GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000609-TA|BGIBMGA000609-PA|undefined
         (97 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ441131-4|CAD29633.1|  566|Anopheles gambiae putative apyrase/n...    24   1.1  
AJ439398-3|CAD28126.1|  566|Anopheles gambiae putative 5' nucleo...    24   1.1  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    23   1.5  
CR954257-13|CAJ14164.1|  420|Anopheles gambiae predicted protein...    21   6.0  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    21   6.0  
AY428512-1|AAR89530.1|  420|Anopheles gambiae EKN1 protein.            21   6.0  

>AJ441131-4|CAD29633.1|  566|Anopheles gambiae putative
           apyrase/nucleotidase protein.
          Length = 566

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 5/43 (11%)

Query: 56  GGLRCAGAPTDLTLFRLVTAM-----IDTLGGKFGFLVHILEW 93
           GGLR + AP  LT   LVTA+     +DT   +  +L+  LE+
Sbjct: 413 GGLRTSLAPGTLTYEDLVTAIPYENTVDTFELRGQYLLDALEY 455


>AJ439398-3|CAD28126.1|  566|Anopheles gambiae putative 5'
           nucleotidase protein.
          Length = 566

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 5/43 (11%)

Query: 56  GGLRCAGAPTDLTLFRLVTAM-----IDTLGGKFGFLVHILEW 93
           GGLR + AP  LT   LVTA+     +DT   +  +L+  LE+
Sbjct: 413 GGLRTSLAPGTLTYEDLVTAIPYENTVDTFELRGQYLLDALEY 455


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
            topoisomerase protein.
          Length = 1039

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 17/59 (28%), Positives = 22/59 (37%), Gaps = 7/59 (11%)

Query: 23   GTSSDHAATSLAKLPQTRAPGTNFHRVLARPVSGGLRCAGAPTDLTLFRLVTAMIDTLG 81
            G  S H+ T+ +K  +T +PG    R       GG   AG P   T       M    G
Sbjct: 974  GKKSSHSGTNSSKRKKTVSPGEKKDR-------GGPMAAGGPPSATAISYGLTMAGAAG 1025


>CR954257-13|CAJ14164.1|  420|Anopheles gambiae predicted protein
           protein.
          Length = 420

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 8/16 (50%), Positives = 10/16 (62%)

Query: 10  HRPESGKAQAPQQGTS 25
           +RP+  KA AP  G S
Sbjct: 178 YRPDPAKASAPNAGKS 193


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskeletal
            structural protein protein.
          Length = 1645

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 7/15 (46%), Positives = 12/15 (80%)

Query: 11   RPESGKAQAPQQGTS 25
            +P+SG  QAP++ T+
Sbjct: 1453 QPDSGTEQAPREATA 1467


>AY428512-1|AAR89530.1|  420|Anopheles gambiae EKN1 protein.
          Length = 420

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 8/16 (50%), Positives = 10/16 (62%)

Query: 10  HRPESGKAQAPQQGTS 25
           +RP+  KA AP  G S
Sbjct: 178 YRPDPAKASAPSAGKS 193


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.322    0.136    0.412 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,203
Number of Sequences: 2123
Number of extensions: 3235
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of query: 97
length of database: 516,269
effective HSP length: 55
effective length of query: 42
effective length of database: 399,504
effective search space: 16779168
effective search space used: 16779168
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 42 (21.0 bits)