Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000607-TA|BGIBMGA000607-PA|IPR007087|Zinc finger,
C2H2-type, IPR000480|Glutelin
(286 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g06634.1 68417.m01050 zinc finger (C2H2 type) family protein ... 68 8e-12
At1g72050.2 68414.m08328 zinc finger (C2H2 type) family protein ... 67 1e-11
At1g72050.1 68414.m08329 zinc finger (C2H2 type) family protein ... 67 1e-11
At1g68130.1 68414.m07782 zinc finger (C2H2 type) family protein ... 47 1e-05
At5g04240.1 68418.m00414 zinc finger (C2H2 type) family protein ... 47 2e-05
At1g25250.1 68414.m03133 zinc finger (C2H2 type) family protein ... 46 2e-05
At5g43170.1 68418.m05269 zinc finger (C2H2 type) protein 3 (AZF3... 46 4e-05
At5g04340.1 68418.m00426 zinc finger (C2H2 type) family protein ... 45 7e-05
At3g29340.1 68416.m03684 zinc finger (C2H2 type) family protein ... 44 9e-05
At1g27730.1 68414.m03389 zinc finger (C2H2 type) family protein ... 43 2e-04
At1g26590.1 68414.m03239 zinc finger (C2H2 type) family protein ... 43 2e-04
At2g01940.1 68415.m00129 zinc finger (C2H2 type) family protein ... 43 3e-04
At2g02080.1 68415.m00144 zinc finger (C2H2 type) family protein ... 42 4e-04
At1g55110.1 68414.m06294 zinc finger (C2H2 type) family protein ... 42 4e-04
At5g44160.1 68418.m05404 zinc finger (C2H2 type) family protein ... 42 5e-04
At3g19580.1 68416.m02483 zinc finger (C2H2 type) protein 2 (AZF2... 42 5e-04
At2g02070.1 68415.m00143 zinc finger (C2H2 type) family protein ... 42 6e-04
At1g51220.1 68414.m05761 zinc finger (C2H2 type) protein (WIP5) ... 42 6e-04
At1g03840.1 68414.m00365 zinc finger (C2H2 type) family protein ... 42 6e-04
At4g02670.1 68417.m00362 zinc finger (C2H2 type) family protein ... 41 8e-04
At3g48430.1 68416.m05287 zinc finger (C2H2 type) family protein ... 41 0.001
At3g46080.1 68416.m04986 zinc finger (C2H2 type) family protein ... 41 0.001
At3g20880.1 68416.m02640 zinc finger (C2H2 type) protein (WIP4) ... 40 0.001
At3g13810.1 68416.m01744 zinc finger (C2H2 type) family protein ... 40 0.001
At1g08290.1 68414.m00915 zinc finger (C2H2 type) protein (WIP3) ... 40 0.001
At5g56200.1 68418.m07012 zinc finger (C2H2 type) family protein ... 40 0.003
At5g03150.1 68418.m00263 zinc finger (C2H2 type) family protein ... 40 0.003
At3g50700.1 68416.m05547 zinc finger (C2H2 type) family protein ... 40 0.003
At1g14580.1 68414.m01734 zinc finger (C2H2 type) family protein ... 39 0.003
At3g49930.1 68416.m05460 zinc finger (C2H2 type) family protein ... 39 0.004
At5g66730.1 68418.m08412 zinc finger (C2H2 type) family protein ... 38 0.006
At3g60580.1 68416.m06777 zinc finger (C2H2 type) family protein ... 38 0.006
At3g57670.1 68416.m06425 zinc finger (C2H2 type) protein (WIP2) ... 38 0.006
At5g67450.1 68418.m08504 zinc finger (C2H2 type) protein 1 (AZF1... 38 0.008
At4g35280.1 68417.m05013 zinc finger (C2H2 type) family protein ... 38 0.008
At1g34790.1 68414.m04337 transparent testa 1 protein (TT1) / zin... 38 0.008
At5g60470.1 68418.m07584 zinc finger (C2H2 type) family protein ... 38 0.010
At3g46070.1 68416.m04985 zinc finger (C2H2 type) family protein ... 38 0.010
At2g17180.1 68415.m01984 zinc finger (C2H2 type) family protein ... 37 0.014
At3g46090.1 68416.m04987 zinc finger (C2H2 type) family protein ... 36 0.041
At2g28710.1 68415.m03490 zinc finger (C2H2 type) family protein ... 36 0.041
At3g45260.1 68416.m04887 zinc finger (C2H2 type) family protein ... 35 0.055
At2g45120.1 68415.m05615 zinc finger (C2H2 type) family protein ... 35 0.055
At1g26610.1 68414.m03241 zinc finger (C2H2 type) family protein ... 35 0.055
At1g49900.1 68414.m05596 zinc finger (C2H2 type) family protein ... 35 0.072
At5g61470.1 68418.m07713 zinc finger (C2H2 type) family protein ... 33 0.17
At5g59820.1 68418.m07500 zinc finger (C2H2 type) family protein ... 33 0.22
At5g04390.1 68418.m00431 zinc finger (C2H2 type) family protein ... 33 0.29
At3g10470.1 68416.m01255 zinc finger (C2H2 type) family protein ... 33 0.29
At5g01860.1 68418.m00105 zinc finger (C2H2 type) family protein ... 31 0.67
At5g22890.1 68418.m02677 zinc finger (C2H2 type) family protein ... 31 0.89
At2g42410.1 68415.m05249 zinc finger (C2H2 type) family protein ... 31 0.89
At2g18490.1 68415.m02155 zinc finger (C2H2 type) family protein ... 31 0.89
At4g04404.1 68417.m00636 zinc finger (C2H2 type) family protein ... 31 1.2
At1g34370.2 68414.m04268 zinc finger (C2H2 type) family protein ... 31 1.2
At1g34370.1 68414.m04267 zinc finger (C2H2 type) family protein ... 31 1.2
At1g10480.1 68414.m01180 zinc finger (C2H2 type) family protein ... 31 1.2
At4g15180.1 68417.m02328 SET domain-containing protein contains ... 30 1.6
At5g06070.1 68418.m00673 zinc finger (C2H2 type) family protein ... 30 2.0
At5g03510.1 68418.m00307 zinc finger (C2H2 type) family protein ... 30 2.0
At2g37430.1 68415.m04590 zinc finger (C2H2 type) family protein ... 30 2.0
At1g02030.1 68414.m00123 zinc finger (C2H2 type) family protein ... 30 2.0
At5g27880.1 68418.m03344 zinc finger (C2H2 type) family protein ... 29 2.7
At2g37740.1 68415.m04629 zinc finger (C2H2 type) family protein ... 29 2.7
At3g53820.1 68416.m05946 zinc finger (C2H2 type) family protein ... 29 3.6
At3g01460.1 68416.m00070 PHD finger family protein / methyl-CpG ... 29 3.6
At1g30970.1 68414.m03792 zinc finger (C2H2 type) family protein ... 29 3.6
At5g56280.1 68418.m07024 COP9 signalosome subunit 6 / CSN subuni... 29 4.7
At5g54360.1 68418.m06769 zinc finger (C2H2 type) family protein-... 29 4.7
At2g28200.1 68415.m03424 zinc finger (C2H2 type) family protein ... 29 4.7
At2g23740.1 68415.m02834 zinc finger (C2H2 type) family protein ... 29 4.7
At3g23130.1 68416.m02915 superman protein (SUP) / zinc finger (C... 28 6.3
At1g68360.1 68414.m07808 zinc finger protein-related similar to ... 28 6.3
At1g55050.1 68414.m06288 expressed protein ; expression supporte... 28 6.3
At1g15940.1 68414.m01913 expressed protein similar To androgen-i... 28 6.3
At5g52010.1 68418.m06454 zinc finger (C2H2 type) family protein ... 28 8.3
At4g35700.1 68417.m05067 zinc finger (C2H2 type) family protein ... 28 8.3
At4g16610.1 68417.m02512 zinc finger (C2H2 type) family protein ... 28 8.3
At3g42690.1 68416.m04439 Ulp1 protease family protein contains P... 28 8.3
>At4g06634.1 68417.m01050 zinc finger (C2H2 type) family protein
contains Pfam PF00096: Zinc finger, C2H2 type
Length = 387
Score = 67.7 bits (158), Expect = 8e-12
Identities = 41/103 (39%), Positives = 54/103 (52%), Gaps = 7/103 (6%)
Query: 169 CGKAYVSMPALAMHVLTH-QLSHVCGV--CGKLFSRPWLLQGHLRSHTGEKPYGCAH--C 223
CGK + + AL H H + +VC CGK F L+ H HTGE+ Y C + C
Sbjct: 86 CGKTFFDVSALRKHSHIHGERQYVCDQEGCGKKFLDSSKLKRHYLIHTGERNYICTYEGC 145
Query: 224 GKAFADRSNLRAHMQTHSSDKNFEC--SRCHKTFALKSYLNKH 264
GKAF+ NLR+HM+THS + C S C K +A + L H
Sbjct: 146 GKAFSLDFNLRSHMKTHSQENYHICPYSGCVKRYAHEYKLKNH 188
Score = 40.7 bits (91), Expect = 0.001
Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 7/87 (8%)
Query: 132 KYTCSE--CGKRYATSSNLSRHKQTHRSLDSVAAKRCGECGKAYVSMPALAMHVLTHQLS 189
+Y C + CGK++ SS L RH H + G CGKA+ L H+ TH
Sbjct: 107 QYVCDQEGCGKKFLDSSKLKRHYLIHTGERNYICTYEG-CGKAFSLDFNLRSHMKTHSQE 165
Query: 190 --HVC--GVCGKLFSRPWLLQGHLRSH 212
H+C C K ++ + L+ H+ ++
Sbjct: 166 NYHICPYSGCVKRYAHEYKLKNHVAAY 192
>At1g72050.2 68414.m08328 zinc finger (C2H2 type) family protein
contains multiple zinc finger domains: PF00096: Zinc
finger, C2H2 type
Length = 412
Score = 67.3 bits (157), Expect = 1e-11
Identities = 54/173 (31%), Positives = 79/173 (45%), Gaps = 21/173 (12%)
Query: 109 GRSKRRSFANAPVECAQQPEPKSKYTCSE--CGKRYATSSNLSRHKQTHRSLDSVAAKRC 166
G+ + + P EC+ + + C E CGK + S L +H+ +H LDSV A C
Sbjct: 194 GKDNNGNGDSQPAECSTG---QKQVVCKEIGCGKAFKYPSQLQKHQDSHVKLDSVEA-FC 249
Query: 167 GE--CGKAYVSMPALAMHVLT-HQLSHV-CGVCGKLFSRPWLLQGHLRSH-----TGEKP 217
E C K + + L H+ + HQ H+ C +CG + ++ HLR+H GE
Sbjct: 250 SEPGCMKYFTNEECLKSHIRSCHQ--HINCEICGSKHLKK-NIKRHLRTHDEDSSPGEIK 306
Query: 218 YGCAHCGKAFADRSNLRAHMQ-THSSDKNFECS--RCHKTFALKSYLNKHQES 267
C F+ SNL+ HM+ H + F C C FA K NKH+ S
Sbjct: 307 CEVEGCSSTFSKASNLQKHMKAVHDDIRPFVCGFPGCGMRFAYKHVRNKHENS 359
Score = 52.8 bits (121), Expect = 3e-07
Identities = 37/151 (24%), Positives = 68/151 (45%), Gaps = 19/151 (12%)
Query: 133 YTCSECGKRYATSSNLSRHKQTHRSLDSVAAKRCGECGKAYVSMPALAMHVLTHQLSHVC 192
Y C CG + + +++H Q+H ++ + C S +H C
Sbjct: 20 YLCQYCGISRSKNYLITKHIQSHHQMELEEERDDEACEVDEESSS-----------NHTC 68
Query: 193 GVCGKLFSRPWLLQGHLRSHTGEKPYGC--AHCGKAFADRSNLRAHMQTHSSDKNFECSR 250
CG F +P L+ H++SH+ E+ + C C ++ + +L H+ TH K F+C +
Sbjct: 69 QECGAEFKKPAHLKQHMQSHSLERSFTCYVDDCAASYRRKDHLNRHLLTHKG-KLFKCPK 127
Query: 251 --CHKTFALKSYLNKH---QESACVRDEDST 276
C F+++ + +H S RD+D+T
Sbjct: 128 ENCKSEFSVQGNVGRHVKKYHSNDNRDKDNT 158
Score = 44.8 bits (101), Expect = 7e-05
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 123 CAQQPEPKSKYTCSECGKRYATSSNLSRHKQTHRSLDSVAAKRCGECGKAYVSMPALAMH 182
C E S +TC ECG + ++L +H Q+H SL+ +C +Y L H
Sbjct: 56 CEVDEESSSNHTCQECGAEFKKPAHLKQHMQSH-SLERSFTCYVDDCAASYRRKDHLNRH 114
