Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000608-TA|BGIBMGA000608-PA|IPR001623|Heat shock protein
DnaJ, N-terminal
(358 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_6887| Best HMM Match : No HMM Matches (HMM E-Value=.) 265 3e-71
SB_21898| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 3e-07
SB_34242| Best HMM Match : DnaJ (HMM E-Value=9.2e-30) 52 5e-07
SB_11933| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 5e-07
SB_39063| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 5e-06
SB_49296| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 2e-05
SB_41006| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 2e-05
SB_21411| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 4e-05
SB_31961| Best HMM Match : EGF (HMM E-Value=0) 46 5e-05
SB_2302| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 6e-05
SB_293| Best HMM Match : DnaJ (HMM E-Value=7.6e-37) 46 6e-05
SB_13439| Best HMM Match : DnaJ (HMM E-Value=5.9e-24) 46 6e-05
SB_20922| Best HMM Match : RVT_1 (HMM E-Value=0) 45 8e-05
SB_3383| Best HMM Match : DnaJ (HMM E-Value=3.8e-40) 45 8e-05
SB_59454| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 3e-04
SB_42340| Best HMM Match : DnaJ (HMM E-Value=3.2e-32) 44 3e-04
SB_16477| Best HMM Match : DnaJ (HMM E-Value=8.1e-33) 44 3e-04
SB_2842| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 3e-04
SB_31923| Best HMM Match : DnaJ (HMM E-Value=2.8e-38) 43 4e-04
SB_43852| Best HMM Match : DnaJ (HMM E-Value=1.7e-37) 42 8e-04
SB_21966| Best HMM Match : DnaJ (HMM E-Value=5.30001e-40) 41 0.001
SB_16586| Best HMM Match : DnaJ (HMM E-Value=4.9e-10) 41 0.001
SB_2261| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.002
SB_34890| Best HMM Match : DnaJ (HMM E-Value=2.7e-37) 39 0.005
SB_16146| Best HMM Match : DnaJ (HMM E-Value=2.7e-37) 39 0.005
SB_37512| Best HMM Match : DnaJ (HMM E-Value=1.3e-29) 39 0.005
SB_58160| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.051
SB_45438| Best HMM Match : DnaJ (HMM E-Value=4.4e-26) 36 0.051
SB_56859| Best HMM Match : rve (HMM E-Value=4.8e-35) 35 0.088
SB_47290| Best HMM Match : Ank (HMM E-Value=5.4e-29) 35 0.088
SB_17567| Best HMM Match : DnaJ (HMM E-Value=0.0007) 35 0.12
SB_48086| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.15
SB_29448| Best HMM Match : DnaJ (HMM E-Value=0.00022) 34 0.20
SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.82
SB_6206| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.4
SB_3343| Best HMM Match : DnaJ (HMM E-Value=0.067) 29 4.4
>SB_6887| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 875
Score = 265 bits (650), Expect = 3e-71
Identities = 134/339 (39%), Positives = 199/339 (58%), Gaps = 12/339 (3%)
Query: 7 KKSIFLAYIFWLFGGPFGVHHFYLRRDRHAFVWWTTLGG-FGIGWLGEVFRIPRYVRDAN 65
KKS+ L YI W G G+HHFYL RD AFVWW+T GG FG+GWL +++RIP YV DAN
Sbjct: 517 KKSLLLTYIIWFKLGWLGLHHFYLGRDIQAFVWWSTFGGVFGLGWLRDLWRIPEYVEDAN 576
