Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000607-TA|BGIBMGA000607-PA|IPR007087|Zinc finger,
C2H2-type, IPR000480|Glutelin
(286 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyce... 69 1e-12
SPAC144.09c |sfc2||RNA polymerase III transcription factor TFIII... 67 3e-12
SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyce... 56 6e-09
SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal binuc... 55 1e-08
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ... 54 3e-08
SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyce... 50 3e-07
SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces... 50 5e-07
SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces pom... 46 8e-06
SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces... 45 1e-05
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 43 6e-05
SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|ch... 42 1e-04
SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr... 36 0.009
SPAC1B1.01 |||transcription factor Rdp1|Schizosaccharomyces pomb... 33 0.062
SPAC24H6.13 |||DUF221 family protein|Schizosaccharomyces pombe|c... 30 0.44
SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces... 27 2.3
SPBC3F6.05 |rga1||GTPase activating protein Rga1|Schizosaccharom... 27 2.3
SPBP8B7.15c |||ubiquitin-protein ligase E3 RBBP6 family |Schizos... 27 3.1
SPAC1071.02 |||TFIIH regulator |Schizosaccharomyces pombe|chr 1|... 26 7.1
SPAC1782.11 |met14||adenylyl-sulfate kinase |Schizosaccharomyces... 26 7.1
SPCC1682.07 |ssl1||transcription factor TFIIH complex subunit Ss... 25 9.4
SPBC365.15 |alp4||gamma tubulin complex Spc97/GCP2 subunit Alp4|... 25 9.4
>SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 681
Score = 68.5 bits (160), Expect = 1e-12
Identities = 31/83 (37%), Positives = 49/83 (59%), Gaps = 2/83 (2%)
Query: 187 QLSHVCGV--CGKLFSRPWLLQGHLRSHTGEKPYGCAHCGKAFADRSNLRAHMQTHSSDK 244
Q ++VC C K F+R + L+ H+ +HT +P+ C+ C K+FA + + R H Q H+ K
Sbjct: 567 QGNYVCTFAGCNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQHDKRRHEQLHTGIK 626
Query: 245 NFECSRCHKTFALKSYLNKHQES 267
F C C++ FA LN+H +S
Sbjct: 627 AFACVTCNQRFARMDALNRHYKS 649
Score = 47.2 bits (107), Expect = 3e-06
Identities = 32/113 (28%), Positives = 49/113 (43%), Gaps = 4/113 (3%)
Query: 129 PKSKYTCSECGKRYATSSNLSRHKQTHRSLDSVAAKRCGECGKAYVSMPALAMHVLTHQ- 187
P+S+ S G + SS+ S+ K +S + G C K + L H+ TH
Sbjct: 539 PRSRSLNSLVGNKSENSSS-SKAKSESKSQGNYVCTFAG-CNKRFTRAYNLKSHMNTHTN 596
Query: 188 -LSHVCGVCGKLFSRPWLLQGHLRSHTGEKPYGCAHCGKAFADRSNLRAHMQT 239
C +C K F+R + H + HTG K + C C + FA L H ++
Sbjct: 597 YRPFQCSICKKSFARQHDKRRHEQLHTGIKAFACVTCNQRFARMDALNRHYKS 649
>SPAC144.09c |sfc2||RNA polymerase III transcription factor
TFIIIA|Schizosaccharomyces pombe|chr 1|||Manual
Length = 374
Score = 66.9 bits (156), Expect = 3e-12
Identities = 31/76 (40%), Positives = 47/76 (61%), Gaps = 4/76 (5%)
