GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000608-TA|BGIBMGA000608-PA|IPR001623|Heat shock protein
DnaJ, N-terminal
         (358 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ989013-1|ABK97614.1|  378|Anopheles gambiae gustatory receptor...    30   0.11 
AY825796-1|AAV70359.1|  174|Anopheles gambiae heat shock protein...    25   4.3  
AY825795-1|AAV70358.1|  174|Anopheles gambiae heat shock protein...    25   4.3  
AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic acetylch...    24   7.4  
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    23   9.8  

>DQ989013-1|ABK97614.1|  378|Anopheles gambiae gustatory receptor 24
           protein.
          Length = 378

 Score = 29.9 bits (64), Expect = 0.11
 Identities = 16/60 (26%), Positives = 25/60 (41%)

Query: 252 VKQCLIDTYQYAQHHGWYEVWKQIIDLSDPHGEQNAYKVLGLGPEATQQEITSTWRRLSR 311
           +  C++DT  Y     WY   + +   +    E     +  +GP A   E  S W RLS+
Sbjct: 160 IPYCVLDTITYMMGGYWYMACETLSITAKILAEDFQRALRHVGPAAKVSEYRSLWLRLSK 219


>AY825796-1|AAV70359.1|  174|Anopheles gambiae heat shock protein
           DnaJ protein.
          Length = 174

 Score = 24.6 bits (51), Expect = 4.3
 Identities = 9/15 (60%), Positives = 14/15 (93%)

Query: 327 AQERFMEIQQAYEIL 341
           A+ RF+EI+Q+YE+L
Sbjct: 2   AETRFVEIKQSYELL 16


>AY825795-1|AAV70358.1|  174|Anopheles gambiae heat shock protein
           DnaJ protein.
          Length = 174

 Score = 24.6 bits (51), Expect = 4.3
 Identities = 9/15 (60%), Positives = 14/15 (93%)

Query: 327 AQERFMEIQQAYEIL 341
           A+ RF+EI+Q+YE+L
Sbjct: 2   AETRFVEIKQSYELL 16


>AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 23.8 bits (49), Expect = 7.4
 Identities = 24/93 (25%), Positives = 40/93 (43%), Gaps = 8/93 (8%)

Query: 101 WGQMMMVAVPSDEIWGINFRYLNYLIPLVAALGVWTVGNIGHEQGTLKWPLLAAYVS--- 157
           +G + M+ VPSD IW  +    N        + + T   I + +G ++W   A Y S   
Sbjct: 96  YGGVQMLHVPSDHIWRPDIVLYNNADGNF-EVTLATKATI-YSEGLVEWKPPAIYKSSCE 153

Query: 158 YPLRYFIYDETVFFTIMVLSAALAFDSFSKQWR 190
             + YF +DE    T ++   +  +D F    R
Sbjct: 154 IDVEYFPFDEQ---TCVLKFGSWTYDGFKVDLR 183


>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 23.4 bits (48), Expect = 9.8
 Identities = 8/15 (53%), Positives = 11/15 (73%)

Query: 68  PKYVEDLIGRMIRNK 82
           PKY+ D+IG   RN+
Sbjct: 577 PKYLYDIIGNYFRNR 591


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.326    0.141    0.470 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 386,486
Number of Sequences: 2123
Number of extensions: 16408
Number of successful extensions: 77
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 74
Number of HSP's gapped (non-prelim): 5
length of query: 358
length of database: 516,269
effective HSP length: 65
effective length of query: 293
effective length of database: 378,274
effective search space: 110834282
effective search space used: 110834282
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 48 (23.4 bits)