Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000608-TA|BGIBMGA000608-PA|IPR001623|Heat shock protein
DnaJ, N-terminal
(358 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U29488-10|AAK93843.1| 813|Caenorhabditis elegans Dnaj domain (p... 60 2e-09
Z79759-5|CAB02140.2| 409|Caenorhabditis elegans Hypothetical pr... 56 3e-08
U88181-2|AAB42303.1| 491|Caenorhabditis elegans Dnaj domain (pr... 56 3e-08
AC024811-1|AAF60776.1| 494|Caenorhabditis elegans Dnaj domain (... 56 5e-08
Z35663-8|CAA84728.1| 249|Caenorhabditis elegans Hypothetical pr... 55 9e-08
Z73102-3|CAA97409.1| 337|Caenorhabditis elegans Hypothetical pr... 52 6e-07
U00058-4|AAD31932.3| 249|Caenorhabditis elegans Dnaj domain (pr... 50 2e-06
Z70284-16|CAE17884.1| 155|Caenorhabditis elegans Hypothetical p... 50 3e-06
Z66513-6|CAA91334.1| 331|Caenorhabditis elegans Hypothetical pr... 48 8e-06
Z47356-7|CAD31695.1| 249|Caenorhabditis elegans Hypothetical pr... 48 1e-05
Z92834-5|CAB07390.1| 402|Caenorhabditis elegans Hypothetical pr... 45 7e-05
U80451-1|AAB37835.1| 591|Caenorhabditis elegans Dnaj domain (pr... 43 3e-04
U40415-10|AAK39254.1| 215|Caenorhabditis elegans Dnaj domain (p... 42 5e-04
Z36238-2|CAA85274.1| 378|Caenorhabditis elegans Hypothetical pr... 42 7e-04
AL032652-6|CAA21710.2| 752|Caenorhabditis elegans Hypothetical ... 42 7e-04
AL032652-5|CAB63399.1| 579|Caenorhabditis elegans Hypothetical ... 42 7e-04
U70854-5|AAB09157.1| 589|Caenorhabditis elegans Dnaj domain (pr... 42 9e-04
AF016428-7|AAB65361.1| 439|Caenorhabditis elegans Dnaj domain (... 42 9e-04
L12018-4|AAK68342.1| 456|Caenorhabditis elegans Dnaj domain (pr... 41 0.001
L12018-3|AAK68343.1| 446|Caenorhabditis elegans Dnaj domain (pr... 41 0.001
AF022982-4|AAB69938.1| 296|Caenorhabditis elegans Dnaj domain (... 40 0.004
U80439-4|AAB37641.2| 274|Caenorhabditis elegans Dnaj domain (pr... 39 0.006
AL032657-15|CAA21734.1| 788|Caenorhabditis elegans Hypothetical... 38 0.011
Z81030-9|CAB02713.1| 191|Caenorhabditis elegans Hypothetical pr... 36 0.044
AL132859-4|CAB60492.1| 365|Caenorhabditis elegans Hypothetical ... 34 0.18
Z81113-2|CAB03279.1| 510|Caenorhabditis elegans Hypothetical pr... 33 0.31
Z73102-15|CAA97416.1| 401|Caenorhabditis elegans Hypothetical p... 32 0.72
L14745-13|AAR25658.1| 210|Caenorhabditis elegans Hypothetical p... 29 3.8
Z54216-2|CAA90945.1| 242|Caenorhabditis elegans Hypothetical pr... 29 5.1
AC024791-30|AAL32250.2| 2460|Caenorhabditis elegans Hypothetical... 29 6.7
>U29488-10|AAK93843.1| 813|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 8 protein.
Length = 813
Score = 60.1 bits (139), Expect = 2e-09
Identities = 30/58 (51%), Positives = 41/58 (70%), Gaps = 4/58 (6%)
Query: 284 EQNAYKVLGLGPEATQQEITSTWRRLSREHHPDKVKDENGRRAAQERFMEIQQAYEIL 341
+++ YKVLG+ A+ +EI S ++ L+RE HPDK KDE AA RFMEI +AYE+L
Sbjct: 20 KEDPYKVLGISRRASAKEIKSAYKSLAREWHPDKRKDE----AASGRFMEIAEAYEVL 73
>Z79759-5|CAB02140.2| 409|Caenorhabditis elegans Hypothetical
protein ZK858.5 protein.