Query: 183 VLTHQ 187
+LTH+
Sbjct: 115 LLTHK 119
Score = 43.6 bits (98), Expect = 2e-04
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 20/96 (20%)
Query: 189 SHVCGVCGKLFSRPWLLQGHLRSH------------------TGEKPYGCAHCGKAFADR 230
+++C CG S+ +L+ H++SH + C CG F
Sbjct: 19 NYLCQYCGISRSKNYLITKHIQSHHQMELEEERDDEACEVDEESSSNHTCQECGAEFKKP 78
Query: 231 SNLRAHMQTHSSDKNFEC--SRCHKTFALKSYLNKH 264
++L+ HMQ+HS +++F C C ++ K +LN+H
Sbjct: 79 AHLKQHMQSHSLERSFTCYVDDCAASYRRKDHLNRH 114
>At1g72050.1 68414.m08329 zinc finger (C2H2 type) family protein
contains multiple zinc finger domains: PF00096: Zinc
finger, C2H2 type
Length = 324
Score = 67.3 bits (157), Expect = 1e-11
Identities = 54/173 (31%), Positives = 79/173 (45%), Gaps = 21/173 (12%)
Query: 109 GRSKRRSFANAPVECAQQPEPKSKYTCSE--CGKRYATSSNLSRHKQTHRSLDSVAAKRC 166
G+ + + P EC+ + + C E CGK + S L +H+ +H LDSV A C
Sbjct: 106 GKDNNGNGDSQPAECSTG---QKQVVCKEIGCGKAFKYPSQLQKHQDSHVKLDSVEA-FC 161
Query: 167 GE--CGKAYVSMPALAMHVLT-HQLSHV-CGVCGKLFSRPWLLQGHLRSH-----TGEKP 217
E C K + + L H+ + HQ H+ C +CG + ++ HLR+H GE
Sbjct: 162 SEPGCMKYFTNEECLKSHIRSCHQ--HINCEICGSKHLKK-NIKRHLRTHDEDSSPGEIK 218
Query: 218 YGCAHCGKAFADRSNLRAHMQ-THSSDKNFECS--RCHKTFALKSYLNKHQES 267
C F+ SNL+ HM+ H + F C C FA K NKH+ S
Sbjct: 219 CEVEGCSSTFSKASNLQKHMKAVHDDIRPFVCGFPGCGMRFAYKHVRNKHENS 271
>At1g68130.1 68414.m07782 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 419
Score = 47.2 bits (107), Expect = 1e-05
Identities = 33/143 (23%), Positives = 60/143 (41%), Gaps = 15/143 (10%)
Query: 132 KYTCSECGKRYATSSNLSRHKQTHRSLDSVAAKRCGE--CGKAYVSMPALAMHVLTHQLS 189
+Y C C + + NL H++ H+ + + E + YV +H
Sbjct: 69 RYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETNEEVRKRVYVCPEPTCLH------H 122
Query: 190 HVCGVCGKLFSRPWLLQGHLR-SHTGEKPYGCAHCGKAFADRSNLRAHMQTHSSDKNFEC 248
+ C G L ++ H R H+ K + C C K +A +S+ +AH++T + C
Sbjct: 123 NPCHALGDLVG----IKKHFRRKHSNHKQWICERCSKGYAVQSDYKAHLKT-CGTRGHSC 177
Query: 249 SRCHKTFALKSYLNKHQESACVR 271
C + F+ +HQ++ VR
Sbjct: 178 D-CGRVFSRVESFIEHQDTCTVR 199
>At5g04240.1 68418.m00414 zinc finger (C2H2 type) family protein /
transcription factor jumonji (jmj) family protein
contains Pfam domians PF02375: jmjN domain, PF02373: jmjC
domain and PF00096: Zinc finger, C2H2 type
Length = 1327
Score = 46.8 bits (106), Expect = 2e-05
Identities = 44/159 (27%), Positives = 57/159 (35%), Gaps = 17/159 (10%)
Query: 107 SDGRSKRRSFANAPVECAQQPEPKSKYTCSEC------GKRYATSSNLSRHKQTHRSLDS 160
S G +K++ + E PE + S C GKR AT +H +T
Sbjct: 1128 SMGEAKKKRKIESESETNDNPESSIGFIRSPCEGLRSRGKRKATCETSLKHTETSDEEKK 1187
Query: 161 VAAKRCGECGKAYVSMPALAMHVLTHQLSHVCGVCGKLFSRPWLLQGHLRSHTGEKPYGC 220
AKR + KA + TH C F LQ H R+ C
Sbjct: 1188 PIAKRLKKTPKACSGSRQQEVPTTTHPNRCYLEGCKMTFESKAKLQTHKRNR-------C 1240
Query: 221 AH--CGKAFADRSNLRAHMQTHSSDKNFECS--RCHKTF 255
H CGK F L H + H ++ FECS C TF
Sbjct: 1241 THEGCGKKFRAHKYLVLHQRVHKDERPFECSWKGCSMTF 1279
Score = 40.3 bits (90), Expect = 0.001
Identities = 25/74 (33%), Positives = 32/74 (43%), Gaps = 6/74 (8%)
Query: 169 CGKAYVSMPALAMHVLTH--QLSHVCGV--CGKLFSRPWLLQGHLRSHTGEKPYGCA--H 222
CGK + + L +H H + C C F W HLR HTGE+PY C
Sbjct: 1245 CGKKFRAHKYLVLHQRVHKDERPFECSWKGCSMTFKWQWARTEHLRLHTGERPYICKVDG 1304
Query: 223 CGKAFADRSNLRAH 236
CG +F S+ H
Sbjct: 1305 CGLSFRFVSDYSRH 1318
>At1g25250.1 68414.m03133 zinc finger (C2H2 type) family protein
contains zinc finger, C2H2 type, domain, PROSITE:PS00028
Length = 362
Score = 46.4 bits (105), Expect = 2e-05
Identities = 38/149 (25%), Positives = 63/149 (42%), Gaps = 16/149 (10%)
Query: 132 KYTCSECGKRYATSSNLSRHKQTHRSLDSVAA--KRCGECGK-AYVSM-PALAMHVLTHQ 187
+Y C C + + NL H++ H+ + K+ E K YV P H H
Sbjct: 38 RYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRDKKDEEVRKRVYVCPEPTCLHHDPCHA 97
Query: 188 LSHVCGVCGKLFSRPWLLQGHLRSHTGEKPYGCAHCGKAFADRSNLRAHMQTHSSDKNFE 247
L + G+ K R R H+ K + C C K +A +S+ +AH++T S +
Sbjct: 98 LGDLVGI--KKHFR--------RKHSVHKQWVCERCSKGYAVQSDYKAHLKTCGS-RGHS 146
Query: 248 CSRCHKTFALKSYLNKHQESACVRDEDST 276
C C + F+ +HQ++ +R T
Sbjct: 147 CD-CGRVFSRVESFIEHQDTCTIRQPQPT 174
>At5g43170.1 68418.m05269 zinc finger (C2H2 type) protein 3 (AZF3)
identical to Cys2/His2-type zinc finger protein 3
[Arabidopsis thaliana] gi|6009889|dbj|BAA85109
Length = 193
Score = 45.6 bits (103), Expect = 4e-05
Identities = 32/83 (38%), Positives = 39/83 (46%), Gaps = 14/83 (16%)
Query: 130 KSKYTCSECGKRYATSSNLSRHKQTHRSLDSVAAKRCGECGKAYVSMPALAMHVLTHQLS 189
K Y C C K +++ L HK +HRSL GE K S P+ A+ S
Sbjct: 72 KPSYKCGVCYKTFSSYQALGGHKASHRSLYGG-----GENDK---STPSTAVK------S 117
Query: 190 HVCGVCGKLFSRPWLLQGHLRSH 212
HVC VCGK F+ L GH R H
Sbjct: 118 HVCSVCGKSFATGQALGGHKRCH 140
Score = 35.5 bits (78), Expect = 0.041
Identities = 24/67 (35%), Positives = 29/67 (43%), Gaps = 15/67 (22%)
Query: 189 SHVCGVCGKLFSRPWLLQGHLRSH---------------TGEKPYGCAHCGKAFADRSNL 233
S+ CGVC K FS L GH SH T K + C+ CGK+FA L
Sbjct: 74 SYKCGVCYKTFSSYQALGGHKASHRSLYGGGENDKSTPSTAVKSHVCSVCGKSFATGQAL 133
Query: 234 RAHMQTH 240
H + H
Sbjct: 134 GGHKRCH 140
>At5g04340.1 68418.m00426 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 238
Score = 44.8 bits (101), Expect = 7e-05
Identities = 26/88 (29%), Positives = 39/88 (44%), Gaps = 2/88 (2%)
Query: 127 PEPKSKYTCSECGKRYATSSNLSRHKQTHRSLDSVAAKRCGE--CGKAYVSMPALAMHVL 184
P P Y CS C K +++ L HK +HR S+ G+ + ++ ++
Sbjct: 83 PLPTPIYKCSVCDKAFSSYQALGGHKASHRKSFSLTQSAGGDELSTSSAITTSGISGGGG 142
Query: 185 THQLSHVCGVCGKLFSRPWLLQGHLRSH 212
SHVC +C K F+ L GH R H
Sbjct: 143 GSVKSHVCSICHKSFATGQALGGHKRCH 170
Score = 33.1 bits (72), Expect = 0.22
Identities = 24/77 (31%), Positives = 31/77 (40%), Gaps = 3/77 (3%)
Query: 192 CGVCGKLFSRPWLLQGHLRSHTGEKPYGCAHCGKAFADRSNLRAHMQTHS---SDKNFEC 248
C VC K FS L GH SH + G + S + + S K+ C
Sbjct: 91 CSVCDKAFSSYQALGGHKASHRKSFSLTQSAGGDELSTSSAITTSGISGGGGGSVKSHVC 150
Query: 249 SRCHKTFALKSYLNKHQ 265
S CHK+FA L H+
Sbjct: 151 SICHKSFATGQALGGHK 167
Score = 31.1 bits (67), Expect = 0.89
Identities = 25/86 (29%), Positives = 34/86 (39%), Gaps = 5/86 (5%)
Query: 165 RCGECGKAYVSMPALAMHVLTHQ----LSHVCGVCGKLFSRPWLLQGHLRSHTGE-KPYG 219
+C C KA+ S AL H +H+ L+ G S G G K +
Sbjct: 90 KCSVCDKAFSSYQALGGHKASHRKSFSLTQSAGGDELSTSSAITTSGISGGGGGSVKSHV 149
Query: 220 CAHCGKAFADRSNLRAHMQTHSSDKN 245
C+ C K+FA L H + H KN
Sbjct: 150 CSICHKSFATGQALGGHKRCHYEGKN 175
>At3g29340.1 68416.m03684 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 650
Score = 44.4 bits (100), Expect = 9e-05
Identities = 27/111 (24%), Positives = 45/111 (40%), Gaps = 2/111 (1%)
Query: 106 VSDGRSKRRSFANAPVECAQQPEPKSKYTCSECGKRYATSSNLSRHKQTHRSLDSVAAKR 165
VS ++ + + + + KS + C CGK + L H++ HR + +K+
Sbjct: 16 VSQSGFEKSTTCSGVIALRSNLQSKSSHKCKICGKSFECYQALGGHQRIHRPIKEKLSKQ 75
Query: 166 CGECGKAYVSMPALAMHVLTHQLSHVCGVCGKLFSRPWLLQGHLRSHTGEK 216
E + Y L + + C VCGK+F L GH + H K
Sbjct: 76 --EFSEVYPRKSKLQKRPESSSSCYECKVCGKIFGCYRGLGGHTKLHRSTK 124
Score = 36.3 bits (80), Expect = 0.024
Identities = 28/101 (27%), Positives = 39/101 (38%), Gaps = 3/101 (2%)
Query: 184 LTHQLSHVCGVCGKLFSRPWLLQGHLRSHTGEKP-YGCAHCGKAFADRSNLRAHMQTHSS 242
L + SH C +CGK F L GH R H K + + +S L+ ++ SS
Sbjct: 37 LQSKSSHKCKICGKSFECYQALGGHQRIHRPIKEKLSKQEFSEVYPRKSKLQKRPESSSS 96
Query: 243 DKNFECSRCHKTFALKSYLNKHQESACVRDEDSTQTDPTNS 283
+EC C K F L H + + T NS
Sbjct: 97 C--YECKVCGKIFGCYRGLGGHTKLHRSTKRELASTQDENS 135
Score = 34.7 bits (76), Expect = 0.072
Identities = 25/90 (27%), Positives = 38/90 (42%), Gaps = 3/90 (3%)
Query: 157 SLDSVAAKRCGECGKAYVSMPALAMHVLTHQLSHVCGVCGKLFSRPWLLQGHL--RSHTG 214
+L S ++ +C CGK++ AL H H+ + + FS + + L R +
Sbjct: 36 NLQSKSSHKCKICGKSFECYQALGGHQRIHRPIKE-KLSKQEFSEVYPRKSKLQKRPESS 94
Query: 215 EKPYGCAHCGKAFADRSNLRAHMQTHSSDK 244
Y C CGK F L H + H S K
Sbjct: 95 SSCYECKVCGKIFGCYRGLGGHTKLHRSTK 124
Score = 33.5 bits (73), Expect = 0.17
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 130 KSKYTCSECGKRYATSSNLSRHKQTHRSLD-SVAAKR 165
KS C CGK + S L HK+ HR + +A KR
Sbjct: 195 KSSCHCKICGKSFVCSQGLGNHKRVHREISGKLACKR 231
Score = 31.5 bits (68), Expect = 0.67
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 120 PVECAQQPEPKSKYTCSECGKRYATSSNLSRHKQTHR 156
P+ Q + +S Y CS C K + S L H++ HR
Sbjct: 432 PLRRKLQKKSRSSYKCSICEKSFVCSQALGSHQRLHR 468
Score = 27.9 bits (59), Expect = 8.3
Identities = 9/31 (29%), Positives = 16/31 (51%)
Query: 215 EKPYGCAHCGKAFADRSNLRAHMQTHSSDKN 245
++ +GC CG+ F + H + HS + N
Sbjct: 321 QRLHGCKTCGRKFGTLKGVYGHQRMHSGNHN 351
>At1g27730.1 68414.m03389 zinc finger (C2H2 type) family protein
(ZAT10) / salt-tolerance zinc finger protein (STZ)
identical to salt-tolerance zinc finger protein
GB:CAA64820 GI:1565227 from [Arabidopsis thaliana];
contains Pfam domain, PF00096: Zinc finger, C2H2 type;
identical to cDNA zinc finger protein STZ/ZAT10
(STZ/ZAT10) GI:9965730
Length = 227
Score = 43.2 bits (97), Expect = 2e-04
Identities = 26/83 (31%), Positives = 36/83 (43%), Gaps = 1/83 (1%)
Query: 130 KSKYTCSECGKRYATSSNLSRHKQTHRSLDSVAAKRCGECGKAYVSMPALAMHVLTHQLS 189
K Y CS C K +++ L HK +HR S G+ + A+ + + S
Sbjct: 77 KLSYKCSVCDKTFSSYQALGGHKASHRKNLSQTLSGGGDDHSTSSATTTSAVTTGSGK-S 135
Query: 190 HVCGVCGKLFSRPWLLQGHLRSH 212