Query: 66 EDPKYVEDLIGRMIRNKKPPFSMNRFTGMLMVGYSWGQMMMVAVP-SDEIWGINFRYLNY 124
ED Y+E+L ++ K+PPFS RF G ++VGY +G + +A+P S W
Sbjct: 577 EDHYYIEELKRKIKLRKEPPFSTTRFAGQMLVGYFYGILTRLAIPESAPKWTPAL----- 631
Query: 125 LIPLVAALGVWTVGNIGHEQGTLKWPLLAAYVSYPLRYFIYDETVFFTIMVLSAALAFDS 184
+PL A G++ VGNIG E+G K+ L+ VSY FI + + L A+ F
Sbjct: 632 WVPLAVASGIYLVGNIGRERGDFKYALIGCLVSYASITFINGDEAGNMYVALFGAMLFQ- 690
Query: 185 FSKQWRRTPRRHR--FVKRVIVLGVCAXXXXXXXXXXXXFNGTITDSEGDEVPIYEALHH 242
+ +++R+ ++ + +RV VL + FN +T +G+ + + +A++H
Sbjct: 691 YKREYRKEIKQEKRSLCRRVQVLALGGLIMCALWGSFIYFNAEVTTEDGETIKLRDAVNH 750
Query: 243 FFTSPWWLDVKQCLIDTYQYAQHHGWYEVWKQIIDLSDPHGEQNAYKVLGLGPEATQQEI 302
FF SP WL+ K L Y Q +GW ++ + DP GE+N+Y+VLGL +ATQ+EI
Sbjct: 751 FFNSPVWLEFKDVLWQLYDEGQKNGWQNLYDDFVKALDPRGEKNSYRVLGLTEDATQEEI 810
Query: 303 TSTWRRLSREHHPDKVKDENGRRAAQERFMEIQQAYEIL 341
+++L+ + HPD+ +D + AQ+ FMEIQ+AYEIL
Sbjct: 811 KKRYKKLAMKWHPDRHRD--NKEEAQKHFMEIQEAYEIL 847
>SB_21898| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1084
Score = 53.2 bits (122), Expect = 3e-07
Identities = 23/54 (42%), Positives = 37/54 (68%), Gaps = 4/54 (7%)
Query: 288 YKVLGLGPEATQQEITSTWRRLSREHHPDKVKDENGRRAAQERFMEIQQAYEIL 341
YK+LG+ P A Q+EI + L++++HPD KD ++A E+F E+ +AYE+L
Sbjct: 61 YKILGVPPNANQKEIKKAYFELAKKYHPDTNKD----KSASEKFQEVSEAYEVL 110
>SB_34242| Best HMM Match : DnaJ (HMM E-Value=9.2e-30)
Length = 238
Score = 52.4 bits (120), Expect = 5e-07
Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 271 VWKQIIDLSDPHGEQNAYKVLGLGPEATQQEITSTWRRLSREHHPDKVKDENGRRAAQER 330
VW + + P ++N Y VLG+ P+A+Q +I + +LS +HHPD+ G E
Sbjct: 58 VWSRCY-ANKPGSKKNYYNVLGVSPKASQSKIKDAYYKLSMKHHPDR---HQGSDKKHEV 113
Query: 331 FMEIQQAYEIL 341
F EI +AY +L
Sbjct: 114 FQEIAEAYSVL 124
>SB_11933| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 238
Score = 52.4 bits (120), Expect = 5e-07
Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 271 VWKQIIDLSDPHGEQNAYKVLGLGPEATQQEITSTWRRLSREHHPDKVKDENGRRAAQER 330
VW + + P ++N Y VLG+ P+A+Q +I + +LS +HHPD+ G E
Sbjct: 58 VWSRCY-ANKPGSKKNYYNVLGVSPKASQSKIKDAYYKLSMKHHPDR---HQGSDKKHEV 113
Query: 331 FMEIQQAYEIL 341
F EI +AY +L
Sbjct: 114 FQEIAEAYSVL 124
>SB_39063| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 350
Score = 49.2 bits (112), Expect = 5e-06
Identities = 22/57 (38%), Positives = 38/57 (66%), Gaps = 4/57 (7%)
Query: 285 QNAYKVLGLGPEATQQEITSTWRRLSREHHPDKVKDENGRRAAQERFMEIQQAYEIL 341
+N Y +LG+ +A+ QE+ +++ + ++HPDK KD A+E+F EI +AYE+L
Sbjct: 3 KNYYDILGVKKDASDQELKKAYKKQAFKYHPDKNKDP----GAEEKFKEIAEAYEVL 55
>SB_49296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 966
Score = 47.2 bits (107), Expect = 2e-05
Identities = 23/54 (42%), Positives = 34/54 (62%), Gaps = 6/54 (11%)
Query: 288 YKVLGLGPEATQQEITSTWRRLSREHHPDKVKDENGRRAAQERFMEIQQAYEIL 341
Y +L + P AT EI ++R+L+ ++HPDK DE +RF +I QAYE+L
Sbjct: 67 YDILNVPPTATATEIKKSYRKLALKYHPDKNPDEG------DRFKQISQAYEVL 114