Query: 195 CGKLFSRPWLLQGHLRSHTGEKPYGCAH--CGKAFADRSNLRAHMQTHSSDKNFEC--SR 250
CGK +SRP LL+ HLR+H+ E+P+ C + C KAF +S+L+ H + H++ K F C
Sbjct: 30 CGKKYSRPSLLEQHLRTHSNERPFVCDYTGCSKAFYRKSHLKIHKRCHTNVKPFSCHYDG 89
Query: 251 CHKTFALKSYLNKHQE 266
C F + +L +H E
Sbjct: 90 CDAQFYTQQHLERHIE 105
Score = 56.8 bits (131), Expect = 3e-09
Identities = 42/142 (29%), Positives = 58/142 (40%), Gaps = 12/142 (8%)
Query: 137 ECGKRYATSSNLSRHKQTHRSLDSVAAKRCGECGKAYVSMPALAMHVLTHQ-----LSHV 191
ECGK+Y+ S L +H +TH + G C KA+ L +H H H
Sbjct: 29 ECGKKYSRPSLLEQHLRTHSNERPFVCDYTG-CSKAFYRKSHLKIHKRCHTNVKPFSCHY 87
Query: 192 CGVCGKLFSRPWLLQGHLRSHTGEKPYGCA--HCGKAFADRSNLRAHMQT-HSSDKNFEC 248
G C F L+ H+ H KPY C C + F+ LR+H+ H+ + C
Sbjct: 88 DG-CDAQFYTQQHLERHIEVHRKPKPYACTWEGCDECFSKHQQLRSHISACHTHLLPYPC 146
Query: 249 S--RCHKTFALKSYLNKHQESA 268
+ C FA K L H A
Sbjct: 147 TYQDCELRFATKQKLQNHVNRA 168
Score = 49.2 bits (112), Expect = 7e-07
Identities = 37/142 (26%), Positives = 55/142 (38%), Gaps = 10/142 (7%)
Query: 134 TCSECGKRYATSSNLSRH-KQTHRSLDSVAAKRCGECG-KAYVSMPALAMHVLTHQLSHV 191
T +C R+AT L H + H + S + G + + L H+ +
Sbjct: 147 TYQDCELRFATKQKLQNHVNRAHEKIISYSCPHESCVGHEGFEKWSQLQNHIREAHVPS- 205
Query: 192 CGVCGKLFSRPWLLQGHLRSHTG----EKPYGCAH--CGKAFADRSNLRAHMQT-HSSDK 244
C +CG+ F L+ H+ H K Y C C K+F S L+ H+ H +
Sbjct: 206 CSICGRQFKTAAHLRHHVVLHQTTLEERKTYHCPMEGCKKSFTRSSALKKHISVIHEGNM 265
Query: 245 NFECSRCHKTFALKSYLNKHQE 266
F C C F K L +H E
Sbjct: 266 AFHCDSCGTKFGYKHMLQRHLE 287
Score = 43.6 bits (98), Expect = 3e-05
Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 10/100 (10%)
Query: 134 TCSECGKRYATSSNLSRHKQTHR-SLDSVAAKRC--GECGKAYVSMPALAMHV-LTHQ-- 187
+CS CG+++ T+++L H H+ +L+ C C K++ AL H+ + H+
Sbjct: 205 SCSICGRQFKTAAHLRHHVVLHQTTLEERKTYHCPMEGCKKSFTRSSALKKHISVIHEGN 264
Query: 188 LSHVCGVCGKLFSRPWLLQGHLRSHT---GEKPYGCAHCG 224
++ C CG F +LQ HL T KPY CG
Sbjct: 265 MAFHCDSCGTKFGYKHMLQRHLERGTCKKAHKPY-INECG 303
Score = 39.1 bits (87), Expect = 7e-04
Identities = 26/99 (26%), Positives = 44/99 (44%), Gaps = 15/99 (15%)
Query: 166 CGECGKAYVSMPALAMHVLTHQLS------HVCGV--CGKLFSRPWLLQGHLRS-HTGEK 216
C CG+ + + L HV+ HQ + + C + C K F+R L+ H+ H G
Sbjct: 206 CSICGRQFKTAAHLRHHVVLHQTTLEERKTYHCPMEGCKKSFTRSSALKKHISVIHEGNM 265
Query: 217 PYGCAHCGKAFADRSNLRAHMQTHSSDKNFECSRCHKTF 255
+ C CG F + L+ H++ + C + HK +
Sbjct: 266 AFHCDSCGTKFGYKHMLQRHLERGT------CKKAHKPY 298
Score = 26.6 bits (56), Expect = 4.1
Identities = 25/118 (21%), Positives = 45/118 (38%), Gaps = 11/118 (9%)
Query: 128 EPKSKYTCSECGKRYATSSNLSRHKQTHRSLDSVAAKRCGECGKAYVSMPALAMH-VLTH 186
E + C CG ++ L RH + + ECG + + +A+H
Sbjct: 262 EGNMAFHCDSCGTKFGYKHMLQRHLE-RGTCKKAHKPYINECGIKHDGIEGVAIHDQKEK 320
Query: 187 QLSH--VCGVCGKLFSRPWLLQGHLRSHTGEKPYGCA--HCGKAFADRSNLRAHMQTH 240
+LS V V K+ + + GH + + Y C+ C F ++ H+ +H
Sbjct: 321 ELSSNLVSDVAKKIINE---VTGH--GYKEAREYSCSFPECNYRFKRLYDMHRHLNSH 373
>SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 56.0 bits (129), Expect = 6e-09