Length = 409
Score = 56.4 bits (130), Expect = 3e-08
Identities = 54/196 (27%), Positives = 88/196 (44%), Gaps = 11/196 (5%)
Query: 11 FLAYIFWLFGGPFGVHHFYLRRDRHAFVWWTTLGGFGIGWLGEVFRIPRYVRDAN----- 65
++ I + GG FG H YL++ AFV+++TLG IGWL + F V + N
Sbjct: 11 WIVRIILIVGGLFGAHRLYLKQVPEAFVFFSTLGVLLIGWLYDSFMFKYEVNEYNQLINQ 70
Query: 66 -EDPKYVED-LIGRM--IRNKKPPFSMNRFTGMLMVGYSWGQMMMVAVPSDEIW-GINFR 120
E+ K E G+M ++K FS RF ++ G G +A W IN
Sbjct: 71 SENNKEKEKWKNGKMQASQSKFVDFSFTRFLYSVLYGSYIGLATWLACTVTFGWTDINLI 130
Query: 121 YLNYLIPLVAALGVWTVGNIGHEQGTLKWPLLAAYVSYPLRYFIYDETVFFTIMVLSAAL 180
++ L G++ +G G + L + +A++ S + + TVF I L+A +
Sbjct: 131 PFICVVALGITAGIYIIGQCGGQSRELSYIWMASFSSMFIMVRLAQTTVFRAIF-LTAIV 189
Query: 181 AFDSFSKQWRRTPRRH 196
+ ++ R RRH
Sbjct: 190 STVIGNRSARLKKRRH 205
>U88181-2|AAB42303.1| 491|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 7 protein.
Length = 491
Score = 56.4 bits (130), Expect = 3e-08
Identities = 22/59 (37%), Positives = 43/59 (72%)
Query: 283 GEQNAYKVLGLGPEATQQEITSTWRRLSREHHPDKVKDENGRRAAQERFMEIQQAYEIL 341
G+++ YK+LG+ A+++EIT +R+L+++ HPD DE ++ A+++F++I A E+L
Sbjct: 376 GKRDYYKILGVKRNASKREITKAYRKLAQKWHPDNFSDEEEKKKAEKKFIDIAAAKEVL 434
>AC024811-1|AAF60776.1| 494|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 28 protein.
Length = 494
Score = 55.6 bits (128), Expect = 5e-08
Identities = 21/59 (35%), Positives = 43/59 (72%)
Query: 283 GEQNAYKVLGLGPEATQQEITSTWRRLSREHHPDKVKDENGRRAAQERFMEIQQAYEIL 341
G+++ YK+LG+ A ++EIT +R+++++ HPD +DE ++ A+++F++I A E+L
Sbjct: 377 GKRDYYKILGVRRNANKREITKAYRKMAQKWHPDNFQDEKEKKKAEKKFIDIAAAKEVL 435
>Z35663-8|CAA84728.1| 249|Caenorhabditis elegans Hypothetical
protein T04A8.9 protein.
Length = 249
Score = 54.8 bits (126), Expect = 9e-08
Identities = 28/70 (40%), Positives = 45/70 (64%), Gaps = 3/70 (4%)
Query: 273 KQIIDLSDP-HGEQNAYKVLGLGPEATQQEITSTWRRLSREHHPDKVKDENGRRAAQERF 331
K+ + LS P +Q+ YKVLGL A+Q++I S + +LS++HHPD + + A ++F
Sbjct: 10 KRSLFLSVPCSSQQDHYKVLGLAQSASQKDIKSAYYKLSKQHHPD--TNPTNKEEAAKKF 67
Query: 332 MEIQQAYEIL 341
++ AYEIL
Sbjct: 68 HQVAMAYEIL 77
>Z73102-3|CAA97409.1| 337|Caenorhabditis elegans Hypothetical
protein B0035.2 protein.