>SB_41006| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 725
Score = 47.2 bits (107), Expect = 2e-05
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 6/58 (10%)
Query: 284 EQNAYKVLGLGPEATQQEITSTWRRLSREHHPDKVKDENGRRAAQERFMEIQQAYEIL 341
E N Y+VLG+ AT +I +RRL+ ++HPDK +E F E+ +AYE+L
Sbjct: 2 ESNYYEVLGVERNATTDDIRRAYRRLALKYHPDK------NAGTEENFKEVSEAYEVL 53
>SB_21411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 308
Score = 46.4 bits (105), Expect = 4e-05
Identities = 21/58 (36%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Query: 284 EQNAYKVLGLGPEATQQEITSTWRRLSREHHPDKVKDENGRRAAQERFMEIQQAYEIL 341
+++ YK+LGL ++EIT +R+L+ + HPD K E+ ++ A++ F++I A E+L
Sbjct: 206 KRDYYKILGLKRNCNKREITKAYRKLAVKWHPDNYKGED-KKKAEKMFIDIAAAKEVL 262
>SB_31961| Best HMM Match : EGF (HMM E-Value=0)
Length = 2813
Score = 46.0 bits (104), Expect = 5e-05
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 266 HGWYEVWKQIIDLSDPHGEQNAYKVLGLGPEATQQEITSTWRRLSREHHPDKVKDENGRR 325
H W V ++ D+ + + N Y+VLG+ ATQ EI +RR+S + HPD+ K+++
Sbjct: 2464 HAWDSVDLELFDIVE-EVKDNFYQVLGVETTATQAEIRRAYRRISLQLHPDRNKEDD--- 2519
Query: 326 AAQERFMEIQQAYEIL 341
A+ +F ++ E+L
Sbjct: 2520 -AELKFRKLVAVAEVL 2534
>SB_2302| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 445
Score = 45.6 bits (103), Expect = 6e-05
Identities = 26/57 (45%), Positives = 33/57 (57%), Gaps = 4/57 (7%)
Query: 285 QNAYKVLGLGPEATQQEITSTWRRLSREHHPDKVKDENGRRAAQERFMEIQQAYEIL 341
+N Y V+ L P ATQ+EI S + LSR +HPD N A+ERF E+ AY L
Sbjct: 50 KNHYDVMKLLPTATQREIKSAYYELSRIYHPDL----NSSAEARERFAELTLAYNTL 102
>SB_293| Best HMM Match : DnaJ (HMM E-Value=7.6e-37)
Length = 238
Score = 45.6 bits (103), Expect = 6e-05
Identities = 22/54 (40%), Positives = 36/54 (66%), Gaps = 3/54 (5%)
Query: 288 YKVLGLGPEATQQEITSTWRRLSREHHPDKVKDENGRRAAQERFMEIQQAYEIL 341
Y +LG+ +A++ +I +R+L+ + HPDK KD+ AQE+F +I AYE+L
Sbjct: 27 YAILGVPRDASKNQIKRAYRKLAMKLHPDKNKDD---PKAQEKFHDIGAAYEVL 77
>SB_13439| Best HMM Match : DnaJ (HMM E-Value=5.9e-24)
Length = 565
Score = 45.6 bits (103), Expect = 6e-05
Identities = 26/57 (45%), Positives = 33/57 (57%), Gaps = 4/57 (7%)
Query: 285 QNAYKVLGLGPEATQQEITSTWRRLSREHHPDKVKDENGRRAAQERFMEIQQAYEIL 341
+N Y V+ L P ATQ+EI S + LSR +HPD N A+ERF E+ AY L
Sbjct: 197 KNHYDVMKLLPTATQREIKSAYYELSRIYHPDL----NSSAEARERFAELTLAYNTL 249
>SB_20922| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 576
Score = 45.2 bits (102), Expect = 8e-05
Identities = 19/54 (35%), Positives = 38/54 (70%), Gaps = 4/54 (7%)
Query: 288 YKVLGLGPEATQQEITSTWRRLSREHHPDKVKDENGRRAAQERFMEIQQAYEIL 341
Y++LG+ A+ ++I +R+++ ++HPDK K ++ A+E+F E+ +AYE+L
Sbjct: 28 YQILGVPRNASDKQIKKAFRKMAVKYHPDKNKGKD----AEEKFREVAEAYEVL 77
>SB_3383| Best HMM Match : DnaJ (HMM E-Value=3.8e-40)
Length = 250
Score = 45.2 bits (102), Expect = 8e-05
Identities = 19/57 (33%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
Query: 285 QNAYKVLGLGPEATQQEITSTWRRLSREHHPDKVKDENGRRAAQERFMEIQQAYEIL 341