HVC +C K F L GH R H
Sbjct: 136 HVCTICNKSFPSGQALGGHKRCH 158
Score = 39.1 bits (87), Expect = 0.003
Identities = 24/79 (30%), Positives = 33/79 (41%)
Query: 187 QLSHVCGVCGKLFSRPWLLQGHLRSHTGEKPYGCAHCGKAFADRSNLRAHMQTHSSDKNF 246
+LS+ C VC K FS L GH SH + G + S T S K+
Sbjct: 77 KLSYKCSVCDKTFSSYQALGGHKASHRKNLSQTLSGGGDDHSTSSATTTSAVTTGSGKSH 136
Query: 247 ECSRCHKTFALKSYLNKHQ 265
C+ C+K+F L H+
Sbjct: 137 VCTICNKSFPSGQALGGHK 155
>At1g26590.1 68414.m03239 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 361
Score = 43.2 bits (97), Expect = 2e-04
Identities = 29/102 (28%), Positives = 45/102 (44%), Gaps = 7/102 (6%)
Query: 189 SHVCGVCGKLFSRPWLLQGHLRSHTGEKPYGC-AHCGKAFADRSNLRAHMQTHSSDKNFE 247
S +C C K F L GH+R HT E G + K D+ + A Q H +
Sbjct: 8 SFLCKYCYKTFPSGKALGGHIRIHTNENSVGYNGNKKKRLVDQRKMMA--QKHKQQQQVG 65
Query: 248 CSRCHKTF----ALKSYLNKHQESACVRDEDSTQTDPTNSAS 285
C C + F AL+ ++ H E + +D++Q+D + S
Sbjct: 66 CRECGRVFVSLKALRGHMACHGEVKKMLMDDNSQSDTESETS 107
Score = 38.7 bits (86), Expect = 0.004
Identities = 23/80 (28%), Positives = 32/80 (40%), Gaps = 1/80 (1%)
Query: 166 CGECGKAYVSMPALAMHVLTHQLSHVCGVCGKLFSRPWLLQGHL-RSHTGEKPYGCAHCG 224
C C K + S AL H+ H + G G R + + + H ++ GC CG
Sbjct: 11 CKYCYKTFPSGKALGGHIRIHTNENSVGYNGNKKKRLVDQRKMMAQKHKQQQQVGCRECG 70
Query: 225 KAFADRSNLRAHMQTHSSDK 244
+ F LR HM H K
Sbjct: 71 RVFVSLKALRGHMACHGEVK 90
Score = 32.3 bits (70), Expect = 0.38
Identities = 20/83 (24%), Positives = 33/83 (39%), Gaps = 2/83 (2%)
Query: 130 KSKYTCSECGKRYATSSNLSRHKQTHRSLDSVAAKRCGECGKAYVSMPALAMHVLTHQLS 189
++ + C C K + + L H + H + +SV G K V + Q
Sbjct: 6 ENSFLCKYCYKTFPSGKALGGHIRIHTNENSVGYN--GNKKKRLVDQRKMMAQKHKQQQQ 63
Query: 190 HVCGVCGKLFSRPWLLQGHLRSH 212
C CG++F L+GH+ H
Sbjct: 64 VGCRECGRVFVSLKALRGHMACH 86
>At2g01940.1 68415.m00129 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 439
Score = 42.7 bits (96), Expect = 3e-04
Identities = 33/144 (22%), Positives = 59/144 (40%), Gaps = 17/144 (11%)
Query: 132 KYTCSECGKRYATSSNLSRHKQTHRSLDSVAAKRCGECG---KAYVSMPALAMHVLTHQL 188
+Y C C + + NL H++ H+ + KR + YV +H
Sbjct: 66 RYICEICNQGFQRDQNLQMHRRRHK-VPWKLLKRDNNIEVKKRVYVCPEPTCLH------ 118
Query: 189 SHVCGVCGKLFSRPWLLQGHLR-SHTGEKPYGCAHCGKAFADRSNLRAHMQTHSSDKNFE 247
+ C G L ++ H R H+ K + C C K +A +S+ +AH++T +
Sbjct: 119 HNPCHALGDLVG----IKKHFRRKHSNHKQWVCERCSKGYAVQSDYKAHLKT-CGTRGHS 173
Query: 248 CSRCHKTFALKSYLNKHQESACVR 271
C C + F+ +HQ++ R
Sbjct: 174 CD-CGRVFSRVESFIEHQDNCSAR 196
>At2g02080.1 68415.m00144 zinc finger (C2H2 type) family protein
contains Pfam domain PF00096: Zinc finger, C2H2 type
Length = 516
Score = 42.3 bits (95), Expect = 4e-04
Identities = 38/154 (24%), Positives = 62/154 (40%), Gaps = 14/154 (9%)
Query: 131 SKYTCSECGKRYATSSNLSRHKQTHRSLDSVAAKRCGEC-GKAYVSMPALAMHVLTHQLS 189
+++ C C K + NL H++ H + K E K Y+ +H H S
Sbjct: 81 NRFICDVCNKGFQREQNLQLHRRGHNLPWKLKQKSTKEVKRKVYLCPEPTCVH---HDPS 137
Query: 190 HVCGVCGKLFSRPWLLQGHLRSHTGEKPYGCAHCGKAFADRSNLRAHMQTHSSDKNFECS 249
G + + + R H GEK + C C K +A +S+ +AH +T K + C
Sbjct: 138 RALG------DLTGIKKHYYRKH-GEKKWKCEKCSKRYAVQSDWKAHSKT-CGTKEYRCD 189
Query: 250 RCHKTFALKSYLNKHQESACVRDEDSTQTDPTNS 283
C F+ + H+ + C T +PT S
Sbjct: 190 -CGTIFSRRDSYITHR-AFCDALIQETARNPTVS 221
Score = 35.1 bits (77), Expect = 0.055
Identities = 30/115 (26%), Positives = 47/115 (40%), Gaps = 20/115 (17%)
Query: 178 ALAMHVLTHQLSHVCGVCGKLFSRPWLLQGHLRSH----------TGE---KPYGCAH-- 222
AL+ L +C VC K F R LQ H R H T E K Y C
Sbjct: 71 ALSPKTLMATNRFICDVCNKGFQREQNLQLHRRGHNLPWKLKQKSTKEVKRKVYLCPEPT 130
Query: 223 C-----GKAFADRSNLRAHMQTHSSDKNFECSRCHKTFALKSYLNKHQESACVRD 272
C +A D + ++ H +K ++C +C K +A++S H ++ ++
Sbjct: 131 CVHHDPSRALGDLTGIKKHYYRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTKE 185
Score = 29.5 bits (63), Expect = 2.7
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 130 KSKYTCSECGKRYATSSNLSRHKQT 154
+ K+ C +C KRYA S+ H +T
Sbjct: 156 EKKWKCEKCSKRYAVQSDWKAHSKT 180
>At1g55110.1 68414.m06294 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 455
Score = 42.3 bits (95), Expect = 4e-04
Identities = 37/153 (24%), Positives = 61/153 (39%), Gaps = 16/153 (10%)
Query: 131 SKYTCSECGKRYATSSNLSRHKQTHRSLDSVAAKRCGEC--GKAYVSM-PALAMHVLTHQ 187
+++ C C K + NL HK+ H + + + K YV P H +
Sbjct: 90 NRFICEVCNKGFQRDQNLQLHKRGHNLPWKLKQRSNKDVVRKKVYVCPEPGCVHHHPSRA 149
Query: 188 LSHVCGVCGKLFSRPWLLQGHLRSHTGEKPYGCAHCGKAFADRSNLRAHMQTHSSDKNFE 247
L + G+ F R H GEK + C C K +A +S+ +AH +T K ++
Sbjct: 150 LGDLTGIKKHFF----------RKH-GEKKWKCEKCSKKYAVQSDWKAHAKT-CGTKEYK 197
Query: 248 CSRCHKTFALKSYLNKHQESACVRDEDSTQTDP 280
C C F+ + H+ E+S + P
Sbjct: 198 CD-CGTLFSRRDSFITHRAFCDALAEESARAMP 229
Score = 39.5 bits (88), Expect = 0.003
Identities = 39/159 (24%), Positives = 66/159 (41%), Gaps = 25/159 (15%)
Query: 139 GKRYATS-SNLSRHKQTHRSLDSVAAKRC-GECGKAYVSMPALAMHVLTHQLSH--VCGV 194
G R TS SN+++H Q + + KR + G +A+ T ++ +C V
Sbjct: 37 GNRTETSGSNINQHHQEQCFVPQSSLKRKRNQPGNPDPEAEVMALSPKTLMATNRFICEV 96
Query: 195 CGKLFSRPWLLQGHLRSH--------------TGEKPY-----GCA--HCGKAFADRSNL 233
C K F R LQ H R H +K Y GC H +A D + +
Sbjct: 97 CNKGFQRDQNLQLHKRGHNLPWKLKQRSNKDVVRKKVYVCPEPGCVHHHPSRALGDLTGI 156
Query: 234 RAHMQTHSSDKNFECSRCHKTFALKSYLNKHQESACVRD 272
+ H +K ++C +C K +A++S H ++ ++
Sbjct: 157 KKHFFRKHGEKKWKCEKCSKKYAVQSDWKAHAKTCGTKE 195
Score = 29.1 bits (62), Expect = 3.6
Identities = 23/122 (18%), Positives = 47/122 (38%), Gaps = 11/122 (9%)
Query: 130 KSKYTCSECGKRYATSSNLSRHKQTHRSLDSVAAKRCGECGKAYVSMPALAMHVLTHQLS 189
+ K+ C +C K+YA S+ H +T + + +C +CG + + H
Sbjct: 166 EKKWKCEKCSKKYAVQSDWKAHAKTCGTKE----YKC-DCGTLFSRRDSFITH--RAFCD 218
Query: 190 HVCGVCGKLFSRPWLLQG----HLRSHTGEKPYGCAHCGKAFADRSNLRAHMQTHSSDKN 245
+ + P ++Q H H ++ G + + SNL M+ S +
Sbjct: 219 ALAEESARAMPNPIMIQASNSPHHHHHQTQQNIGFSSSSQNIISNSNLHGPMKQEESQHH 278
Query: 246 FE 247
++
Sbjct: 279 YQ 280
>At5g44160.1 68418.m05404 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 466
Score = 41.9 bits (94), Expect = 5e-04
Identities = 33/136 (24%), Positives = 55/136 (40%), Gaps = 13/136 (9%)
Query: 131 SKYTCSECGKRYATSSNLSRHKQTHRSLDSVAAKRCGECGK-AYVSMPALAMHVLTHQLS 189
+++ C CGK + NL H++ H + + E K YV +H H S
Sbjct: 64 NRFLCEVCGKGFQRDQNLQLHRRGHNLPWKLKQRTSKEVRKRVYVCPEKTCVH---HHSS 120
Query: 190 HVCGVCGKLFSRPWLLQGHLRSHTGEKPYGCAHCGKAFADRSNLRAHMQTHSSDKNFECS 249
G + + R H GEK + C C K +A +S+ +AH +T + + C
Sbjct: 121 RALG------DLTGIKKHFCRKH-GEKKWTCEKCAKRYAVQSDWKAHSKT-CGTREYRCD 172
Query: 250 RCHKTFALKSYLNKHQ 265
C F+ + H+
Sbjct: 173 -CGTIFSRRDSFITHR 187
Score = 37.5 bits (83), Expect = 0.010
Identities = 26/102 (25%), Positives = 42/102 (41%), Gaps = 20/102 (19%)
Query: 191 VCGVCGKLFSRPWLLQGHLRSHT-------------GEKPYGCA-------HCGKAFADR 230
+C VCGK F R LQ H R H ++ Y C H +A D
Sbjct: 67 LCEVCGKGFQRDQNLQLHRRGHNLPWKLKQRTSKEVRKRVYVCPEKTCVHHHSSRALGDL 126
Query: 231 SNLRAHMQTHSSDKNFECSRCHKTFALKSYLNKHQESACVRD 272
+ ++ H +K + C +C K +A++S H ++ R+
Sbjct: 127 TGIKKHFCRKHGEKKWTCEKCAKRYAVQSDWKAHSKTCGTRE 168
Score = 31.9 bits (69), Expect = 0.51
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 130 KSKYTCSECGKRYATSSNLSRHKQT 154
+ K+TC +C KRYA S+ H +T
Sbjct: 139 EKKWTCEKCAKRYAVQSDWKAHSKT 163
>At3g19580.1 68416.m02483 zinc finger (C2H2 type) protein 2 (AZF2)
identical to Cys2/His2-type zinc finger protein 2
[Arabidopsis thaliana] gi|6009885|dbj|BAA85107
Length = 273
Score = 41.9 bits (94), Expect = 5e-04
Identities = 27/91 (29%), Positives = 40/91 (43%), Gaps = 5/91 (5%)
Query: 127 PEPKSK---YTCSECGKRYATSSNLSRHKQTHR-SLDSVAAKRCGECGKAYVSMPALAMH 182
P P+SK Y C+ C K + + L HK +HR +V + + +S+ A H
Sbjct: 97 PPPESKNLPYKCNVCEKAFPSYQALGGHKASHRIKPPTVISTTADDSTAPTISIVAGEKH 156
Query: 183 -VLTHQLSHVCGVCGKLFSRPWLLQGHLRSH 212
+ H C +C K+F L GH R H
Sbjct: 157 PIAASGKIHECSICHKVFPTGQALGGHKRCH 187
Score = 32.3 bits (70), Expect = 0.38
Identities = 24/81 (29%), Positives = 31/81 (38%), Gaps = 3/81 (3%)
Query: 188 LSHVCGVCGKLFSRPWLLQGHLRSHTGEKPYGCAHCGKAFADRSNLRAHMQTH---SSDK 244
L + C VC K F L GH SH + P + + + H +S K
Sbjct: 104 LPYKCNVCEKAFPSYQALGGHKASHRIKPPTVISTTADDSTAPTISIVAGEKHPIAASGK 163
Query: 245 NFECSRCHKTFALKSYLNKHQ 265
ECS CHK F L H+
Sbjct: 164 IHECSICHKVFPTGQALGGHK 184
>At2g02070.1 68415.m00143 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 602
Score = 41.5 bits (93), Expect = 6e-04
Identities = 37/156 (23%), Positives = 63/156 (40%), Gaps = 14/156 (8%)
Query: 131 SKYTCSECGKRYATSSNLSRHKQTHRSLDSVAAKRCGEC-GKAYVSMPALAMHVLTHQLS 189
+++ C C K + NL H++ H + K E K Y+ +H H S
Sbjct: 79 NRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKSTKEVKRKVYLCPEPSCVH---HDPS 135
Query: 190 HVCGVCGKLFSRPWLLQGHLRSHTGEKPYGCAHCGKAFADRSNLRAHMQTHSSDKNFECS 249
G + + + R H GEK + C C K +A +S+ +AH +T K + C
Sbjct: 136 RALG------DLTGIKKHYYRKH-GEKKWKCDKCSKRYAVQSDWKAHSKT-CGTKEYRCD 187
Query: 250 RCHKTFALKSYLNKHQESACVRDEDSTQTDPTNSAS 285
C F+ + H+ ++S + PT+ S
Sbjct: 188 -CGTLFSRRDSFITHRAFCDALAQESAR-HPTSLTS 221
Score = 35.1 bits (77), Expect = 0.055
Identities = 30/115 (26%), Positives = 47/115 (40%), Gaps = 20/115 (17%)
Query: 178 ALAMHVLTHQLSHVCGVCGKLFSRPWLLQGHLRSH----------TGE---KPY-----G 219
AL+ L +C VC K F R LQ H R H T E K Y
