSDHA-ATSLAKLPQTRAP 42
Q +S+DH+ A +L++LPQ RAP
Sbjct: 517 QYRSSNDHSTADALSRLPQHRAP 539
>SB_51378| Best HMM Match : PAN (HMM E-Value=0.00096)
Length = 279
Score = 25.0 bits (52), Expect = 9.5
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 76 MIDTLGGKFGFLVHILEWIS 95
+ID L +FGF +L+W S
Sbjct: 233 LIDRLSSRFGFSGTVLQWFS 252
>SB_4966| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1044
Score = 25.0 bits (52), Expect = 9.5
Identities = 17/60 (28%), Positives = 23/60 (38%)
Query: 15 GKAQAPQQGTSSDHAATSLAKLPQTRAPGTNFHRVLARPVSGGLRCAGAPTDLTLFRLVT 74
G A GT++ T+ A T AP A P G +G T + + LVT
Sbjct: 807 GGTTAAPGGTTAAPGGTTTAPEGTTAAPAATTESPTASPSGNGTSSSGGFTGDSCYSLVT 866
>SB_437| Best HMM Match : Peptidase_A17 (HMM E-Value=0.00012)
Length = 592
Score = 25.0 bits (52), Expect = 9.5
Identities = 13/25 (52%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
Query: 36 LPQTR-APGTNFHRVLARPVSGGLR 59
L +TR APG NFH R SG R
Sbjct: 212 LGKTRLAPGENFHHSTTRATSGSRR 236
>SB_58463| Best HMM Match : DUF1168 (HMM E-Value=0.44)
Length = 603
Score = 25.0 bits (52), Expect = 9.5
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 17 AQAPQQGTSSDHAATSLAKL 36
A APQQG S DH +++ +
Sbjct: 461 AHAPQQGFSQDHGISTITSM 480
>SB_24486| Best HMM Match : SNF2_N (HMM E-Value=0)
Length = 785
Score = 25.0 bits (52), Expect = 9.5
Identities = 10/35 (28%), Positives = 16/35 (45%)
Query: 46 FHRVLARPVSGGLRCAGAPTDLTLFRLVTAMIDTL 80
F + RP+ G C P D+ L R ++ +L
Sbjct: 522 FSNMFERPIMNGQCCDSTPADMKLMRFRAHVLHSL 556
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.322 0.136 0.412
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,259,080
Number of Sequences: 59808
Number of extensions: 117562
Number of successful extensions: 231
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 219
Number of HSP's gapped (non-prelim): 21
length of query: 97
length of database: 16,821,457
effective HSP length: 71
effective length of query: 26
effective length of database: 12,575,089
effective search space: 326952314
effective search space used: 326952314
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 52 (25.0 bits)
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