Length = 337
Score = 52.0 bits (119), Expect = 6e-07
Identities = 25/60 (41%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 283 GEQNAYKVLGLGPEA-TQQEITSTWRRLSREHHPDKVKDENGRRAAQERFMEIQQAYEIL 341
G +N Y VL + E +Q++ +R L+R+HHPD+VK++ + A+ERF I AYE L
Sbjct: 33 GLENCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETL 92
>U00058-4|AAD31932.3| 249|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 24 protein.
Length = 249
Score = 50.4 bits (115), Expect = 2e-06
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 284 EQNAYKVLGLGPEATQQEITSTWRRLSREHHPDKVKDENGRRAAQERFMEIQQAYEIL 341
E + Y LG+ + EI +R+L+ + HPDK D+ + A+++F +I QAYEIL
Sbjct: 5 EDSPYITLGISSTSDDVEIKKAYRKLALKWHPDKHTDDKSKEEAEQKFKKIAQAYEIL 62
>Z70284-16|CAE17884.1| 155|Caenorhabditis elegans Hypothetical
protein K07F5.16 protein.
Length = 155
Score = 49.6 bits (113), Expect = 3e-06
Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Query: 284 EQNAYKVLGLGPEATQQEITSTWRRLSREHHPDKVKDENGRRAAQERFMEIQQAYEIL 341
E Y++LG ++ +IT+ +R R+ HPDKVK+ N + E+FME+Q AY IL
Sbjct: 13 EPKLYRLLGCDESSSIDQITAEYRARVRDCHPDKVKEHNTN--STEKFMELQNAYSIL 68
>Z66513-6|CAA91334.1| 331|Caenorhabditis elegans Hypothetical
protein F54D5.8 protein.
Length = 331
Score = 48.4 bits (110), Expect = 8e-06
Identities = 22/54 (40%), Positives = 34/54 (62%), Gaps = 4/54 (7%)
Query: 288 YKVLGLGPEATQQEITSTWRRLSREHHPDKVKDENGRRAAQERFMEIQQAYEIL 341
YKVLG+ AT EI +R+++ ++HPDK N A+ +F EI +AY++L
Sbjct: 6 YKVLGISKGATDDEIKKAYRKMALKYHPDK----NKEAGAENKFKEIAEAYDVL 55
>Z47356-7|CAD31695.1| 249|Caenorhabditis elegans Hypothetical
protein T15H9.7 protein.
Length = 249
Score = 47.6 bits (108), Expect = 1e-05
Identities = 20/54 (37%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 288 YKVLGLGPEATQQEITSTWRRLSREHHPDKVKDENGRRAAQERFMEIQQAYEIL 341
YK+LG+ A +I +R+L++E HPD+ +D+ A E+F ++ AYE+L
Sbjct: 26 YKILGVAKNANANQIKKAYRKLAKELHPDRNQDD---EMANEKFQDLSSAYEVL 76
>Z92834-5|CAB07390.1| 402|Caenorhabditis elegans Hypothetical
protein F39B2.10 protein.
Length = 402
Score = 45.2 bits (102), Expect = 7e-05
Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 6/58 (10%)
Query: 284 EQNAYKVLGLGPEATQQEITSTWRRLSREHHPDKVKDENGRRAAQERFMEIQQAYEIL 341
E Y VLG+ P+A+ E+ +R+++ + HPDK D E+F +I QAYE+L
Sbjct: 4 ETGYYDVLGVKPDASDNELKKAYRKMALKFHPDKNPD------GAEQFKQISQAYEVL 55
>U80451-1|AAB37835.1| 591|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 9 protein.
Length = 591
Score = 43.2 bits (97), Expect = 3e-04
Identities = 19/64 (29%), Positives = 37/64 (57%)
Query: 278 LSDPHGEQNAYKVLGLGPEATQQEITSTWRRLSREHHPDKVKDENGRRAAQERFMEIQQA 337
L D E + Y +L + +AT EI +R+ HPD+ D + ++ A+ F+++++A
Sbjct: 18 LLDEEEEIDFYAILNVPKDATDDEIIKAYRKRCLMFHPDRFVDNDEKKDAERVFVKLRRA 77
Query: 338 YEIL 341
+E+L
Sbjct: 78 HEVL 81
>U40415-10|AAK39254.1| 215|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 14 protein.