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Query: 195 CGKLFSRPWLLQGHLRSHTGEKPYGCAHCGKAFADRSNLRAHMQTHSSDKNFECSRCHKT 254
C K +R + ++ H+++H ++PY C C F +L+ H++ H + + + C C K
Sbjct: 450 CNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIHENGRPYVC-ECLKR 508
Query: 255 FALKSYLNKH-QESACVRDEDSTQ 277
F LN+H Q + CV D Q
Sbjct: 509 FNRLDALNRHKQRNICVGGVDRRQ 532
Score = 39.1 bits (87), Expect = 7e-04
Identities = 30/86 (34%), Positives = 37/86 (43%), Gaps = 8/86 (9%)
Query: 127 PEPKSKYTC--SECGKRYATSSNLSRHKQTHRSLDSVAAKRCGECGKAYVSMPALAMHVL 184
PE KY C + C KR A N+ H QTH S RC C +V L H+
Sbjct: 437 PEADGKYVCLYNGCNKRIARKYNVESHIQTHL---SDRPYRCDLCKAGFVRHHDLKRHLR 493
Query: 185 THQ--LSHVCGVCGKLFSRPWLLQGH 208
H+ +VC C K F+R L H
Sbjct: 494 IHENGRPYVC-ECLKRFNRLDALNRH 518
Score = 35.1 bits (77), Expect = 0.012
Identities = 23/72 (31%), Positives = 29/72 (40%), Gaps = 3/72 (4%)
Query: 169 CGKAYVSMPALAMHVLTH--QLSHVCGVCGKLFSRPWLLQGHLRSHTGEKPYGCAHCGKA 226
C K + H+ TH + C +C F R L+ HLR H +PY C C K
Sbjct: 450 CNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIHENGRPYVC-ECLKR 508
Query: 227 FADRSNLRAHMQ 238
F L H Q
Sbjct: 509 FNRLDALNRHKQ 520
>SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal
binuclear cluster type |Schizosaccharomyces pombe|chr
1|||Manual
Length = 522
Score = 55.2 bits (127), Expect = 1e-08
Identities = 27/51 (52%), Positives = 33/51 (64%), Gaps = 2/51 (3%)
Query: 192 CGVCGKLFSRPWLLQGHLRSHTGEKPYGC--AHCGKAFADRSNLRAHMQTH 240
C C + FSRP L+ H SHTGE+P+ C A CGKAF RSN+R H + H
Sbjct: 470 CTECLQGFSRPSSLKIHTYSHTGERPFVCDYAGCGKAFNVRSNMRRHQRIH 520
Score = 39.5 bits (88), Expect = 5e-04
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Query: 218 YGCAHCGKAFADRSNLRAHMQTHSSDKNFEC--SRCHKTFALKSYLNKHQ 265
Y C C + F+ S+L+ H +H+ ++ F C + C K F ++S + +HQ
Sbjct: 468 YRCTECLQGFSRPSSLKIHTYSHTGERPFVCDYAGCGKAFNVRSNMRRHQ 517
Score = 30.3 bits (65), Expect = 0.33
Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Query: 132 KYTCSECGKRYATSSNLSRHKQTHRSLDSVAAKRCGECGKAYVSMPALAMHVLTHQL 188
+Y C+EC + ++ S+L H +H G CGKA+ + H H L
Sbjct: 467 RYRCTECLQGFSRPSSLKIHTYSHTGERPFVCDYAG-CGKAFNVRSNMRRHQRIHGL 522
>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 582
Score = 53.6 bits (123), Expect = 3e-08
Identities = 27/53 (50%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 189 SHVCGVCGKLFSRPWLLQGHLRS-HTGEKPYGCAHCGKAFADRSNLRAHMQTH 240
S VC C K F R L+ H+RS HT EKP+ C CGK F+ R NLR H + H
Sbjct: 422 SFVCPECSKKFKRSEHLRRHIRSLHTSEKPFVCI-CGKRFSRRDNLRQHERLH 473
Score = 39.9 bits (89), Expect = 4e-04
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 214 GEKPYGCAHCGKAFADRSNLRAHMQT-HSSDKNFECSRCHKTFALKSYLNKHQ 265
G K + C C K F +LR H+++ H+S+K F C C K F+ + L +H+
Sbjct: 419 GGKSFVCPECSKKFKRSEHLRRHIRSLHTSEKPFVCI-CGKRFSRRDNLRQHE 470
Score = 38.3 bits (85), Expect = 0.001
Identities = 31/103 (30%), Positives = 41/103 (39%), Gaps = 7/103 (6%)