++ Y+VLG+ A+++++ +RR + HPD K+ R A+E+F ++ +AYE+L
Sbjct: 3 EDYYEVLGVPRSASEEDVKKAYRRQALRWHPD--KNPTNREHAEEKFKKLSEAYEVL 57
>SB_59454| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 43.6 bits (98), Expect = 3e-04
Identities = 19/57 (33%), Positives = 36/57 (63%), Gaps = 4/57 (7%)
Query: 288 YKVLGLGPEATQQEITSTWRRLSREHHPDK---VKDENGRRAAQERFMEIQQAYEIL 341
YK+L + A++ EI +++ + +HHPD+ DE ++ A+++F E+ +AY IL
Sbjct: 161 YKILNISKTASEDEIKKAYKKEALKHHPDRHSGASDEQ-KKIAEKQFKEVNEAYSIL 216
>SB_42340| Best HMM Match : DnaJ (HMM E-Value=3.2e-32)
Length = 264
Score = 43.6 bits (98), Expect = 3e-04
Identities = 19/57 (33%), Positives = 36/57 (63%), Gaps = 4/57 (7%)
Query: 288 YKVLGLGPEATQQEITSTWRRLSREHHPDK---VKDENGRRAAQERFMEIQQAYEIL 341
YK+L + A++ EI +++ + +HHPD+ DE ++ A+++F E+ +AY IL
Sbjct: 161 YKILNISKTASEDEIKKAYKKEALKHHPDRHSGASDEQ-KKIAEKQFKEVNEAYSIL 216
>SB_16477| Best HMM Match : DnaJ (HMM E-Value=8.1e-33)
Length = 138
Score = 43.6 bits (98), Expect = 3e-04
Identities = 19/54 (35%), Positives = 35/54 (64%), Gaps = 2/54 (3%)
Query: 288 YKVLGLGPEATQQEITSTWRRLSREHHPDKVKDENGRRAAQERFMEIQQAYEIL 341
Y +L + A++Q+I ++R+L+ + HPD K+ + A+ +F EI +AYE+L
Sbjct: 5 YDILEVPRSASEQDIKKSYRKLALKWHPD--KNPQNKEEAERKFKEISEAYEVL 56
>SB_2842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 257
Score = 43.6 bits (98), Expect = 3e-04
Identities = 20/59 (33%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 283 GEQNAYKVLGLGPEATQQEITSTWRRLSREHHPDKVKDENGRRAAQERFMEIQQAYEIL 341
G +N Y VLG+ A++ EI +R++S + HPD+ D+ + A +F + ++Y IL
Sbjct: 12 GVKNLYDVLGVSKTASESEIKRAYRKISLQVHPDRA-DKGEKEKATRKFQALSKSYCIL 69
>SB_31923| Best HMM Match : DnaJ (HMM E-Value=2.8e-38)
Length = 161
Score = 42.7 bits (96), Expect = 4e-04
Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 4/57 (7%)
Query: 285 QNAYKVLGLGPEATQQEITSTWRRLSREHHPDKVKDENGRRAAQERFMEIQQAYEIL 341
+N Y +LG+ A+ +I +RR + HPDK N A+E+F EI +AY++L
Sbjct: 3 RNYYAILGVPRNASDDDIKKAYRRQALIFHPDK----NKNSGAEEKFKEISEAYKVL 55
>SB_43852| Best HMM Match : DnaJ (HMM E-Value=1.7e-37)
Length = 399
Score = 41.9 bits (94), Expect = 8e-04
Identities = 20/54 (37%), Positives = 33/54 (61%), Gaps = 4/54 (7%)
Query: 288 YKVLGLGPEATQQEITSTWRRLSREHHPDKVKDENGRRAAQERFMEIQQAYEIL 341
Y +LGL AT +I +R+LS ++HPDK N +A+ +F + +AY++L
Sbjct: 6 YDILGLTRSATDADIKKEYRKLSLKYHPDK----NQEPSAEVKFRQAAEAYDVL 55
>SB_21966| Best HMM Match : DnaJ (HMM E-Value=5.30001e-40)
Length = 351
Score = 41.1 bits (92), Expect = 0.001
Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 4/54 (7%)
Query: 288 YKVLGLGPEATQQEITSTWRRLSREHHPDKVKDENGRRAAQERFMEIQQAYEIL 341
Y VL + A+ +I +R+ + ++HPDK N A+E+F EI +AYE+L
Sbjct: 6 YAVLNVDKAASADDIKKAYRKQALKYHPDK----NKSPGAEEKFKEISEAYEVL 55
>SB_16586| Best HMM Match : DnaJ (HMM E-Value=4.9e-10)
Length = 141
Score = 41.1 bits (92), Expect = 0.001
Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 285 QNAYKVLGLGPEATQQEITSTWRRLSREHHPDKVKDE----NGRRAAQERFMEIQQAYEI 340