Sbjct: 69 ALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKSTKEVKRKVYLCPEPS 128
Query: 220 CAHC--GKAFADRSNLRAHMQTHSSDKNFECSRCHKTFALKSYLNKHQESACVRD 272
C H +A D + ++ H +K ++C +C K +A++S H ++ ++
Sbjct: 129 CVHHDPSRALGDLTGIKKHYYRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTKE 183
Score = 29.5 bits (63), Expect = 2.7
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 130 KSKYTCSECGKRYATSSNLSRHKQT 154
+ K+ C +C KRYA S+ H +T
Sbjct: 154 EKKWKCDKCSKRYAVQSDWKAHSKT 178
>At1g51220.1 68414.m05761 zinc finger (C2H2 type) protein (WIP5)
identical to WIP5 protein [Arabidopsis thaliana]
gi|18376498|emb|CAC86167; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 337
Score = 41.5 bits (93), Expect = 6e-04
Identities = 23/60 (38%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Query: 205 LQGHLRSHTGEKPYGCAHCGKAFADRSNLRAHMQTHSSDKNFECSRCHKTFALKSYLNKH 264
LQ H + G KP+ C CGKAFA + + R H + + K + CS C F K L H
Sbjct: 249 LQTHYKRKHGSKPFACRMCGKAFAVKGDWRTHEK--NCGKLWYCS-CGSDFKHKRSLKDH 305
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/43 (30%), Positives = 19/43 (44%)
Query: 225 KAFADRSNLRAHMQTHSSDKNFECSRCHKTFALKSYLNKHQES 267
K D L+ H + K F C C K FA+K H+++
Sbjct: 241 KPLKDFRTLQTHYKRKHGSKPFACRMCGKAFAVKGDWRTHEKN 283
>At1g03840.1 68414.m00365 zinc finger (C2H2 type) family protein
contains Zinc finger,C2H2 type,domain contains Pfam
domain, PF00096: Zinc finger, C2H2 type
Length = 506
Score = 41.5 bits (93), Expect = 6e-04
Identities = 38/156 (24%), Positives = 64/156 (41%), Gaps = 16/156 (10%)
Query: 131 SKYTCSECGKRYATSSNLSRHKQTHRSLDSVAAKRCGECGK-AYVSMPALAMHVLTHQLS 189
+++ C CGK + NL H++ H + + E K YV +H
Sbjct: 68 NRFLCEICGKGFQRDQNLQLHRRGHNLPWKLKQRTSKEVRKRVYVCPEKSCVH------H 121
Query: 190 HVCGVCGKLFSRPWLLQGHLRSHTGEKPYGCAHCGKAFADRSNLRAHMQTHSSDKNFECS 249
H G L ++ H GEK + C C K +A +S+ +AH +T + + C
Sbjct: 122 HPTRALGDLTG----IKKHFCRKHGEKKWKCEKCAKRYAVQSDWKAHSKT-CGTREYRCD 176
Query: 250 RCHKTFALKSYLNKHQESACVRDEDSTQTDPTNSAS 285
C F+ + H+ + C D + +T N+AS
Sbjct: 177 -CGTIFSRRDSFITHR-AFC--DALAEETARLNAAS 208
Score = 36.7 bits (81), Expect = 0.018
Identities = 28/115 (24%), Positives = 47/115 (40%), Gaps = 20/115 (17%)
Query: 178 ALAMHVLTHQLSHVCGVCGKLFSRPWLLQGHLRSHT-------------GEKPYGCA--- 221
AL+ L +C +CGK F R LQ H R H ++ Y C
Sbjct: 58 ALSPKTLMATNRFLCEICGKGFQRDQNLQLHRRGHNLPWKLKQRTSKEVRKRVYVCPEKS 117
Query: 222 ----HCGKAFADRSNLRAHMQTHSSDKNFECSRCHKTFALKSYLNKHQESACVRD 272
H +A D + ++ H +K ++C +C K +A++S H ++ R+
Sbjct: 118 CVHHHPTRALGDLTGIKKHFCRKHGEKKWKCEKCAKRYAVQSDWKAHSKTCGTRE 172
Score = 29.5 bits (63), Expect = 2.7
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 130 KSKYTCSECGKRYATSSNLSRHKQT 154
+ K+ C +C KRYA S+ H +T
Sbjct: 143 EKKWKCEKCAKRYAVQSDWKAHSKT 167
>At4g02670.1 68417.m00362 zinc finger (C2H2 type) family protein
similar to potato PCP1 zinc finger protein, GenBank
accession number X82328 contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 402
Score = 41.1 bits (92), Expect = 8e-04
Identities = 36/157 (22%), Positives = 61/157 (38%), Gaps = 14/157 (8%)
Query: 131 SKYTCSECGKRYATSSNLSRHKQTHRSLDSVAAKRCGE--CGKAYVSMPALAMHVLTHQL 188
+++ C C K + NL H++ H + K E K YV H
Sbjct: 80 NRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQKNTKEQQKKKVYVCPETNCAH------ 133
Query: 189 SHVCGVCGKLFSRPWLLQGHLRSHTGEKPYGCAHCGKAFADRSNLRAHMQTHSSDKNFEC 248
H G L ++ H GEK + C C K +A +S+ +AH + +++ C
Sbjct: 134 HHPSRALGDLTG----IKKHFCRKHGEKKWKCEKCSKFYAVQSDWKAHTKI-CGTRDYRC 188
Query: 249 SRCHKTFALKSYLNKHQESACVRDEDSTQTDPTNSAS 285
C F+ K H+ E+S + T+S++
Sbjct: 189 D-CGTLFSRKDTFITHRAFCDALAEESARLHSTSSSN 224
Score = 36.7 bits (81), Expect = 0.018
Identities = 30/116 (25%), Positives = 45/116 (38%), Gaps = 21/116 (18%)
Query: 178 ALAMHVLTHQLSHVCGVCGKLFSRPWLLQGHLRSHT--------------GEKPYGCA-- 221
AL+ L VC +C K F R LQ H R H +K Y C
Sbjct: 70 ALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQKNTKEQQKKKVYVCPET 129
Query: 222 -----HCGKAFADRSNLRAHMQTHSSDKNFECSRCHKTFALKSYLNKHQESACVRD 272
H +A D + ++ H +K ++C +C K +A++S H + RD
Sbjct: 130 NCAHHHPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKFYAVQSDWKAHTKICGTRD 185
>At3g48430.1 68416.m05287 zinc finger (C2H2 type) family protein /
transcription factor jumonji (jmj) family protein
contains Pfam domains PF02375: jmjN domain, PF02373: jmjC
domain and PF00096: Zinc finger, C2H2 type
Length = 1354
Score = 40.7 bits (91), Expect = 0.001
Identities = 25/74 (33%), Positives = 30/74 (40%), Gaps = 6/74 (8%)
Query: 169 CGKAYVSMPALAMHVLTHQ----LSHVCGVCGKLFSRPWLLQGHLRSHTGEKPYGCAH-- 222
CGK + S L H H L C F W H+R HTG +PY CA
Sbjct: 1267 CGKNFFSHKYLVQHQRVHSDDRPLKCPWKGCKMTFKWAWSRTEHIRVHTGARPYVCAEPD 1326
Query: 223 CGKAFADRSNLRAH 236
CG+ F S+ H
Sbjct: 1327 CGQTFRFVSDFSRH 1340
Score = 28.3 bits (60), Expect = 6.3
Identities = 13/35 (37%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
Query: 223 CGKAFADRSNLRAHMQTHSSDKNFEC--SRCHKTF 255
CGK F L H + HS D+ +C C TF
Sbjct: 1267 CGKNFFSHKYLVQHQRVHSDDRPLKCPWKGCKMTF 1301
>At3g46080.1 68416.m04986 zinc finger (C2H2 type) family protein
contains zinc finger, C2H2 type, domain, PROSITE:PS00028
Length = 164
Score = 40.7 bits (91), Expect = 0.001
Identities = 34/152 (22%), Positives = 58/152 (38%), Gaps = 10/152 (6%)
Query: 97 IAYTYDAFFVSDGRSKRRSFANAPVECAQQPEPKSKYTCSECGKRYATSSNLSRHKQTHR 156
+A + + V D +K + EC E K + C C K +++ L H+ +H+
Sbjct: 2 VARSEEVEIVEDTAAKCLMLLSRVGECGGGGE-KRVFRCKTCLKEFSSFQALGGHRASHK 60
Query: 157 SLDSVAAKRCGECGKAYVSMPALAMHVLTHQLSHVCGVCGKLFSRPWLLQGHLRSHTGEK 216
L + + + +L+ SH C +CG F L GH+R H EK
Sbjct: 61 KLINSSDPSL---------LGSLSNKKTKTATSHPCPICGVEFPMGQALGGHMRRHRSEK 111
Query: 217 PYGCAHCGKAFADRSNLRAHMQTHSSDKNFEC 248
++F + ++ SS K C
Sbjct: 112 ASPGTLVTRSFLPETTTVTTLKKSSSGKRVAC 143
>At3g20880.1 68416.m02640 zinc finger (C2H2 type) protein (WIP4)
identical to WIP4 protein [Arabidopsis thaliana]
gi|18376500|emb|CAC86168; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 412
Score = 40.3 bits (90), Expect = 0.001
Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Query: 205 LQGHLRSHTGEKPYGCAHCGKAFADRSNLRAHMQTHSSDKNFECSRCHKTFALKSYLNKH 264
LQ H + G +P+ C CGKAFA + + R H + + K + CS C F K L H
Sbjct: 327 LQTHYKRKHGVRPFACRRCGKAFAVKGDWRTHEK--NCGKLWYCS-CGSDFKHKRSLKDH 383
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/39 (30%), Positives = 19/39 (48%)
Query: 229 DRSNLRAHMQTHSSDKNFECSRCHKTFALKSYLNKHQES 267
D L+ H + + F C RC K FA+K H+++
Sbjct: 323 DFRTLQTHYKRKHGVRPFACRRCGKAFAVKGDWRTHEKN 361
>At3g13810.1 68416.m01744 zinc finger (C2H2 type) family protein
similar to finger protein pcp1 GB:S48856 from [Solanum
tuberosum] contains Pfam domain, PF00096: Zinc finger,
C2H2 type
Length = 513
Score = 40.3 bits (90), Expect = 0.001
Identities = 34/137 (24%), Positives = 55/137 (40%), Gaps = 14/137 (10%)
Query: 131 SKYTCSECGKRYATSSNLSRHKQTHRSLDSVAAKRCGEC--GKAYVSMPALAMHVLTHQL 188
+++ C C K + NL H++ H + + E K YV A +H H
Sbjct: 97 NRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRSNKEVIRKKVYVCPEASCVH---HDP 153
Query: 189 SHVCGVCGKLFSRPWLLQGHLRSHTGEKPYGCAHCGKAFADRSNLRAHMQTHSSDKNFEC 248
S G + + R H GEK + C C K +A +S+ +AH +T K + C
Sbjct: 154 SRALG------DLTGIKKHFCRKH-GEKKWKCDKCSKKYAVQSDCKAHSKT-CGTKEYRC 205
Query: 249 SRCHKTFALKSYLNKHQ 265
C F+ + H+
Sbjct: 206 D-CGTLFSRRDSFITHR 221
Score = 35.9 bits (79), Expect = 0.031
Identities = 29/116 (25%), Positives = 47/116 (40%), Gaps = 21/116 (18%)
Query: 178 ALAMHVLTHQLSHVCGVCGKLFSRPWLLQGHLRSHT--------------GEKPYGC--A 221
AL+ L VC +C K F R LQ H R H +K Y C A
Sbjct: 87 ALSPKTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRSNKEVIRKKVYVCPEA 146
Query: 222 HC-----GKAFADRSNLRAHMQTHSSDKNFECSRCHKTFALKSYLNKHQESACVRD 272
C +A D + ++ H +K ++C +C K +A++S H ++ ++
Sbjct: 147 SCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDCKAHSKTCGTKE 202
Score = 28.7 bits (61), Expect = 4.7
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 130 KSKYTCSECGKRYATSSNLSRHKQT 154
+ K+ C +C K+YA S+ H +T
Sbjct: 173 EKKWKCDKCSKKYAVQSDCKAHSKT 197
>At1g08290.1 68414.m00915 zinc finger (C2H2 type) protein (WIP3)
identical to WIP3 protein [Arabidopsis thaliana]
gi|18027014|gb|AAL55723; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 337
Score = 40.3 bits (90), Expect = 0.001
Identities = 37/141 (26%), Positives = 55/141 (39%), Gaps = 13/141 (9%)
Query: 132 KYTCSECGKRYATSSNLSRHKQTHRSLDSVAAKRCGECGKAYVSMPALAMHVLTHQLSHV 191
++ CS C K + +N+ H H S R G PA + + + +
Sbjct: 179 QFACSICSKTFNRYNNMQMHMWGHGS-----EFRKGADSLKGTIQPAAILRLPCYCCAEG 233
Query: 192 C-GVCGKLFSRPW----LLQGHLRSHTGEKPYGCAHCGKAFADRSNLRAHMQTHSSDKNF 246
C S+P LQ H + G KP+ C CGKA A + + R H + + K +
Sbjct: 234 CKNNINHPRSKPLKDFRTLQTHYKRKHGSKPFSCGKCGKALAVKGDWRTHEK--NCGKLW 291
Query: 247 ECSRCHKTFALKSYLNKHQES 267
C+ C F K L H S
Sbjct: 292 YCT-CGSDFKHKRSLKDHIRS 311
Score = 35.1 bits (77), Expect = 0.055
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Query: 194 VCGKLFSRPWLLQGHLRSHTGEKPYGCAHCGKAFADRSNLRAHMQTHSSD 243
VCGK F W+ + H G + C+ C K F +N++ HM H S+
Sbjct: 160 VCGKRF---WI-PSPAQIHVGPMQFACSICSKTFNRYNNMQMHMWGHGSE 205
Score = 29.1 bits (62), Expect = 3.6