Query: 87 DTSAERPRETIAYTYDAFFVSDG---RSKRRSFANAPVECAQQPEPKSKYTCSECGKRYA 143
+TS P A +DG R KRR +N + P KS + C EC K++
Sbjct: 375 NTSGRSPNSMEATEQIGTIGTDGSMKRRKRRQPSNRKTSVPRSPGGKS-FVCPECSKKFK 433
Query: 144 TSSNLSRHKQTHRSLDSVAAKRCGECGKAYVSMPALAMHVLTH 186
S +L RH RSL + CGK + L H H
Sbjct: 434 RSEHLRRH---IRSLHTSEKPFVCICGKRFSRRDNLRQHERLH 473
Score = 33.5 bits (73), Expect = 0.035
Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 4/55 (7%)
Query: 166 CGECGKAYVSMPALAMHVL---THQLSHVCGVCGKLFSRPWLLQGHLRSHTGEKP 217
C EC K + L H+ T + VC +CGK FSR L+ H R H P
Sbjct: 425 CPECSKKFKRSEHLRRHIRSLHTSEKPFVC-ICGKRFSRRDNLRQHERLHVNASP 478
Score = 26.2 bits (55), Expect = 5.4
Identities = 11/37 (29%), Positives = 16/37 (43%)
Query: 231 SNLRAHMQTHSSDKNFECSRCHKTFALKSYLNKHQES 267
SN + + K+F C C K F +L +H S
Sbjct: 408 SNRKTSVPRSPGGKSFVCPECSKKFKRSEHLRRHIRS 444
>SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 428
Score = 50.4 bits (115), Expect = 3e-07
Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Query: 189 SHVCGVCGKLFSRPWLLQGHLRSHTGEKPYGCAH--CGKAFADRSNLRAHMQTH 240
S+ C C ++F R H+RSHTGEKP+ C++ C K F R L H++TH
Sbjct: 3 SYECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVRTH 56
Score = 38.3 bits (85), Expect = 0.001
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Query: 216 KPYGCAHCGKAFADRSNLRAHMQTHSSDKNFECS--RCHKTFALKSYLNKH 264
K Y C C + F + + H+++H+ +K FECS C K F + L +H
Sbjct: 2 KSYECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRH 52
>SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 897
Score = 49.6 bits (113), Expect = 5e-07
Identities = 24/83 (28%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Query: 205 LQGHLRSHT-GEKPYGCAH--CGKAFADRSNLRAHMQTHSSDKNFECSRCHKTFALKSYL 261
L+ R+H G+ + C + C K+F + +LR H +TH + K F CS C++ FA L
Sbjct: 12 LKKRSRAHRLGDPRFYCTYPDCPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFARSDVL 71
Query: 262 NKHQESACVRDEDSTQTDPTNSA 284
N+H + ++ ++ ++ N++
Sbjct: 72 NRHVQQMHLQKQNLSERRMLNAS 94
Score = 38.7 bits (86), Expect = 0.001
Identities = 17/44 (38%), Positives = 24/44 (54%)
Query: 195 CGKLFSRPWLLQGHLRSHTGEKPYGCAHCGKAFADRSNLRAHMQ 238
C K F+R L+ H R+H K + C+ C +AFA L H+Q
Sbjct: 33 CPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFARSDVLNRHVQ 76
Score = 36.3 bits (80), Expect = 0.005
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 7/77 (9%)
Query: 111 SKRRSFANAPVECAQQP----EPKSKYTCSECGKRYATSSNLSRHKQTHRSLDSVAAKRC 166
S SF P++ + +P+ T +C K + +L RH++TH ++V A C
Sbjct: 2 SNEESFTEKPLKKRSRAHRLGDPRFYCTYPDCPKSFTRKEHLRRHERTH---ENVKAFSC 58
Query: 167 GECGKAYVSMPALAMHV 183
C +A+ L HV
Sbjct: 59 SFCNRAFARSDVLNRHV 75
Score = 26.6 bits (56), Expect = 4.1
Identities = 11/34 (32%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 133 YTCSECGKRYATSSNLSRH-KQTHRSLDSVAAKR 165
++CS C + +A S L+RH +Q H +++ +R
Sbjct: 56 FSCSFCNRAFARSDVLNRHVQQMHLQKQNLSERR 89
>SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 781
Score = 45.6 bits (103), Expect = 8e-06
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Query: 214 GEKPYGCAH--CGKAFADRSNLRAHMQTHSSDKNFECSRCHKTFALKSYLNKHQESACVR 271
G+ Y C C K+F + + R H ++H++ K F C C +F LN+H V+
Sbjct: 13 GDIRYKCDFQGCTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLNRHVNQKHVK 72
Query: 272 DEDS-TQTDP 280
D+ +QT P
Sbjct: 73 QNDAGSQTHP 82
Score = 40.3 bits (90), Expect = 3e-04
Identities = 19/58 (32%), Positives = 26/58 (44%)
Query: 195 CGKLFSRPWLLQGHLRSHTGEKPYGCAHCGKAFADRSNLRAHMQTHSSDKNFECSRCH 252
C K F+R + H RSHT K + C HC +F L H+ +N S+ H
Sbjct: 24 CTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLNRHVNQKHVKQNDAGSQTH 81
>SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 567
Score = 44.8 bits (101), Expect = 1e-05
Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 7/56 (12%)
Query: 190 HVCGVCGKLFSRPWLLQGHLRSHTGEKPYGCAH-------CGKAFADRSNLRAHMQ 238
+VC C + F+R L+ H+RSHT EKP+ C+ CG+ F+ R L H Q
Sbjct: 70 YVCETCTRAFARLEHLKRHIRSHTNEKPFTCSEIDGLPTGCGRQFSRRDLLLRHQQ 125
Score = 41.1 bits (92), Expect = 2e-04
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 7/58 (12%)
Query: 216 KPYGCAHCGKAFADRSNLRAHMQTHSSDKNFECSR-------CHKTFALKSYLNKHQE 266
K Y C C +AFA +L+ H+++H+++K F CS C + F+ + L +HQ+
Sbjct: 68 KQYVCETCTRAFARLEHLKRHIRSHTNEKPFTCSEIDGLPTGCGRQFSRRDLLLRHQQ 125
Score = 27.9 bits (59), Expect = 1.8
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 127 PEPKSKYTCSECGKRYATSSNLSRHKQTH 155
P+ +Y C C + +A +L RH ++H
Sbjct: 64 PQKVKQYVCETCTRAFARLEHLKRHIRSH 92
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 42.7 bits (96), Expect = 6e-05
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Query: 192 CGVCGKLFSRPWLLQGHLRSHTGEKPYGCAH--CGKAFADRSNLRAHMQTHSS 242
C +C K F R H+R+HTGEKP+ C C K F+ L H + H++
Sbjct: 28 CPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRHARIHTN 80
Score = 37.1 bits (82), Expect = 0.003
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Query: 144 TSSNLSRHKQTHRSLDSVAAKRCGECGKAYVSMPALAMHVLTH--QLSHVCGV--CGKLF 199
T++ + ++ ++ D+ +C C KA+ + H+ TH + HVC C K F
Sbjct: 6 TATTTGKPSRSTKNPDAPRPYKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRF 65
Query: 200 SRPWLLQGHLRSHT 213
SR L H R HT
Sbjct: 66 SRSDELTRHARIHT 79
Score = 36.7 bits (81), Expect = 0.004
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Query: 216 KPYGCAHCGKAFADRSNLRAHMQTHSSDKNFECS--RCHKTFALKSYLNKH 264
+PY C C KAF + H++TH+ +K C+ C K F+ L +H
Sbjct: 24 RPYKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRH 74
Score = 27.9 bits (59), Expect = 1.8
Identities = 16/67 (23%), Positives = 23/67 (34%), Gaps = 1/67 (1%)
Query: 120 PVECAQQPEPKSKYTCSECGKRYATSSNLSRHKQTHRSLDSVAAKRCGECGKAYVSMPAL 179
P + P+ Y C C K + + +RH +TH G C K + L
Sbjct: 13 PSRSTKNPDAPRPYKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPG-CAKRFSRSDEL 71
Query: 180 AMHVLTH 186
H H
Sbjct: 72 TRHARIH 78