++A VLG+ P I +R+L EHHPDK+ + A+++ EIQQAYE+
Sbjct: 74 EDACNVLGVKPTDDATTIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKQKAQEIQQAYEL 133
Query: 341 L 341
+
Sbjct: 134 I 134
>SB_2261| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 572
Score = 40.7 bits (91), Expect = 0.002
Identities = 21/54 (38%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Query: 288 YKVLGLGPEATQQEITSTWRRLSREHHPDKVKDENGRRAAQERFMEIQQAYEIL 341
Y+VLG+ + + T+R+L+ + HPDK D N + + F EIQQAY++L
Sbjct: 6 YEVLGVERDVDDSALKKTYRKLALKWHPDKNLD-NAEESTRV-FREIQQAYDVL 57
>SB_34890| Best HMM Match : DnaJ (HMM E-Value=2.7e-37)
Length = 386
Score = 39.1 bits (87), Expect = 0.005
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 6/54 (11%)
Query: 288 YKVLGLGPEATQQEITSTWRRLSREHHPDKVKDENGRRAAQERFMEIQQAYEIL 341
Y +LG+ A+ +I +R+L++E HPDK D E+F +I AYEIL
Sbjct: 7 YDLLGVPQNASDNDIKKAYRKLAKELHPDKNPDTG------EKFKDITFAYEIL 54
>SB_16146| Best HMM Match : DnaJ (HMM E-Value=2.7e-37)
Length = 79
Score = 39.1 bits (87), Expect = 0.005
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 6/54 (11%)
Query: 288 YKVLGLGPEATQQEITSTWRRLSREHHPDKVKDENGRRAAQERFMEIQQAYEIL 341
Y +LG+ A+ +I +R+L++E HPDK D E+F +I AYEIL
Sbjct: 7 YDLLGVPQNASDNDIKKAYRKLAKELHPDKNPDTG------EKFKDITFAYEIL 54
>SB_37512| Best HMM Match : DnaJ (HMM E-Value=1.3e-29)
Length = 291
Score = 39.1 bits (87), Expect = 0.005
Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Query: 283 GEQNAYKVLGLGPEATQQEITSTWRRLSREHHPDKVKDENGRRAAQERFMEIQQAYEIL 341
G +N Y LG+ ++T++EI +R+ + + HPDK D A E F ++ +A E+L
Sbjct: 4 GGENYYDTLGVHKDSTEKEILKAYRKKALKCHPDKNPD---NPKASELFHKLSKALEVL 59
>SB_58160| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 214
Score = 35.9 bits (79), Expect = 0.051
Identities = 18/58 (31%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 284 EQNAYKVLGLGPEATQQEITSTWRRLSREHHPDKVKDENGRRAAQERFMEIQQAYEIL 341
++N Y++L + +A+Q EI S + + ++E HPD D+ A F+++ +AY L
Sbjct: 6 KKNFYEILDVPKDASQTEIKSAFIKKTKEFHPDVNPDDPDSHKA---FIKVSEAYTTL 60
>SB_45438| Best HMM Match : DnaJ (HMM E-Value=4.4e-26)
Length = 211
Score = 35.9 bits (79), Expect = 0.051
Identities = 18/58 (31%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 284 EQNAYKVLGLGPEATQQEITSTWRRLSREHHPDKVKDENGRRAAQERFMEIQQAYEIL 341
++N Y++L + +A+Q EI S + + ++E HPD D+ A F+++ +AY L
Sbjct: 67 KKNFYEILDVPKDASQTEIKSAFIKKTKEFHPDVNPDDPDSHKA---FIKVSEAYTTL 121
>SB_56859| Best HMM Match : rve (HMM E-Value=4.8e-35)
Length = 1671
Score = 35.1 bits (77), Expect = 0.088
Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 6/56 (10%)
Query: 284 EQNAYKVLGLGPEATQQEITSTWRRLSREHHPDKVKDENGRRAAQERFMEIQQAYE 339
E + Y VL + A+ EI +R LS+++HPDK E G +FM I +AYE
Sbjct: 1246 EYDPYAVLEIDRGASVAEIRRQYRSLSKKYHPDK---ETG---DPRKFMRIAKAYE 1295
>SB_47290| Best HMM Match : Ank (HMM E-Value=5.4e-29)
Length = 445
Score = 35.1 bits (77), Expect = 0.088