Length = 215
Score = 42.3 bits (95), Expect = 5e-04
Identities = 24/62 (38%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 280 DPHGEQNAYKVLGLGPEATQQEITSTWRRLSREHHPDKVKDENGRRAAQERFMEIQQAYE 339
DP + Y VLG+ AT EI +R+L+ +HPDK D G E F EI A
Sbjct: 32 DPKKGLHLYNVLGIQKNATDDEIKKAYRKLALRYHPDKNLD--GDPEKTEMFKEINYANA 89
Query: 340 IL 341
+L
Sbjct: 90 VL 91
>Z36238-2|CAA85274.1| 378|Caenorhabditis elegans Hypothetical
protein R74.4 protein.
Length = 378
Score = 41.9 bits (94), Expect = 7e-04
Identities = 20/58 (34%), Positives = 37/58 (63%), Gaps = 3/58 (5%)
Query: 284 EQNAYKVLGLGPEATQQEITSTWRRLSREHHPDKVKDENGRRAAQERFMEIQQAYEIL 341
E + Y++LG+ A++ EI S +R+L+ ++HPD+ ++ AQE F ++ AY +L
Sbjct: 15 EMDFYQLLGVEKMASEAEIKSAYRKLALKYHPDRNPND---AHAQEEFKKVSIAYSVL 69
>AL032652-6|CAA21710.2| 752|Caenorhabditis elegans Hypothetical
protein Y63D3A.6b protein.
Length = 752
Score = 41.9 bits (94), Expect = 7e-04
Identities = 16/48 (33%), Positives = 28/48 (58%)
Query: 273 KQIIDLSDPHGEQNAYKVLGLGPEATQQEITSTWRRLSREHHPDKVKD 320
K+ ++ H + + Y++LGL A ++ I WR +S+ HHPD+ D
Sbjct: 94 KKTTEIEQTHKDYDPYQILGLDQGADEKAIKKAWRDMSKIHHPDRGGD 141
>AL032652-5|CAB63399.1| 579|Caenorhabditis elegans Hypothetical
protein Y63D3A.6a protein.
Length = 579
Score = 41.9 bits (94), Expect = 7e-04
Identities = 16/48 (33%), Positives = 28/48 (58%)
Query: 273 KQIIDLSDPHGEQNAYKVLGLGPEATQQEITSTWRRLSREHHPDKVKD 320
K+ ++ H + + Y++LGL A ++ I WR +S+ HHPD+ D
Sbjct: 94 KKTTEIEQTHKDYDPYQILGLDQGADEKAIKKAWRDMSKIHHPDRGGD 141
>U70854-5|AAB09157.1| 589|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 11 protein.
Length = 589
Score = 41.5 bits (93), Expect = 9e-04
Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 4/74 (5%)
Query: 269 YEVWKQIIDLSDPHGEQNAYKVLGLGP---EATQQEITSTWRRLSREHHPDKVKDENGRR 325
YE + +D +D Q+ YKVLGL +AT EI +R+ +HHPDK K
Sbjct: 82 YEKYLMKLDPNDCKN-QDHYKVLGLSKLRWQATSDEIRFCYRQKVLKHHPDKKKHRGIVM 140
Query: 326 AAQERFMEIQQAYE 339
+E F I +AYE
Sbjct: 141 EKEEYFTCITKAYE 154
>AF016428-7|AAB65361.1| 439|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 19 protein.
Length = 439
Score = 41.5 bits (93), Expect = 9e-04
Identities = 20/54 (37%), Positives = 33/54 (61%), Gaps = 6/54 (11%)
Query: 288 YKVLGLGPEATQQEITSTWRRLSREHHPDKVKDENGRRAAQERFMEIQQAYEIL 341
Y L + P+A+Q +I ++ +L++E+HPDK D ++F EI AYE+L
Sbjct: 15 YTTLNVRPDASQADIKKSYFKLAKEYHPDKNPDHG------DKFKEISFAYEVL 62
>L12018-4|AAK68342.1| 456|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 10, isoform a
protein.