Score = 26.2 bits (55), Expect = 5.4
Identities = 9/23 (39%), Positives = 15/23 (65%)
Query: 138 CGKRYATSSNLSRHKQTHRSLDS 160
C KR++ S L+RH + H + +S
Sbjct: 61 CAKRFSRSDELTRHARIHTNANS 83
>SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 249
Score = 41.9 bits (94), Expect = 1e-04
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Query: 192 CGVCGKLFSRPWLLQGHLRSHTGEKPYGCA--HCGKAFADRSNLRAHMQT-HSSD 243
C G + + + L HLRSHTGEKP+ C+ C ++F L HM+T H +D
Sbjct: 80 CPRKGMVQTSRFALVAHLRSHTGEKPFICSVPECDRSFTRSDALAKHMRTVHEAD 134
Score = 33.9 bits (74), Expect = 0.027
Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 5/68 (7%)
Query: 220 CAHCGKAFADRSNLRAHMQTHSSDKNFECS--RCHKTFALKSYLNKHQESACVRDEDSTQ 277
C G R L AH+++H+ +K F CS C ++F L KH + V + D+ +
Sbjct: 80 CPRKGMVQTSRFALVAHLRSHTGEKPFICSVPECDRSFTRSDALAKHMRT--VHEADTLR 137
Query: 278 -TDPTNSA 284
+DP A
Sbjct: 138 PSDPIPKA 145
>SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 585
Score = 35.5 bits (78), Expect = 0.009
Identities = 12/39 (30%), Positives = 19/39 (48%)
Query: 128 EPKSKYTCSECGKRYATSSNLSRHKQTHRSLDSVAAKRC 166
+ K + C +C KR+ NL+RHK H + + C
Sbjct: 26 DSKRVFPCDQCAKRFTRHENLTRHKACHSKAEPIPCPYC 64
Score = 33.9 bits (74), Expect = 0.027
Identities = 16/54 (29%), Positives = 25/54 (46%)
Query: 192 CGVCGKLFSRPWLLQGHLRSHTGEKPYGCAHCGKAFADRSNLRAHMQTHSSDKN 245
C C K F+R L H H+ +P C +C + L+ H+Q +DK+
Sbjct: 33 CDQCAKRFTRHENLTRHKACHSKAEPIPCPYCEIKCKRKDLLKRHIQRFHNDKS 86
Score = 32.7 bits (71), Expect = 0.062
Identities = 14/50 (28%), Positives = 19/50 (38%)
Query: 215 EKPYGCAHCGKAFADRSNLRAHMQTHSSDKNFECSRCHKTFALKSYLNKH 264
++ + C C K F NL H HS + C C K L +H
Sbjct: 28 KRVFPCDQCAKRFTRHENLTRHKACHSKAEPIPCPYCEIKCKRKDLLKRH 77
>SPAC1B1.01 |||transcription factor Rdp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 478
Score = 32.7 bits (71), Expect = 0.062
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 5/56 (8%)
Query: 107 SDGRSKRRSFANAPVECAQQPE-PKSKYTCSECGKRYATSSNLSRHKQTHRSLDSV 161
S G S ANA ++QP P + + C +C + S L+ HK+T+ +++V
Sbjct: 116 SPGTLNGTSVANA----SKQPNMPNATFRCDKCDMMFVKQSGLTNHKRTYHQVETV 167
>SPAC24H6.13 |||DUF221 family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 871
Score = 29.9 bits (64), Expect = 0.44
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 7 GTLLSLPPKKKDIYRPYCLGDRAAHPDRPE 36
G L L P++K +Y+P C+ D ++PE
Sbjct: 28 GLFLCLRPREKHVYQPRCIIDTQPKEEKPE 57
>SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 442
Score = 27.5 bits (58), Expect = 2.3
Identities = 22/73 (30%), Positives = 30/73 (41%), Gaps = 8/73 (10%)
Query: 169 CGKAYVSMPALAMHVLTHQLSHVCGVCGKLFSRPWLLQGHLRSHTGEKPYGCAHCGKAFA 228
C KAY + L H L H G C + + H KPY C C K +
Sbjct: 357 CDKAYKNQNGLKYHKL-----H--GHCSPITTPTPAPIPHQGFVVENKPYRCEVCSKRYK 409
Query: 229 DRSNLRAHMQTHS 241
+ + L+ H +THS
Sbjct: 410 NLNGLKYH-RTHS 421
Score = 25.8 bits (54), Expect = 7.1