Identities = 15/57 (26%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Query: 285 QNAYKVLGLGPEATQQEITSTWRRLSREHHPDKVKDENGRRAAQERFMEIQQAYEIL 341
++ Y +L G AT ++I + +++ ++E HPDK +++ + E F +++A ++L
Sbjct: 287 EDFYSLLDCGEYATNEQINTEFKKKAKEWHPDKKRNDTD---SHEYFARLKKARDVL 340
>SB_17567| Best HMM Match : DnaJ (HMM E-Value=0.0007)
Length = 831
Score = 34.7 bits (76), Expect = 0.12
Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
Query: 278 LSDPHGEQNAYKVLGLGPEATQQEITSTWRRLSREHHPDK 317
LS HG+ Y +LG+ PEA+ +I +R+L+ HPDK
Sbjct: 794 LSRRHGDP--YSILGVPPEASDDDIKRQYRKLAVLIHPDK 831
>SB_48086| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1353
Score = 34.3 bits (75), Expect = 0.15
Identities = 16/42 (38%), Positives = 24/42 (57%)
Query: 284 EQNAYKVLGLGPEATQQEITSTWRRLSREHHPDKVKDENGRR 325
E + Y VL + EA + E+ + +RRL +HPDK D +R
Sbjct: 129 EVDYYAVLAVRKEANEDELKAAYRRLCVLYHPDKHTDPEKKR 170
>SB_29448| Best HMM Match : DnaJ (HMM E-Value=0.00022)
Length = 118
Score = 33.9 bits (74), Expect = 0.20
Identities = 20/44 (45%), Positives = 25/44 (56%), Gaps = 4/44 (9%)
Query: 288 YKVLGLGPEATQQEITSTWRRLSREHHPDKVKDENGRRAAQERF 331
Y V+ L P AT +EI S + LSR +HPD N A+ERF
Sbjct: 77 YDVMKLLPTATLREIKSAYYELSRIYHPDL----NSSAEARERF 116
>SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 711
Score = 31.9 bits (69), Expect = 0.82
Identities = 12/35 (34%), Positives = 23/35 (65%)
Query: 285 QNAYKVLGLGPEATQQEITSTWRRLSREHHPDKVK 319
++ Y++ G+ +AT +EI +++L+ HPDK K
Sbjct: 27 EDYYELFGISRDATSKEIRKAFKKLALRLHPDKNK 61
>SB_6206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 397
Score = 31.1 bits (67), Expect = 1.4
Identities = 23/94 (24%), Positives = 40/94 (42%), Gaps = 4/94 (4%)
Query: 251 DVKQCLIDTYQYAQHHG----WYEVWKQIIDLSDPHGEQNAYKVLGLGPEATQQEITSTW 306
DVK+ T +Y QH +Y WK + + H E +V G +++E +
Sbjct: 286 DVKEVEQWTSEYKQHPNAIVKFYSTWKSMKPVISQHHEDEDSEVEFEGDSDSEEEKPKSK 345
Query: 307 RRLSREHHPDKVKDENGRRAAQERFMEIQQAYEI 340
+R S+ + K + A R EI+Q+ +
Sbjct: 346 KRKSKTKERNTEKAQQKASKANARDKEIEQSENV 379
>SB_3343| Best HMM Match : DnaJ (HMM E-Value=0.067)
Length = 29
Score = 29.5 bits (63), Expect = 4.4
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 290 VLGLGPEATQQEITSTWRRLSREHHPDK 317
+LG+ PEA+ +I +R+L+ HPDK
Sbjct: 2 ILGVPPEASDDDIKRQYRKLAVLIHPDK 29
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.326 0.141 0.470
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,872,415
Number of Sequences: 59808
Number of extensions: 484922
Number of successful extensions: 1161
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 1106
Number of HSP's gapped (non-prelim): 38
length of query: 358
length of database: 16,821,457
effective HSP length: 83
effective length of query: 275
effective length of database: 11,857,393
effective search space: 3260783075
effective search space used: 3260783075
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 61 (28.7 bits)
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