GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000609-TA|BGIBMGA000609-PA|undefined
         (97 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT021245-1|AAX33393.1| 1823|Drosophila melanogaster RE64082p pro...    29   0.68 
AF243382-1|AAF68440.1| 1548|Drosophila melanogaster cytoplasmic ...    29   0.68 
AE014296-703|AAF47799.2| 1818|Drosophila melanogaster CG10847-PB...    29   0.68 
AE014296-702|AAS64963.1| 1823|Drosophila melanogaster CG10847-PA...    29   0.68 
AY122252-1|AAM52764.1| 1038|Drosophila melanogaster SD05989p pro...    28   1.6  
AE014297-1611|AAN14338.1| 2347|Drosophila melanogaster CG7518-PB...    28   1.6  
AE014297-1610|AAF54888.2| 2451|Drosophila melanogaster CG7518-PA...    28   1.6  
AL035245-2|CAA22836.1| 1464|Drosophila melanogaster EG:133E12.2 ...    26   8.4  

>BT021245-1|AAX33393.1| 1823|Drosophila melanogaster RE64082p protein.
          Length = 1823

 Score = 29.5 bits (63), Expect = 0.68
 Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 3/46 (6%)

Query: 3    VAVFGGVHRPESGKAQ---APQQGTSSDHAATSLAKLPQTRAPGTN 45
            VA  GG H P +G AQ   AP   T++ HA  +L       A GT+
Sbjct: 1260 VAHAGGAHHPSAGSAQIIAAPAASTTTYHALPTLTLAHGGPATGTD 1305


>AF243382-1|AAF68440.1| 1548|Drosophila melanogaster cytoplasmic
            protein encore protein.
          Length = 1548

 Score = 29.5 bits (63), Expect = 0.68
 Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 3/46 (6%)

Query: 3    VAVFGGVHRPESGKAQ---APQQGTSSDHAATSLAKLPQTRAPGTN 45
            VA  GG H P +G AQ   AP   T++ HA  +L       A GT+
Sbjct: 1111 VAHAGGAHHPSAGSAQIIAAPAASTTTYHALPTLTLAHGGPATGTD 1156


>AE014296-703|AAF47799.2| 1818|Drosophila melanogaster CG10847-PB,
            isoform B protein.
          Length = 1818

 Score = 29.5 bits (63), Expect = 0.68
 Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 3/46 (6%)

Query: 3    VAVFGGVHRPESGKAQ---APQQGTSSDHAATSLAKLPQTRAPGTN 45
            VA  GG H P +G AQ   AP   T++ HA  +L       A GT+
Sbjct: 1255 VAHAGGAHHPSAGSAQIIAAPAASTTTYHALPTLTLAHGGPATGTD 1300


>AE014296-702|AAS64963.1| 1823|Drosophila melanogaster CG10847-PA,
            isoform A protein.
          Length = 1823

 Score = 29.5 bits (63), Expect = 0.68
 Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 3/46 (6%)

Query: 3    VAVFGGVHRPESGKAQ---APQQGTSSDHAATSLAKLPQTRAPGTN 45
            VA  GG H P +G AQ   AP   T++ HA  +L       A GT+
Sbjct: 1260 VAHAGGAHHPSAGSAQIIAAPAASTTTYHALPTLTLAHGGPATGTD 1305


>AY122252-1|AAM52764.1| 1038|Drosophila melanogaster SD05989p
           protein.
          Length = 1038

 Score = 28.3 bits (60), Expect = 1.6
 Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 1/49 (2%)

Query: 8   GVHRPESGKAQAPQQGTSSDHAATSLAKLPQTRAPGTNFHRVLARPVSG 56
           G  +P  G  Q P Q  S+ HAA S+A  P+    G   HR     +SG
Sbjct: 401 GRTKPTPGGQQQPVQQHSNAHAAESIAP-PKKSQRGKRGHRQKQEDLSG 448


>AE014297-1611|AAN14338.1| 2347|Drosophila melanogaster CG7518-PB,
            isoform B protein.
          Length = 2347

 Score = 28.3 bits (60), Expect = 1.6
 Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 1/49 (2%)

Query: 8    GVHRPESGKAQAPQQGTSSDHAATSLAKLPQTRAPGTNFHRVLARPVSG 56
            G  +P  G  Q P Q  S+ HAA S+A  P+    G   HR     +SG
Sbjct: 1663 GRTKPTPGGQQQPVQQHSNAHAAESIAP-PKKSQRGKRGHRQKQEDLSG 1710


>AE014297-1610|AAF54888.2| 2451|Drosophila melanogaster CG7518-PA,
            isoform A protein.
          Length = 2451

 Score = 28.3 bits (60), Expect = 1.6
 Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 1/49 (2%)

Query: 8    GVHRPESGKAQAPQQGTSSDHAATSLAKLPQTRAPGTNFHRVLARPVSG 56
            G  +P  G  Q P Q  S+ HAA S+A  P+    G   HR     +SG
Sbjct: 1663 GRTKPTPGGQQQPVQQHSNAHAAESIAP-PKKSQRGKRGHRQKQEDLSG 1710


>AL035245-2|CAA22836.1| 1464|Drosophila melanogaster EG:133E12.2
           protein.
          Length = 1464

 Score = 25.8 bits (54), Expect = 8.4
 Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 4/61 (6%)

Query: 9   VHRPESG-KAQAPQQGTSSDHAATSLAKLPQTRAPGTNFHRVLARPVSGGLRCAGAPTDL 67
           +H   S   A  PQ+G SS  +  SL + P T    T   R    P +G L  A A T +
Sbjct: 206 IHSSSSAVSAAGPQRGGSSRASPDSLEEKPSTT---TTTGRPTLTPTNGVLSSASAGTGI 262

Query: 68  T 68
           +
Sbjct: 263 S 263


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.322    0.136    0.412 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,914,332
Number of Sequences: 52641
Number of extensions: 186003
Number of successful extensions: 496
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 496
Number of HSP's gapped (non-prelim): 8
length of query: 97
length of database: 24,830,863
effective HSP length: 73
effective length of query: 24
effective length of database: 20,988,070
effective search space: 503713680
effective search space used: 503713680
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 54 (25.8 bits)