Identities = 32/128 (25%), Positives = 47/128 (36%), Gaps = 31/128 (24%)
Query: 169 CGKAYVSMPALAMHVLTHQLSHVCGVCGKLFSRPWLLQGHLRSHTGE------------K 216
CGK + +HV Q + C +C K F+R +Q H+ H E +
Sbjct: 161 CGKRFWIPSPAQIHVGPMQFA--CSICSKTFNRYNNMQMHMWGHGSEFRKGADSLKGTIQ 218
Query: 217 P--------YGCAH-C--------GKAFADRSNLRAHMQTHSSDKNFECSRCHKTFALKS 259
P Y CA C K D L+ H + K F C +C K A+K
Sbjct: 219 PAAILRLPCYCCAEGCKNNINHPRSKPLKDFRTLQTHYKRKHGSKPFSCGKCGKALAVKG 278
Query: 260 YLNKHQES 267
H+++
Sbjct: 279 DWRTHEKN 286
>At5g56200.1 68418.m07012 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 493
Score = 39.5 bits (88), Expect = 0.003
Identities = 26/76 (34%), Positives = 33/76 (43%), Gaps = 5/76 (6%)
Query: 166 CGECGKAYVSMPALAMHVLTHQLSHVCGVCGKLFSRPWLLQGHL-RSHTGEKPYGCAHCG 224
C ECGK +VS AL H+ HV RP ++ G + RS G+ C C
Sbjct: 81 CCECGKRFVSGKALG----GHKRIHVLETRKFSMMRPKMVSGMVGRSERGDLEVACCVCY 136
Query: 225 KAFADRSNLRAHMQTH 240
K F L HM+ H
Sbjct: 137 KKFTSMKALYGHMRFH 152
Score = 37.9 bits (84), Expect = 0.008
Identities = 28/106 (26%), Positives = 43/106 (40%), Gaps = 8/106 (7%)
Query: 107 SDGRSKRRSFANAPVECAQQPEPKSKYTCSECGKRYATSSNLSRHKQTHRSLDSVAAKRC 166
+D +K VE ++ + K+ C ECGKR+ + L HK+ H + ++
Sbjct: 55 NDHEAKSMDLEQGDVE--EEEGEEKKHICCECGKRFVSGKALGGHKRIH----VLETRKF 108
Query: 167 GECGKAYVSMPALAMHVLTHQLSHVCGVCGKLFSRPWLLQGHLRSH 212
VS + L C VC K F+ L GH+R H
Sbjct: 109 SMMRPKMVS--GMVGRSERGDLEVACCVCYKKFTSMKALYGHMRFH 152
Score = 37.9 bits (84), Expect = 0.008
Identities = 27/95 (28%), Positives = 41/95 (43%), Gaps = 12/95 (12%)
Query: 130 KSKYTCSECGKRYATSSNLSRHKQTHRS---LDSVAAKRCGECG----KAYVSMPALAMH 182
+ K+ C C K +++ L H+ +H L++ A+ E +A ++ A A
Sbjct: 339 REKHVCVTCNKSFSSYQALGGHRASHNKVKILENHQARANAEASLLGTEAIITGLASAQG 398
Query: 183 VLT-----HQLSHVCGVCGKLFSRPWLLQGHLRSH 212
T H HVC +C K FS L GH R H
Sbjct: 399 TNTSLSSSHNGDHVCNICHKSFSTGQALGGHKRCH 433
Score = 29.5 bits (63), Expect = 2.7
Identities = 29/90 (32%), Positives = 38/90 (42%), Gaps = 15/90 (16%)
Query: 190 HVCGVCGKLFSRPWLLQGHLRSHTGEKPYGCAHCGKAFADRS---------NLRAHMQTH 240
HVC C K FS L GH SH K H +A A+ S L + T+
Sbjct: 342 HVCVTCNKSFSSYQALGGHRASHNKVKILE-NHQARANAEASLLGTEAIITGLASAQGTN 400
Query: 241 ---SSDKNFE--CSRCHKTFALKSYLNKHQ 265
SS N + C+ CHK+F+ L H+
Sbjct: 401 TSLSSSHNGDHVCNICHKSFSTGQALGGHK 430
>At5g03150.1 68418.m00263 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 503
Score = 39.5 bits (88), Expect = 0.003
Identities = 32/137 (23%), Positives = 56/137 (40%), Gaps = 14/137 (10%)
Query: 131 SKYTCSECGKRYATSSNLSRHKQTHRSLDSVAAKRCGEC--GKAYVSMPALAMHVLTHQL 188
+++ C C K + NL H++ H + + E K Y+ +H H
Sbjct: 80 NRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRSKQEVIKKKVYICPIKTCVH---HDA 136
Query: 189 SHVCGVCGKLFSRPWLLQGHLRSHTGEKPYGCAHCGKAFADRSNLRAHMQTHSSDKNFEC 248
S G + + + R H GEK + C C K +A +S+ +AH +T + ++C
Sbjct: 137 SRALG------DLTGIKKHYSRKH-GEKKWKCEKCSKKYAVQSDWKAHAKT-CGTREYKC 188
Query: 249 SRCHKTFALKSYLNKHQ 265
C F+ K H+
Sbjct: 189 D-CGTLFSRKDSFITHR 204
Score = 35.5 bits (78), Expect = 0.041
Identities = 26/103 (25%), Positives = 42/103 (40%), Gaps = 21/103 (20%)
Query: 191 VCGVCGKLFSRPWLLQGHLRSHT--------------GEKPY-----GCAH--CGKAFAD 229
VC +C K F R LQ H R H +K Y C H +A D
Sbjct: 83 VCEICNKGFQRDQNLQLHRRGHNLPWKLKQRSKQEVIKKKVYICPIKTCVHHDASRALGD 142
Query: 230 RSNLRAHMQTHSSDKNFECSRCHKTFALKSYLNKHQESACVRD 272
+ ++ H +K ++C +C K +A++S H ++ R+
Sbjct: 143 LTGIKKHYSRKHGEKKWKCEKCSKKYAVQSDWKAHAKTCGTRE 185
Score = 27.9 bits (59), Expect = 8.3
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 130 KSKYTCSECGKRYATSSNLSRHKQT 154
+ K+ C +C K+YA S+ H +T
Sbjct: 156 EKKWKCEKCSKKYAVQSDWKAHAKT 180
>At3g50700.1 68416.m05547 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 452
Score = 39.5 bits (88), Expect = 0.003
Identities = 35/157 (22%), Positives = 62/157 (39%), Gaps = 13/157 (8%)
Query: 131 SKYTCSECGKRYATSSNLSRHKQTHRSLDSVAAKRCGEC-GKAYVSMPALAMHVLTHQLS 189
+++ C C K + NL H++ H + K E K YV +H H S
Sbjct: 61 NRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQKSNKEVKKKVYVCPEVSCVH---HDPS 117
Query: 190 HVCGVCGKLFSRPWLLQGHLRSHTGEKPYGCAHCGKAFADRSNLRAHMQTHSSDKNFECS 249
G + + R H GEK + C C K +A +S+ +AH + K ++C
Sbjct: 118 RALG------DLTGIKKHFCRKH-GEKKWKCDKCSKKYAVQSDWKAHSKI-CGTKEYKCD 169
Query: 250 RCHKTFALKSYLNKHQESACVRDEDSTQTDPTNSASE 286
C F+ + H+ E++ ++ + S +
Sbjct: 170 -CGTLFSRRDSFITHRAFCDALAEENARSHHSQSKKQ 205
Score = 33.9 bits (74), Expect = 0.13
Identities = 28/109 (25%), Positives = 43/109 (39%), Gaps = 20/109 (18%)
Query: 178 ALAMHVLTHQLSHVCGVCGKLFSRPWLLQGHLRSHT-------------GEKPYGCAH-- 222
AL+ L VC +C K F R LQ H R H +K Y C
Sbjct: 51 ALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQKSNKEVKKKVYVCPEVS 110
Query: 223 C-----GKAFADRSNLRAHMQTHSSDKNFECSRCHKTFALKSYLNKHQE 266
C +A D + ++ H +K ++C +C K +A++S H +
Sbjct: 111 CVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSK 159
>At1g14580.1 68414.m01734 zinc finger (C2H2 type) family protein
similar to zinc finger protein ID1 GB:AAC18941
GI:3170601 from [Zea mays] contains Pfam domain,
PF00096: Zinc finger, C2H2 type
Length = 467
Score = 39.1 bits (87), Expect = 0.003
Identities = 37/155 (23%), Positives = 64/155 (41%), Gaps = 16/155 (10%)
Query: 131 SKYTCSECGKRYATSSNLSRHKQTHRSLDSVAAKRCGEC-GKAYV-SMPALAMHVLTHQL 188
+++ C C K + NL H++ H + K E K Y+ P+ H L
Sbjct: 80 NRFLCEVCNKGFQREQNLQLHRRGHNLPWKLKQKSNKEVRRKVYLCPEPSCVHHDPARAL 139
Query: 189 SHVCGVCGKLFSRPWLLQGHLRSHTGEKPYGCAHCGKAFADRSNLRAHMQTHSSDKNFEC 248
+ G+ + + R H GEK + C C K +A +S+ +AH +T K + C
Sbjct: 140 GDLTGI----------KKHYYRKH-GEKKWKCDKCSKRYAVQSDWKAHSKT-CGTKEYRC 187
Query: 249 SRCHKTFALKSYLNKHQESACVRDEDSTQTDPTNS 283
C F+ + H+ ++S + +PT S
Sbjct: 188 D-CGTIFSRRDSYITHRAFCDALIQESAR-NPTVS 220
Score = 29.5 bits (63), Expect = 2.7
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 130 KSKYTCSECGKRYATSSNLSRHKQT 154
+ K+ C +C KRYA S+ H +T
Sbjct: 155 EKKWKCDKCSKRYAVQSDWKAHSKT 179
>At3g49930.1 68416.m05460 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 215
Score = 38.7 bits (86), Expect = 0.004
Identities = 27/98 (27%), Positives = 38/98 (38%), Gaps = 3/98 (3%)
Query: 186 HQLSHVCGVCGKLFSRPWLLQGHLRSHTGEKPYGCAHCGKAFADRSNLRAHMQTHSSDKN 245
HQ + C VCGK F L GH SH + + N+ ++ S K
Sbjct: 90 HQKDYKCSVCGKSFPSYQALGGHKTSHRKPVSVDVNNSNGTVTNNGNI-SNGLVGQSGKT 148
Query: 246 FECSRCHKTFALKSYLNKHQESACVRDEDSTQTDPTNS 283
CS C K+F L H+ C D + ++ NS
Sbjct: 149 HNCSICFKSFPSGQALGGHKR--CHYDGGNGNSNGDNS 184
Score = 37.5 bits (83), Expect = 0.010
Identities = 25/82 (30%), Positives = 31/82 (37%), Gaps = 6/82 (7%)
Query: 133 YTCSECGKRYATSSNLSRHKQTHRSLDSVAAKRCG--ECGKAYVSMPALAMHVLTHQLSH 190
Y CS CGK + + L HK +HR SV +S + TH
Sbjct: 94 YKCSVCGKSFPSYQALGGHKTSHRKPVSVDVNNSNGTVTNNGNISNGLVGQSGKTHN--- 150
Query: 191 VCGVCGKLFSRPWLLQGHLRSH 212
C +C K F L GH R H
Sbjct: 151 -CSICFKSFPSGQALGGHKRCH 171
>At5g66730.1 68418.m08412 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 500
Score = 38.3 bits (85), Expect = 0.006
Identities = 34/148 (22%), Positives = 59/148 (39%), Gaps = 13/148 (8%)
Query: 131 SKYTCSECGKRYATSSNLSRHKQTHRSLDSVAAKRCGEC-GKAYVSMPALAMHVLTHQLS 189
+++ C C K + NL H++ H + + E K YV + +H H S
Sbjct: 59 NRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSTKEVRKKVYVCPVSGCVH---HDPS 115
Query: 190 HVCGVCGKLFSRPWLLQGHLRSHTGEKPYGCAHCGKAFADRSNLRAHMQTHSSDKNFECS 249
G + + R H GEK + C C K +A +S+ +AH + K ++C
Sbjct: 116 RALG------DLTGIKKHFCRKH-GEKKWKCEKCSKKYAVQSDWKAHSKI-CGTKEYKCD 167
Query: 250 RCHKTFALKSYLNKHQESACVRDEDSTQ 277
C F+ + H+ E+S +
Sbjct: 168 -CGTLFSRRDSFITHRAFCDALAEESAK 194
Score = 36.3 bits (80), Expect = 0.024
Identities = 29/109 (26%), Positives = 44/109 (40%), Gaps = 20/109 (18%)
Query: 178 ALAMHVLTHQLSHVCGVCGKLFSRPWLLQGHLRSHT-------------GEKPY-----G 219
AL+ L VC +C K F R LQ H R H +K Y G
Sbjct: 49 ALSPKTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSTKEVRKKVYVCPVSG 108
Query: 220 CAHC--GKAFADRSNLRAHMQTHSSDKNFECSRCHKTFALKSYLNKHQE 266
C H +A D + ++ H +K ++C +C K +A++S H +
Sbjct: 109 CVHHDPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKKYAVQSDWKAHSK 157
>At3g60580.1 68416.m06777 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 288
Score = 38.3 bits (85), Expect = 0.006
Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 6/83 (7%)
Query: 130 KSKYTCSECGKRYATSSNLSRHKQTHRSLDSVAAKRCGECGKAYVSMPALAMHVLTHQLS 189
K +Y C CGK + + L H+ +H+ K Y ++ +A +
Sbjct: 170 KGRYKCETCGKVFKSYQALGGHRASHKKNRVSNNKTEQRSETEYDNVVVVAKRI------ 223
Query: 190 HVCGVCGKLFSRPWLLQGHLRSH 212
H C +C ++F+ L GH RSH
Sbjct: 224 HECPICLRVFASGQALGGHKRSH 246
>At3g57670.1 68416.m06425 zinc finger (C2H2 type) protein (WIP2)
identical to WIP2 protein [Arabidopsis thaliana]
gi|18027012|gb|AAL55722; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 383
Score = 38.3 bits (85), Expect = 0.006
Identities = 23/60 (38%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Query: 205 LQGHLRSHTGEKPYGCAHCGKAFADRSNLRAHMQTHSSDKNFECSRCHKTFALKSYLNKH 264
LQ H + G KP+ C CGKAFA R + R H + + K + C C F K L H
Sbjct: 288 LQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEK--NCGKLWYCI-CGSDFKHKRSLKDH 344