Length = 456
Score = 41.1 bits (92), Expect = 0.001
Identities = 19/58 (32%), Positives = 36/58 (62%), Gaps = 4/58 (6%)
Query: 284 EQNAYKVLGLGPEATQQEITSTWRRLSREHHPDKVKDENGRRAAQERFMEIQQAYEIL 341
+++ YK LG+ ++ + I + +L++++HP D N + AQ +F EI +AYE+L
Sbjct: 42 KEDYYKTLGVDKKSDAKAIKKAYFQLAKKYHP----DVNKTKEAQTKFQEISEAYEVL 95
>L12018-3|AAK68343.1| 446|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 10, isoform b
protein.
Length = 446
Score = 41.1 bits (92), Expect = 0.001
Identities = 19/58 (32%), Positives = 36/58 (62%), Gaps = 4/58 (6%)
Query: 284 EQNAYKVLGLGPEATQQEITSTWRRLSREHHPDKVKDENGRRAAQERFMEIQQAYEIL 341
+++ YK LG+ ++ + I + +L++++HP D N + AQ +F EI +AYE+L
Sbjct: 42 KEDYYKTLGVDKKSDAKAIKKAYFQLAKKYHP----DVNKTKEAQTKFQEISEAYEVL 95
>AF022982-4|AAB69938.1| 296|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 22 protein.
Length = 296
Score = 39.5 bits (88), Expect = 0.004
Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Query: 286 NAYKVLGLGPEATQQEITSTWRRLSREHHPDKVKDENGRRAAQERFMEIQQAYEIL 341
N YK+L L T +EI +R + HPDK D + A+ RF+E ++A++ L
Sbjct: 8 NPYKILHLEKGCTDKEIQKAYRAQCLKWHPDKNLD--NKEEAERRFIEAKEAFDFL 61
>U80439-4|AAB37641.2| 274|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 4 protein.
Length = 274
Score = 38.7 bits (86), Expect = 0.006
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 4/58 (6%)
Query: 284 EQNAYKVLGLGPEATQQEITSTWRRLSREHHPDKVKDENGRRAAQERFMEIQQAYEIL 341
++ Y+VLG+ AT EI S + S++ HPD +E +A F+E++ AY++L
Sbjct: 26 QRTHYEVLGVESTATLSEIKSAFYAQSKKVHPDNSSEE----SATASFLELKNAYDVL 79
>AL032657-15|CAA21734.1| 788|Caenorhabditis elegans Hypothetical
protein Y47H9C.5a protein.
Length = 788
Score = 37.9 bits (84), Expect = 0.011
Identities = 17/57 (29%), Positives = 36/57 (63%), Gaps = 3/57 (5%)
Query: 285 QNAYKVLGLGPEATQQEITSTWRRLSREHHPDKVKDENGRRAAQERFMEIQQAYEIL 341
++ Y++LG+ +A + I +++L+ + HPD+ D+ A + F++I +AYE+L
Sbjct: 19 EDYYELLGVERDADDRTIRKAFKKLAIKKHPDRNTDDPN---AHDEFVKINKAYEVL 72
>Z81030-9|CAB02713.1| 191|Caenorhabditis elegans Hypothetical
protein C01G10.12 protein.
Length = 191
Score = 35.9 bits (79), Expect = 0.044
Identities = 19/66 (28%), Positives = 38/66 (57%), Gaps = 9/66 (13%)
Query: 285 QNAYKVLGLGPEATQQEITSTWRRLSREHHPD---KVKDENGR------RAAQERFMEIQ 335
+N Y+++G+ AT+QEI + + +++ HPD K + R + E+FM ++
Sbjct: 17 KNYYEIIGVSASATRQEIRDAFLKKTKQLHPDQSRKSSKSDSRVGWATGSSETEQFMLVK 76
Query: 336 QAYEIL 341
+AY++L
Sbjct: 77 EAYDVL 82
>AL132859-4|CAB60492.1| 365|Caenorhabditis elegans Hypothetical
protein Y39C12A.8 protein.