Identities = 11/34 (32%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 133 YTCSECGKRYATSSNLSRHK-QTHRSLDSVAAKR 165
Y C C KRY + L H+ +H + A+R
Sbjct: 399 YRCEVCSKRYKNLNGLKYHRTHSHLQVSMAQAQR 432
>SPBC3F6.05 |rga1||GTPase activating protein
Rga1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1150
Score = 27.5 bits (58), Expect = 2.3
Identities = 17/69 (24%), Positives = 26/69 (37%), Gaps = 5/69 (7%)
Query: 184 LTHQLSHVCGVCGKLFSRPWLLQGHLRSHTGEKPYGCAHCGKAFADRSNLRAHMQTHSSD 243
L + S +C VC +L G +R H GC C K + + ++
Sbjct: 477 LANASSDLCYVCHSALEEDCVLLGEIRCH-----IGCLSCTKCKYNNRENYDWARWNNQT 531
Query: 244 KNFECSRCH 252
K EC C+
Sbjct: 532 KQIECYLCY 540
>SPBP8B7.15c |||ubiquitin-protein ligase E3 RBBP6 family
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 482
Score = 27.1 bits (57), Expect = 3.1
Identities = 13/40 (32%), Positives = 17/40 (42%)
Query: 223 CGKAFADRSNLRAHMQTHSSDKNFECSRCHKTFALKSYLN 262
C D+ +QT D +FEC CH+ L LN
Sbjct: 293 CRTPCCDKLFCEECIQTALLDSDFECPNCHRKDVLLDTLN 332
>SPAC1071.02 |||TFIIH regulator |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1018
Score = 25.8 bits (54), Expect = 7.1
Identities = 8/33 (24%), Positives = 17/33 (51%)
Query: 154 THRSLDSVAAKRCGECGKAYVSMPALAMHVLTH 186
+ R L+ V K CG C + S+ ++++ +
Sbjct: 347 SQRLLEDVNVKSCGSCAAVFASLASISVETFNY 379
>SPAC1782.11 |met14||adenylyl-sulfate kinase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 25.8 bits (54), Expect = 7.1
Identities = 12/37 (32%), Positives = 17/37 (45%)
Query: 104 FFVSDGRSKRRSFANAPVECAQQPEPKSKYTCSECGK 140
F DG + PVE A+Q +PK Y + G+
Sbjct: 118 FHKKDGLPFIEVYVECPVEVAEQRDPKGLYKRARAGE 154
>SPCC1682.07 |ssl1||transcription factor TFIIH complex subunit
Ssl1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 421
Score = 25.4 bits (53), Expect = 9.4
Identities = 9/40 (22%), Positives = 15/40 (37%)
Query: 116 FANAPVECAQQPEPKSKYTCSECGKRYATSSNLSRHKQTH 155
F PV + +Y C C + ++ H+Q H
Sbjct: 372 FPKPPVSPFDESTSSMRYACPSCKNHFCLDCDVFAHEQLH 411
>SPBC365.15 |alp4||gamma tubulin complex Spc97/GCP2 subunit
Alp4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 784
Score = 25.4 bits (53), Expect = 9.4
Identities = 11/21 (52%), Positives = 15/21 (71%)
Query: 253 KTFALKSYLNKHQESACVRDE 273
KTF+ S LN HQ+ AC+ +E
Sbjct: 54 KTFSDPSNLNIHQQEACLINE 74
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.129 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,218,951
Number of Sequences: 5004
Number of extensions: 44971
Number of successful extensions: 198
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 116
Number of HSP's gapped (non-prelim): 60
length of query: 286
length of database: 2,362,478
effective HSP length: 72
effective length of query: 214
effective length of database: 2,002,190
effective search space: 428468660
effective search space used: 428468660
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 53 (25.4 bits)
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