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/43 (27%), Positives = 20/43 (46%)
Query: 225 KAFADRSNLRAHMQTHSSDKNFECSRCHKTFALKSYLNKHQES 267
K D L+ H + K F C +C K FA++ H+++
Sbjct: 280 KPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKN 322
>At5g67450.1 68418.m08504 zinc finger (C2H2 type) protein 1 (AZF1)
identical to Cys2/His2-type zinc finger protein 1
[Arabidopsis thaliana] gi|6009887|dbj|BAA85108
Length = 245
Score = 37.9 bits (84), Expect = 0.008
Identities = 24/103 (23%), Positives = 44/103 (42%), Gaps = 10/103 (9%)
Query: 120 PVECAQQPEPKSKYTCSECGKRYATSSNLSRHKQTHR--SLDSVAAKRCGECGKAYVSMP 177
P+ P Y C+ CGK +++ L HK +HR + S+ + ++ +
Sbjct: 84 PLPSRASPSDHRDYKCTVCGKSFSSYQALGGHKTSHRKPTNTSITSGNQELSNNSHSNSG 143
Query: 178 ALAMHVLTHQLS--------HVCGVCGKLFSRPWLLQGHLRSH 212
++ ++V + + H C +C K F+ L GH R H
Sbjct: 144 SVVINVTVNTGNGVSQSGKIHTCSICFKSFASGQALGGHKRCH 186
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/52 (25%), Positives = 23/52 (44%)
Query: 211 SHTGEKPYGCAHCGKAFADRSNLRAHMQTHSSDKNFECSRCHKTFALKSYLN 262
S + + Y C CGK+F+ L H +H N + ++ + S+ N
Sbjct: 90 SPSDHRDYKCTVCGKSFSSYQALGGHKTSHRKPTNTSITSGNQELSNNSHSN 141
>At4g35280.1 68417.m05013 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 284
Score = 37.9 bits (84), Expect = 0.008
Identities = 22/84 (26%), Positives = 37/84 (44%), Gaps = 3/84 (3%)
Query: 132 KYTCSECGKRYATSSNLSRHKQTHRSLDSVAAKRCGECGKAYVSMPALAMH---VLTHQL 188
++ C C K + + L H+ +H+++ A VS + H +LT
Sbjct: 161 RFECGGCKKVFGSHQALGGHRASHKNVKGCFAITNVTDDPMTVSTSSGHDHQGKILTFSG 220
Query: 189 SHVCGVCGKLFSRPWLLQGHLRSH 212
H C +C ++FS L GH+R H
Sbjct: 221 HHKCNICFRVFSSGQALGGHMRCH 244
Score = 29.5 bits (63), Expect = 2.7
Identities = 23/92 (25%), Positives = 36/92 (39%), Gaps = 10/92 (10%)
Query: 157 SLDSVAAKRCGECGKAYVSMPALAMHVLTHQLSHVCGVCGKLFSRPWLL--------QGH 208
S S+ CG C K + S AL H +H+ C + P + QG
Sbjct: 155 SSSSIERFECGGCKKVFGSHQALGGHRASHKNVKGCFAITNVTDDPMTVSTSSGHDHQGK 214
Query: 209 LRSHTGEKPYGCAHCGKAFADRSNLRAHMQTH 240
+ + +G + C C + F+ L HM+ H
Sbjct: 215 ILTFSGH--HKCNICFRVFSSGQALGGHMRCH 244
>At1g34790.1 68414.m04337 transparent testa 1 protein (TT1) / zinc
finger (C2H2 type) protein TT1 identical to transparent
testa 1 GI:18253279 from [Arabidopsis thaliana];
contains Pfam profile PF00096: Zinc finger, C2H2 type
Length = 303
Score = 37.9 bits (84), Expect = 0.008
Identities = 33/133 (24%), Positives = 51/133 (38%), Gaps = 6/133 (4%)
Query: 133 YTCSECGKRYATSSNLSRHKQTHRSLDSVAAKRC-GECGKAYVSMPALAMHVLTHQLSHV 191
++C C K + +NL H H S + G +A + +P + +H+
Sbjct: 145 FSCHVCFKTFNRYNNLQMHMWGHGSQYRKGPESLKGTQPRAMLGIPCYCC--VEGCRNHI 202
Query: 192 CGVCGKLFSRPWLLQGHLRSHTGEKPYGCAHCGKAFADRSNLRAHMQTHSSDKNFECSRC 251
K LQ H + G KP+ C CGK A + + R H + + K + C C
Sbjct: 203 DHPRSKPLKDFRTLQTHYKRKHGHKPFSCRLCGKLLAVKGDWRTHEK--NCGKRWVCV-C 259
Query: 252 HKTFALKSYLNKH 264
F K L H
Sbjct: 260 GSDFKHKRSLKDH 272
>At5g60470.1 68418.m07584 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 392
Score = 37.5 bits (83), Expect = 0.010
Identities = 36/150 (24%), Positives = 60/150 (40%), Gaps = 16/150 (10%)
Query: 131 SKYTCSECGKRYATSSNLSRHKQTHRSLDSVAAK--RCGECGKAYVSMPALAMHVLTHQL 188
+++ C C K + NL HK+ H + K + K Y+ +H H
Sbjct: 4 NRFFCEICNKGFQREQNLQLHKRGHNLPWKLKQKTNKNQVKKKVYICPEKSCVH---HDP 60
Query: 189 SHVCG-VCGKLFSRPWLLQGHLRSHTGEKPYGCAHCGKAFADRSNLRAHMQTHSSDKNFE 247
+ G + G ++ H GEK + C C K +A S+ +AH + S + F
Sbjct: 61 ARALGDLTG--------IKKHFSRKHGEKKWKCDKCSKKYAVISDWKAHNKICGS-REFR 111
Query: 248 CSRCHKTFALKSYLNKHQESACVRDEDSTQ 277
C C F+ K H+ V E+S++
Sbjct: 112 CD-CGTLFSRKDSFISHRSFCDVLAEESSK 140
>At3g46070.1 68416.m04985 zinc finger (C2H2 type) family protein
contains zinc finger, C2H2 type, domain, PROSITE:PS00028
Length = 170
Score = 37.5 bits (83), Expect = 0.010
Identities = 22/87 (25%), Positives = 33/87 (37%), Gaps = 7/87 (8%)
Query: 130 KSKYTCSECGKRYATSSNLSRHKQTHRSLDSVAAKRCGECGKAYVSMPALAMHVLTHQLS 189
K + C C + + + L H+ +H L + K+ P T +
Sbjct: 33 KRVFRCKTCERDFDSFQALGGHRASHSKLTN-------SDDKSLPGSPKKKPKTTTTTTA 85
Query: 190 HVCGVCGKLFSRPWLLQGHLRSHTGEK 216
H C +CG F L GH+R H EK
Sbjct: 86 HTCPICGLEFPMGQALGGHMRKHRNEK 112
Score = 28.3 bits (60), Expect = 6.3
Identities = 23/83 (27%), Positives = 34/83 (40%), Gaps = 4/83 (4%)
Query: 165 RCGECGKAYVSMPALAMHVLTHQLSHVCGVCGKLFSRPWLLQGHLRSHTGEKPYGCAHCG 224
RC C + + S AL H +H S + K S P + ++ T + C CG
Sbjct: 37 RCKTCERDFDSFQALGGHRASH--SKLTNSDDK--SLPGSPKKKPKTTTTTTAHTCPICG 92
Query: 225 KAFADRSNLRAHMQTHSSDKNFE 247
F L HM+ H ++K E
Sbjct: 93 LEFPMGQALGGHMRKHRNEKERE 115
>At2g17180.1 68415.m01984 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 270
Score = 37.1 bits (82), Expect = 0.014
Identities = 26/102 (25%), Positives = 42/102 (41%), Gaps = 7/102 (6%)
Query: 117 ANAPVECAQQPEPKSKYTCSECGKRYATSSNLSRHKQTHRSLDSVAA-KRCGECG----- 170
AN V + E + ++ C C K + + L H+ TH+ + A K E
Sbjct: 133 ANGDVP-TRSSEVEERFECDGCKKVFGSHQALGGHRATHKDVKGCFANKNITEDPPPPPP 191
Query: 171 KAYVSMPALAMHVLTHQLSHVCGVCGKLFSRPWLLQGHLRSH 212
+ V L ++H C +C ++FS L GH+R H
Sbjct: 192 QEIVDQDKGKSVKLVSGMNHRCNICSRVFSSGQALGGHMRCH 233
Score = 32.7 bits (71), Expect = 0.29
Identities = 41/165 (24%), Positives = 64/165 (38%), Gaps = 13/165 (7%)
Query: 125 QQPEPK-SKYTCSECGKRYATSSNLSRHKQ-THRSLD-SVAAKRCGECGKAYVSMPALAM 181
Q P K +K T +E G +SS+ R K T D S A+ C ECGK + S+ AL
Sbjct: 27 QNPRRKRTKLTNNEVG----SSSSSPRPKPVTQPDPDASQIARPCTECGKQFGSLKALFG 82
Query: 182 HVLTHQLSHVCGVCGKLFSRPWLLQGHLRSHTGEKPYGCAH-CGKAFADRSNLRAHMQTH 240
H+ H G+ + + S + P H +N ++
Sbjct: 83 HMRCHPERQWRGINPPSNFKRRINSNAASSSSSWDPSEEEHNIASCLLMMANGDVPTRSS 142
Query: 241 SSDKNFECSRCHKTFALKSYLNKHQES-----ACVRDEDSTQTDP 280
++ FEC C K F L H+ + C +++ T+ P
Sbjct: 143 EVEERFECDGCKKVFGSHQALGGHRATHKDVKGCFANKNITEDPP 187
>At3g46090.1 68416.m04987 zinc finger (C2H2 type) family protein
(ZAT7) identical to zinc finger protein ZAT7
[Arabidopsis thaliana] gi|1418341|emb|CAA67234; contains
Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 168
Score = 35.5 bits (78), Expect = 0.041
Identities = 28/116 (24%), Positives = 46/116 (39%), Gaps = 12/116 (10%)
Query: 133 YTCSECGKRYATSSNLSRHKQTHRSLDSVAAKRCGECGKAYVSMPALAMHVLTHQLSHVC 192
+ C C K +++ L H+ +H+ L S+ + T + SH C
Sbjct: 40 FRCKTCLKEFSSFQALGGHRASHKKL----------INSDNPSLLGSLSNKKT-KTSHPC 88
Query: 193 GVCGKLFSRPWLLQGHLRSHTGEKPYGCAHCGKAFADRSNLRAHMQTHSSDKNFEC 248
+CG F L GH+R H EK G + ++F + ++ SS K C
Sbjct: 89 PICGVKFPMGQALGGHMRRHRNEKVSG-SLVTRSFLPETTTVTALKKFSSGKRVAC 143
>At2g28710.1 68415.m03490 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 156
Score = 35.5 bits (78), Expect = 0.041
Identities = 28/92 (30%), Positives = 40/92 (43%), Gaps = 14/92 (15%)
Query: 124 AQQPEPKSK-YTCSECGKRYATSSNLSRHKQTHRSLDSVAAKRCGECGKAYVSMPALAMH 182
A Q + KS+ + C C K + + L H+ +HR S A + G A P
Sbjct: 24 AHQNDTKSRVFACKTCNKEFPSFQALGGHRASHRR--SAALE-----GHA----PPSPKR 72
Query: 183 VLTHQLSHVCGVCGKLFSRPWLLQGHLRSHTG 214
V + H C +CG F+ L GH+R H G
Sbjct: 73 V--KPVKHECPICGAEFAVGQALGGHMRKHRG 102
>At3g45260.1 68416.m04887 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 446
Score = 35.1 bits (77), Expect = 0.055
Identities = 33/150 (22%), Positives = 57/150 (38%), Gaps = 16/150 (10%)
Query: 131 SKYTCSECGKRYATSSNLSRHKQTHRSLDSVAAKRCGEC--GKAYVSMPALAMHVLTHQL 188
+++ C C K + NL H++ H + + E K Y+ +H H
Sbjct: 66 NRFICEVCNKGFKRDQNLQLHRRGHNLPWKLKQRTNKEQVKKKVYICPEKTCVH---HDP 122
Query: 189 SHVCG-VCGKLFSRPWLLQGHLRSHTGEKPYGCAHCGKAFADRSNLRAHMQTHSSDKNFE 247
+ G + G ++ H GEK + C C K +A S+ +AH + K +
Sbjct: 123 ARALGDLTG--------IKKHFSRKHGEKKWKCDKCSKKYAVMSDWKAHSKI-CGTKEYR 173
Query: 248 CSRCHKTFALKSYLNKHQESACVRDEDSTQ 277
C C F+ K H+ E+S +
Sbjct: 174 CD-CGTLFSRKDSFITHRAFCDALAEESAR 202
>At2g45120.1 68415.m05615 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 314
Score = 35.1 bits (77), Expect = 0.055
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Query: 218 YGCAHCGKAFADRSNLRAHMQTHSSDKNFECSRCHKTFALKSYLNKHQESACVRDEDSTQ 277
Y C C K+F + L HM++H + E RC T + + + C D+D T+
Sbjct: 4 YKCRFCFKSFINGRALGGHMRSHMLTLSAE--RCVITGEAEEEVEERPSQLC-DDDDDTE 60
Query: 278 TDPTNSASE 286
+D ++S+ E
Sbjct: 61 SDASSSSGE 69
Score = 33.9 bits (74), Expect = 0.13
Identities = 20/83 (24%), Positives = 38/83 (45%), Gaps = 8/83 (9%)
Query: 130 KSKYTCSECGKRYATSSNLSRHKQTHRSLDSVAAKRCGECGKAYVSMPALAMHVLTHQLS 189
+ ++ C CGK + + L H+ +H+ + + + YV + V ++
Sbjct: 191 RGRFKCETCGKVFKSYQALGGHRASHKK-NKACMTKTEQVETEYV------LGVKEKKV- 242
Query: 190 HVCGVCGKLFSRPWLLQGHLRSH 212
H C +C ++F+ L GH RSH
Sbjct: 243 HECPICFRVFTSGQALGGHKRSH 265
>At1g26610.1 68414.m03241 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 455
Score = 35.1 bits (77), Expect = 0.055
Identities = 16/47 (34%), Positives = 22/47 (46%)
Query: 140 KRYATSSNLSRHKQTHRSLDSVAAKRCGECGKAYVSMPALAMHVLTH 186
KR+ + KQ + +RC ECGK +VS AL H+ H
Sbjct: 69 KRFVDHRQIMALKQQQQQQQLQELRRCRECGKGFVSSKALCGHMACH 115
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/52 (26%), Positives = 19/52 (36%)
Query: 220 CAHCGKAFADRSNLRAHMQTHSSDKNFECSRCHKTFALKSYLNKHQESACVR 271
C CGK F L HM HS + T A S + + + V+
Sbjct: 95 CRECGKGFVSSKALCGHMACHSEREKIVMDSQSDTEASSSPIRRRSKRVVVK 146