Length = 365
Score = 33.9 bits (74), Expect = 0.18
Identities = 15/41 (36%), Positives = 24/41 (58%)
Query: 288 YKVLGLGPEATQQEITSTWRRLSREHHPDKVKDENGRRAAQ 328
YK+L + +A+ EI +R+ RE HPDK K + A++
Sbjct: 29 YKILNVDKKASPDEIRIAFRKRIREVHPDKCKHPSATEASK 69
>Z81113-2|CAB03279.1| 510|Caenorhabditis elegans Hypothetical
protein T03F6.2 protein.
Length = 510
Score = 33.1 bits (72), Expect = 0.31
Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 288 YKVLGLGPEATQQEITSTWRRLSREHHPDKVKDENGRRAAQERFMEIQQAYEIL 341
Y+VL + +A +I +R+L+ + HPDK D ++F +Q AY++L
Sbjct: 30 YEVLEVERDADDDKIKKNYRKLALKWHPDKNPDR--IEECTQQFRLLQAAYDVL 81
>Z73102-15|CAA97416.1| 401|Caenorhabditis elegans Hypothetical
protein B0035.14 protein.
Length = 401
Score = 31.9 bits (69), Expect = 0.72
Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
Query: 288 YKVLGLGPEATQQEITSTWRRLSREHHPDKVKDENGRRAAQERFMEIQQAYEIL 341
Y++L + +A+ +I +R+L+ + HPDK + + A E F + AY +L
Sbjct: 139 YEILKIDKKASDDDIRKEYRKLALKLHPDKCRAPH----ATEAFKALGNAYAVL 188
>L14745-13|AAR25658.1| 210|Caenorhabditis elegans Hypothetical
protein C02F5.13 protein.
Length = 210
Score = 29.5 bits (63), Expect = 3.8
Identities = 15/41 (36%), Positives = 21/41 (51%)
Query: 15 IFWLFGGPFGVHHFYLRRDRHAFVWWTTLGGFGIGWLGEVF 55
++ +F G V F L A TLGGFGI W+ ++F
Sbjct: 151 LYSIFLGVVAVDRFCLGYSAMAVGKLMTLGGFGIWWIVDIF 191
>Z54216-2|CAA90945.1| 242|Caenorhabditis elegans Hypothetical
protein T24H10.3 protein.
Length = 242
Score = 29.1 bits (62), Expect = 5.1
Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Query: 288 YKVLGLGPEATQQEITSTWRRLSREHHPDKVK-DENGRRAAQERFMEIQQAYEIL 341
Y++LG+ + ++ + + R S HPDK E + +F + +AY+IL
Sbjct: 16 YELLGVKKDCDEKALKKGYYRQSMRWHPDKSNLVEEDMQTYTTKFQLLNKAYQIL 70
>AC024791-30|AAL32250.2| 2460|Caenorhabditis elegans Hypothetical
protein Y47G6A.29 protein.
Length = 2460
Score = 28.7 bits (61), Expect = 6.7
Identities = 18/45 (40%), Positives = 21/45 (46%), Gaps = 4/45 (8%)
Query: 231 GDEVPIYEALHHFFTSPWWLDVKQCLIDTYQYAQHHGWYEVWKQI 275
GDE PIYEAL S WL V + + T H E WK +
Sbjct: 1580 GDEFPIYEALAPVMVS--WLSVVENFLRTVDKFIH--TVECWKSV 1620
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.326 0.141 0.470
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,891,998
Number of Sequences: 27539
Number of extensions: 381230
Number of successful extensions: 1054
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 1013
Number of HSP's gapped (non-prelim): 33
length of query: 358
length of database: 12,573,161
effective HSP length: 82
effective length of query: 276
effective length of database: 10,314,963
effective search space: 2846929788
effective search space used: 2846929788
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 60 (28.3 bits)
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