>At1g49900.1 68414.m05596 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 917
Score = 34.7 bits (76), Expect = 0.072
Identities = 26/85 (30%), Positives = 36/85 (42%), Gaps = 10/85 (11%)
Query: 129 PKS-KYTCSECGKRYATSSNLSRHKQTHRSLDSVAAKRCGECGKAYVSMPALAMHVLTHQ 187
PKS Y C+ CG+ + L HK +HR+ V GE + P+ +
Sbjct: 745 PKSDSYQCNVCGRELPSYQALGGHKASHRTKPPV-ENATGEKMRPKKLAPSGKI------ 797
Query: 188 LSHVCGVCGKLFSRPWLLQGHLRSH 212
H C +C + FS L GH R H
Sbjct: 798 --HKCSICHREFSTGQSLGGHKRLH 820
Score = 32.7 bits (71), Expect = 0.29
Identities = 26/89 (29%), Positives = 36/89 (40%), Gaps = 6/89 (6%)
Query: 125 QQPEPKSK-YTCSECGKRYATSSNLSRHKQTHRSLDSVAAKRCGECGKAYVSMPALAMHV 183
Q PKS + CS C K + + L HK +H S+ A + G M
Sbjct: 184 QTAPPKSDLFKCSICEKVFTSYQALGGHKASH----SIKAAQLENAGADAGEKTRSKMLS 239
Query: 184 LTHQLSHVCGVCGKLFSRPWLLQGHLRSH 212
+ ++ H C +C LF L GH R H
Sbjct: 240 PSGKI-HKCDICHVLFPTGQALGGHKRRH 267
Score = 31.9 bits (69), Expect = 0.51
Identities = 21/74 (28%), Positives = 27/74 (36%), Gaps = 4/74 (5%)
Query: 192 CGVCGKLFSRPWLLQGHLRSHTGEKPYGCAHCGKAFADRSNLRAHMQTHSSDKNFECSRC 251
C +C K+F+ L GH SH+ A A AD S K +C C
Sbjct: 195 CSICEKVFTSYQALGGHKASHS----IKAAQLENAGADAGEKTRSKMLSPSGKIHKCDIC 250
Query: 252 HKTFALKSYLNKHQ 265
H F L H+
Sbjct: 251 HVLFPTGQALGGHK 264
Score = 29.9 bits (64), Expect = 2.0
Identities = 22/77 (28%), Positives = 32/77 (41%), Gaps = 8/77 (10%)
Query: 189 SHVCGVCGKLFSRPWLLQGHLRSHTGEKPYGCAHCGKAFADRSNLRAHMQTHSSDKNFEC 248
S+ C VCG+ L GH SH + P A G+ + + S K +C
Sbjct: 749 SYQCNVCGRELPSYQALGGHKASHRTKPPVENA-TGEKMRPK-------KLAPSGKIHKC 800
Query: 249 SRCHKTFALKSYLNKHQ 265
S CH+ F+ L H+
Sbjct: 801 SICHREFSTGQSLGGHK 817
>At5g61470.1 68418.m07713 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 304
Score = 33.5 bits (73), Expect = 0.17
Identities = 23/83 (27%), Positives = 36/83 (43%), Gaps = 11/83 (13%)
Query: 130 KSKYTCSECGKRYATSSNLSRHKQTHRSLDSVAAKRCGECGKAYVSMPALAMHVLTHQLS 189
+SKYTC CGK + L H+ +H+ KR K Y ++ Q
Sbjct: 225 QSKYTCDTCGKVLRSYQALGGHRTSHK------YKRLKISDKNYFGEDG---PIVRRQ-- 273
Query: 190 HVCGVCGKLFSRPWLLQGHLRSH 212
+ C +C ++F+ L GH + H
Sbjct: 274 YECQICNRMFASGQALGGHKKIH 296
Score = 30.3 bits (65), Expect = 1.6
Identities = 12/23 (52%), Positives = 15/23 (65%)
Query: 191 VCGVCGKLFSRPWLLQGHLRSHT 213
+C VC K FS L GH+R+HT
Sbjct: 10 ICQVCKKSFSNGKALGGHMRAHT 32
>At5g59820.1 68418.m07500 zinc finger (C2H2 type) family protein
(ZAT12) identical to zinc finger protein ZAT12
[Arabidopsis thaliana] gi|1418325|emb|CAA67232
Length = 162
Score = 33.1 bits (72), Expect = 0.22
Identities = 24/88 (27%), Positives = 36/88 (40%), Gaps = 14/88 (15%)
Query: 128 EPKSKYTCSECGKRYATSSNLSRHKQTHRSLDSVAAKRCGECGKAYVSMPALAMHVLTHQ 187
+ K +TC C K++ + L H+ +H+ ++ A L V T
Sbjct: 34 DQKRVFTCKTCLKQFHSFQALGGHRASHKKPNNDALSS------------GLMKKVKTS- 80
Query: 188 LSHVCGVCGKLFSRPWLLQGHLRSHTGE 215
SH C +CG F L GH+R H E
Sbjct: 81 -SHPCPICGVEFPMGQALGGHMRRHRNE 107
>At5g04390.1 68418.m00431 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 362
Score = 32.7 bits (71), Expect = 0.29
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 190 HVCGVCGKLFSRPWLLQGHLRSHTG 214
H CG+CG F+ L GH+R H G
Sbjct: 229 HECGICGAEFTSGQALGGHMRRHRG 253
>At3g10470.1 68416.m01255 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 398
Score = 32.7 bits (71), Expect = 0.29
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 190 HVCGVCGKLFSRPWLLQGHLRSHTG 214
H CG+CG F+ L GH+R H G
Sbjct: 261 HECGICGAEFTSGQALGGHMRRHRG 285
>At5g01860.1 68418.m00105 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 215
Score = 31.5 bits (68), Expect = 0.67
Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 122 ECAQQPEPKSK-YTCSECGKRYATSSNLSRHKQTHRSLDSVAAKR 165
E + + E K++ + C+ C K ++TS L H+ H+ S+A +R
Sbjct: 55 ESSTRNEAKARVFACTFCKKEFSTSQALGGHQNAHKQERSLAKRR 99
>At5g22890.1 68418.m02677 zinc finger (C2H2 type) family protein
contains Pfam domain PF00096: Zinc finger, C2H2 type
Length = 373
Score = 31.1 bits (67), Expect = 0.89
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 184 LTHQLSHVCGVCGKLFSRPWLLQGHLRSHTGE 215
L + +H C +CGK F R L+ H+R+H E
Sbjct: 211 LLAKYTHYCQICGKGFKRDANLRMHMRAHGDE 242
Score = 30.3 bits (65), Expect = 1.6
Identities = 11/24 (45%), Positives = 14/24 (58%)
Query: 220 CAHCGKAFADRSNLRAHMQTHSSD 243
C CGK F +NLR HM+ H +
Sbjct: 219 CQICGKGFKRDANLRMHMRAHGDE 242
>At2g42410.1 68415.m05249 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 214
Score = 31.1 bits (67), Expect = 0.89
Identities = 16/51 (31%), Positives = 20/51 (39%), Gaps = 2/51 (3%)
Query: 108 DGRSKRRSFAN--APVECAQQPEPKSKYTCSECGKRYATSSNLSRHKQTHR 156
DG R N E P P YTCS C + + ++ L H HR
Sbjct: 22 DGNGDNRVIMNHYKNYEAGLIPWPPKNYTCSFCRREFRSAQALGGHMNVHR 72
>At2g18490.1 68415.m02155 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 251
Score = 31.1 bits (67), Expect = 0.89
Identities = 19/68 (27%), Positives = 28/68 (41%), Gaps = 5/68 (7%)
Query: 217 PYGCAHCGKAFADRSNLRAHMQTH-SSDKNFECSRCHKTFALKSY----LNKHQESACVR 271
PY C C F AHM +H S+ N E ++ + + Y L + ES ++
Sbjct: 168 PYTCPKCNSIFDTSQKFAAHMSSHYKSETNKERAQRFRARNKRKYRKLNLEVYGESQKIK 227
Query: 272 DEDSTQTD 279
ED D
Sbjct: 228 QEDGVHND 235
>At4g04404.1 68417.m00636 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 230
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/60 (23%), Positives = 28/60 (46%)
Query: 106 VSDGRSKRRSFANAPVECAQQPEPKSKYTCSECGKRYATSSNLSRHKQTHRSLDSVAAKR 165
VS+ ++ + + V + + KS + C CGK + L H++ HR + A++
Sbjct: 64 VSNSGMEKSTTCSDVVALRSKLQSKSSHRCQICGKSFECYQALGGHRRLHRPIKGKLARK 123
Score = 28.3 bits (60), Expect = 6.3
Identities = 13/29 (44%), Positives = 15/29 (51%)
Query: 184 LTHQLSHVCGVCGKLFSRPWLLQGHLRSH 212
L + SH C +CGK F L GH R H
Sbjct: 85 LQSKSSHRCQICGKSFECYQALGGHRRLH 113
>At1g34370.2 68414.m04268 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 499
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 233 LRAHMQTHSSDKNFECSRCH-KTFALKSYLNKHQE 266
++ H + DK+F CSRCH K F++ + L H++
Sbjct: 320 VKNHYKRTHCDKSFTCSRCHTKKFSVIADLKTHEK 354
Score = 30.3 bits (65), Expect = 1.6
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 189 SHVCGVCGKLFSRPWLLQGHLRSHTGE 215
+H C +CGK F R L+ H+R H E
Sbjct: 243 THFCTICGKGFKRDANLRMHMRGHGDE 269
Score = 29.9 bits (64), Expect = 2.0
Identities = 11/24 (45%), Positives = 14/24 (58%)
Query: 220 CAHCGKAFADRSNLRAHMQTHSSD 243
C CGK F +NLR HM+ H +
Sbjct: 246 CTICGKGFKRDANLRMHMRGHGDE 269
>At1g34370.1 68414.m04267 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 499
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 233 LRAHMQTHSSDKNFECSRCH-KTFALKSYLNKHQE 266
++ H + DK+F CSRCH K F++ + L H++
Sbjct: 320 VKNHYKRTHCDKSFTCSRCHTKKFSVIADLKTHEK 354
Score = 30.3 bits (65), Expect = 1.6
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 189 SHVCGVCGKLFSRPWLLQGHLRSHTGE 215
+H C +CGK F R L+ H+R H E
Sbjct: 243 THFCTICGKGFKRDANLRMHMRGHGDE 269
Score = 29.9 bits (64), Expect = 2.0
Identities = 11/24 (45%), Positives = 14/24 (58%)
Query: 220 CAHCGKAFADRSNLRAHMQTHSSD 243
C CGK F +NLR HM+ H +
Sbjct: 246 CTICGKGFKRDANLRMHMRGHGDE 269
>At1g10480.1 68414.m01180 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 211
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/58 (29%), Positives = 25/58 (43%), Gaps = 2/58 (3%)
Query: 211 SHTGEKPYGCAHCGKAFADRSNLRAHMQTHSSD--KNFECSRCHKTFALKSYLNKHQE 266
S T K + C +CGK FA+ L H H + K + ++ YL HQ+
Sbjct: 53 SLTVMKRHECQYCGKEFANSQALGGHQNAHKKERLKKKRLQLQARRASIGYYLTNHQQ 110
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/33 (39%), Positives = 16/33 (48%)
Query: 184 LTHQLSHVCGVCGKLFSRPWLLQGHLRSHTGEK 216
LT H C CGK F+ L GH +H E+
Sbjct: 54 LTVMKRHECQYCGKEFANSQALGGHQNAHKKER 86
>At4g15180.1 68417.m02328 SET domain-containing protein contains
Pfam profile PF00856: SET domain
Length = 2326
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 218 YGCAHCGKAFAD--RSNLRAHMQTHSSDKNFECSRCHKTFALKSYLNKHQESA 268
YG + C K D RS H HS+++ + S K +L+ Y KHQ+++
Sbjct: 359 YGSSKCRKLSDDCSRSLHSDHYSQHSAERLYRDSYPSKNSSLEKYPRKHQDAS 411
>At5g06070.1 68418.m00673 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 226
Score = 29.9 bits (64), Expect = 2.0
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 129 PKSKYTCSECGKRYATSSNLSRHKQTHR 156
P Y+CS CG+ + ++ L H HR
Sbjct: 51 PPRSYSCSFCGREFKSAQALGGHMNVHR 78
Score = 29.9 bits (64), Expect = 2.0
Identities = 10/29 (34%), Positives = 14/29 (48%)
Query: 216 KPYGCAHCGKAFADRSNLRAHMQTHSSDK 244
+ Y C+ CG+ F L HM H D+
Sbjct: 53 RSYSCSFCGREFKSAQALGGHMNVHRRDR 81
>At5g03510.1 68418.m00307 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 292
Score = 29.9 bits (64), Expect = 2.0
Identities = 18/58 (31%), Positives = 23/58 (39%)
Query: 189 SHVCGVCGKLFSRPWLLQGHLRSHTGEKPYGCAHCGKAFADRSNLRAHMQTHSSDKNF 246
+H C +C FS L GH+R H G A A S+ H + KNF
Sbjct: 191 THECSICKAEFSSGQALGGHMRRHRGLTINANATSAIKTAISSSSHHHHEESIRPKNF 248
>At2g37430.1 68415.m04590 zinc finger (C2H2 type) family protein
(ZAT11) contains Pfam domain, PF00096: Zinc finger, C2H2
type
Length = 178
Score = 29.9 bits (64), Expect = 2.0
Identities = 25/102 (24%), Positives = 40/102 (39%), Gaps = 11/102 (10%)
Query: 148 LSRHKQTHRSLDSVAAKRCGECGKAYVSMPALAMHVLTHQLSHVCGVCGKLFSRPWLLQG 207
L++H ++H S C C K + S AL H +H+ KL ++
Sbjct: 35 LNQHTESHTSNQF----ECKTCNKRFSSFQALGGHRASHKKP-------KLTVEQKDVKH 83
Query: 208 HLRSHTGEKPYGCAHCGKAFADRSNLRAHMQTHSSDKNFECS 249
+ G + C+ C ++F L HM+ H S E S
Sbjct: 84 LSNDYKGNHFHKCSICSQSFGTGQALGGHMRRHRSSMTVEPS 125
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Query: 233 LRAHMQTHSSDKNFECSRCHKTFALKSYLNKHQES 267
L H ++H+S++ FEC C+K F+ L H+ S
Sbjct: 35 LNQHTESHTSNQ-FECKTCNKRFSSFQALGGHRAS 68
>At1g02030.1 68414.m00123 zinc finger (C2H2 type) family protein
identical to C2H2 zinc finger protein ZAT1 [Arabidopsis
thaliana] gi|1418321|emb|CAA67227; contains Pfam domain,
PF00096: Zinc finger, C2H2 type
Length = 267
Score = 29.9 bits (64), Expect = 2.0
Identities = 19/80 (23%), Positives = 31/80 (38%), Gaps = 8/80 (10%)
Query: 133 YTCSECGKRYATSSNLSRHKQTHRSLDSVAAKRCGECGKAYVSMPALAMHVLTHQLSHVC 192
+ C C K + + L H+ +H+ + G + + H H C
Sbjct: 160 FECETCEKVFKSYQALGGHRASHKK-KIAETDQLGSDELKKKKKKSTSSH-------HEC 211
Query: 193 GVCGKLFSRPWLLQGHLRSH 212
+C K+F+ L GH RSH
Sbjct: 212 PICAKVFTSGQALGGHKRSH 231
Score = 28.3 bits (60), Expect = 6.3
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 190 HVCGVCGKLFSRPWLLQGHLRSH 212
H C +C K F+ L GH+RSH
Sbjct: 5 HKCKLCWKSFANGRALGGHMRSH 27
Score = 27.9 bits (59), Expect = 8.3
Identities = 11/37 (29%), Positives = 19/37 (51%)
Query: 131 SKYTCSECGKRYATSSNLSRHKQTHRSLDSVAAKRCG 167
S + C C K + + L HK++H S ++ +R G
Sbjct: 207 SHHECPICAKVFTSGQALGGHKRSHASANNEFTRRSG 243
>At5g27880.1 68418.m03344 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 278
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 6/56 (10%)
Query: 107 SDGRSKRRSFANAPVECAQQ-----PEPKSK-YTCSECGKRYATSSNLSRHKQTHR 156
S+ R + SF ++ V ++ P +K YTC C K ++TS L H+ H+
Sbjct: 48 SERRIENSSFGSSAVRRGREIMKFYPSKSNKIYTCHFCKKGFSTSQALGGHQNAHK 103
>At2g37740.1 68415.m04629 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 304
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/50 (30%), Positives = 21/50 (42%)
Query: 107 SDGRSKRRSFANAPVECAQQPEPKSKYTCSECGKRYATSSNLSRHKQTHR 156
S+ S A A + A P YTCS C + + ++ L H HR
Sbjct: 13 SNKESSWEELAFAEDDAAGSLWPPRSYTCSFCRREFKSAQALGGHMNVHR 62
Score = 27.9 bits (59), Expect = 8.3
Identities = 22/93 (23%), Positives = 35/93 (37%), Gaps = 2/93 (2%)
Query: 189 SHVCGVCGKLFSRPWLLQGHLRSHTGEKPYGCAHCGKAFADRSNLRAHMQTHSSDKNFEC 248
S+ C C + F L GH+ H ++ + +S+ +H N
Sbjct: 38 SYTCSFCRREFKSAQALGGHMNVHRRDRARLKQADDQYLFPKSSSSPEYPSHKDSDNIHE 97
Query: 249 SRCHK-TFALKSYLNKHQESACVRDEDSTQTDP 280
+ C+ F K K Q S CV D S+ + P
Sbjct: 98 TSCYTLVFNTKPNYFKTQHS-CVIDLSSSSSLP 129
>At3g53820.1 68416.m05946 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 142
Score = 29.1 bits (62), Expect = 3.6
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 216 KPYGCAHCGKAFADRSNLRAHMQTHSSDK 244
+PY C C + F++ L HM H D+
Sbjct: 19 RPYICEFCERGFSNAQALGGHMNIHRKDR 47
>At3g01460.1 68416.m00070 PHD finger family protein / methyl-CpG
binding domain-containing protein contains Pfam profiles
PF00628: PHD-finger (2 copies), PF01429: Methyl-CpG
binding domain
Length = 2176
Score = 29.1 bits (62), Expect = 3.6
Identities = 11/23 (47%), Positives = 12/23 (52%)
Query: 248 CSRCHKTFALKSYLNKHQESACV 270
C CHKTFA H ES C+
Sbjct: 1806 CLICHKTFASDDEFEDHTESKCI 1828
>At1g30970.1 68414.m03792 zinc finger (C2H2 type) family protein
contains Pfam domain PF00096: Zinc finger, C2H2 type
Length = 367
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 5/58 (8%)
Query: 207 GHLRSHTGEKPYGCAHCGKAFADRSNLRAHMQTHSSDKNFECSRCHKTFALKSYLNKH 264
G + EK + C +C + F D L H + K+F+C CHK + S + H
Sbjct: 2 GKKKKRATEKVW-CYYCDREFDDEKILVQHQKA----KHFKCHVCHKKLSTASGMVIH 54
>At5g56280.1 68418.m07024 COP9 signalosome subunit 6 / CSN subunit 6
(CSN6A) identical to CSN complex subunit 6A [Arabidopsis
thaliana] GI:18056665, COP9 complex subunit 6
[Arabidopsis thaliana] GI:15809663; contains Pfam
profile PF01398: Mov34/MPN/PAD-1 family; identical to
cDNA CSN complex subunit 6A (CSN6A) GI:18056664
Length = 317
Score = 28.7 bits (61), Expect = 4.7
Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 6/57 (10%)
Query: 5 STGTL-LSLPPKKKDIYRP-----YCLGDRAAHPDRPEEDLNAARAILDLSQHAVYL 55
ST TL S KK+++Y+ Y LG + D E D++ +A++D+++ VY+
Sbjct: 84 STQTLDRSFLEKKQELYKKVFPDFYILGWYSTGSDAEESDMHIHKALMDINESPVYV 140
>At5g54360.1 68418.m06769 zinc finger (C2H2 type) family
protein-related contains Prosite:PS00028: Zinc finger,
C2H2 type, domain.
Length = 270
Score = 28.7 bits (61), Expect = 4.7
Identities = 10/31 (32%), Positives = 18/31 (58%)
Query: 186 HQLSHVCGVCGKLFSRPWLLQGHLRSHTGEK 216
+++SH C C + F + L GH++ H E+
Sbjct: 77 NKISHTCRFCKRNFKSCFALGGHMKCHKKER 107
>At2g28200.1 68415.m03424 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 284
Score = 28.7 bits (61), Expect = 4.7
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 190 HVCGVCGKLFSRPWLLQGHLRSH 212
H C +CG F+ L GH+R H
Sbjct: 188 HECSICGSEFTSGQALGGHMRRH 210
>At2g23740.1 68415.m02834 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 907
Score = 28.7 bits (61), Expect = 4.7
Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 7/59 (11%)
Query: 192 CGVCGKLFSRPWLLQGHL--RSHT--GEKPY--GCAHCGKAFADRSNLRAHMQ-THSSD 243
C +C F R LL+ H+ R H EK C CG F D+ L H+Q H S+
Sbjct: 498 CAICLDSFVRRKLLEIHVEERHHVQFAEKCMLLQCIPCGSHFGDKEQLLVHVQAVHPSE 556
>At3g23130.1 68416.m02915 superman protein (SUP) / zinc finger (C2H2
type) family protein identical to superman protein
GB:S60325 from [Arabidopsis thaliana]; contains Pfam
domain, PF00096: Zinc finger, C2H2 type
Length = 204
Score = 28.3 bits (60), Expect = 6.3
Identities = 10/28 (35%), Positives = 14/28 (50%)
Query: 129 PKSKYTCSECGKRYATSSNLSRHKQTHR 156
P YTCS C + + ++ L H HR
Sbjct: 43 PPRSYTCSFCKREFRSAQALGGHMNVHR 70
>At1g68360.1 68414.m07808 zinc finger protein-related similar to
zinc finger protein GI:790683 from [Arabidopsis
thaliana]
Length = 244
Score = 28.3 bits (60), Expect = 6.3
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 214 GEKPYGCAHCGKAFADRSNLRAHMQTHSSDK 244
GE+ Y C +C + F + L H H ++
Sbjct: 69 GERKYECQYCCREFGNSQALGGHQNAHKKER 99
>At1g55050.1 68414.m06288 expressed protein ; expression supported
by MPSS
Length = 914
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 120 PVECAQQPEPKSKYTCSECGKRYATSSNLSRHKQTHR-SLDSVAAKR 165
P+ AQQ EP Y+ E G + SS + +++R LD + + +
Sbjct: 684 PISLAQQQEPNGLYSSKEQGAFHEHSSTEQQQDESNRLCLDKICSSK 730
>At1g15940.1 68414.m01913 expressed protein similar To
androgen-induced prostate proliferative shutoff
associated protein (GI:4559410) [Homo sapiens]
Length = 990
Score = 28.3 bits (60), Expect = 6.3
Identities = 20/91 (21%), Positives = 44/91 (48%), Gaps = 2/91 (2%)
Query: 89 SAERPRETIAYTYDAFFVSDGRSKRRSFANAPVECAQQPEPKSKYTCSECGKRYATSSNL 148
S ++ + + T + F+ +SK+R + VE + PE +S + K+ + + ++
Sbjct: 630 SEDKEDDLLESTPLSAFIQREKSKKRKIVSKNVEPSSSPEVRSSMQTMK--KKDSVTDSI 687
Query: 149 SRHKQTHRSLDSVAAKRCGECGKAYVSMPAL 179
+ K+T +L +V+ + GK S+ L
Sbjct: 688 KQTKRTKGALKAVSNEPESTTGKNLKSLKKL 718
>At5g52010.1 68418.m06454 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 396
Score = 27.9 bits (59), Expect = 8.3
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Query: 98 AYTYDAFFVSDGRSKRRSFANAPVECAQQPEPKSKYTCSECGKRYATSSNLSRH-KQTH 155
A+ + +V + R +RR+ +E + P Y C CG++ T+ +L +H KQ H
Sbjct: 119 AFIHLPHWVVEERRERRNLDF--MERKGEVTPIDPYICGVCGRKCKTNLDLKKHFKQLH 175
>At4g35700.1 68417.m05067 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 275
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Query: 184 LTH--QLSHVCGVCGKLFSRPWLLQGHLRSH 212
LTH Q +C VCGK F+ + GHLR H
Sbjct: 134 LTHLPQGPPMCNVCGKGFASWKAVFGHLRQH 164
>At4g16610.1 68417.m02512 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 204
Score = 27.9 bits (59), Expect = 8.3
Identities = 11/26 (42%), Positives = 14/26 (53%)
Query: 187 QLSHVCGVCGKLFSRPWLLQGHLRSH 212
Q H C +C K F L GH++SH
Sbjct: 2 QNKHKCKLCSKSFCNGRALGGHMKSH 27
>At3g42690.1 68416.m04439 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At2g11345, At4g04130
Length = 1009
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/44 (31%), Positives = 21/44 (47%)
Query: 148 LSRHKQTHRSLDSVAAKRCGECGKAYVSMPALAMHVLTHQLSHV 191
LS H ++ A G C KAYV+ + +H+ + L HV
Sbjct: 826 LSTHNDDFMKCENKANYDWGSCVKAYVTGKSTGIHMKSEFLKHV 869
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.129 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,392,261
Number of Sequences: 28952
Number of extensions: 240319
Number of successful extensions: 1078
Number of sequences better than 10.0: 79
Number of HSP's better than 10.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 653
Number of HSP's gapped (non-prelim): 317
length of query: 286
length of database: 12,070,560
effective HSP length: 80
effective length of query: 206
effective length of database: 9,754,400
effective search space: 2009406400
effective search space used: 2009406400
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 59 (27.9 bits)
- SilkBase 1999-2023 -