Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000605-TA|BGIBMGA000605-PA|IPR007087|Zinc finger,
C2H2-type
(95 letters)
Database: mosquito
2123 sequences; 516,269 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY939827-1|AAY18208.1| 680|Anopheles gambiae CTCF-like protein ... 64 8e-13
AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific tran... 31 0.010
AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcript... 27 0.16
CR954257-11|CAJ14162.1| 415|Anopheles gambiae predicted protein... 25 0.48
DQ230894-1|ABD94313.1| 315|Anopheles gambiae zinc finger protei... 23 1.5
DQ230893-1|ABD94311.1| 315|Anopheles gambiae zinc finger protei... 23 1.5
DQ182017-1|ABA56309.1| 383|Anopheles gambiae G(alpha)s protein. 23 1.5
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein. 23 1.9
AY745220-1|AAU93487.1| 101|Anopheles gambiae cytochrome P450 pr... 21 7.8
>AY939827-1|AAY18208.1| 680|Anopheles gambiae CTCF-like protein
protein.
Length = 680
Score = 64.1 bits (149), Expect = 8e-13
Identities = 27/81 (33%), Positives = 39/81 (48%)
Query: 5 THRMGHICGVCGKHFSRPWLLRGHVRSHTGEKPYNCASCGKSFADRSNLRAHLQTHSSDK 64
TH H C C L+ H+R+HTGEKP+ C C + D+ L H++ H+ +K
Sbjct: 207 THERPHKCTECDYASVELSKLKRHIRTHTGEKPFQCPHCTYASPDKFKLTRHMRIHTGEK 266
Query: 65 KYECSRCHKSFALKSYLNKHQ 85
Y C C F + L H+
Sbjct: 267 PYSCDVCFARFTQSNSLKAHK 287
Score = 57.6 bits (133), Expect = 7e-11
Identities = 20/75 (26%), Positives = 40/75 (53%)
Query: 10 HICGVCGKHFSRPWLLRGHVRSHTGEKPYNCASCGKSFADRSNLRAHLQTHSSDKKYECS 69
++C C ++ +LL H+++H+ ++P+ C C + F ++L+ H+ TH+ K + C
Sbjct: 127 YMCNYCNYTSNKLFLLSRHLKTHSEDRPHKCVVCERGFKTLASLQNHVNTHTGTKPHRCK 186
Query: 70 RCHKSFALKSYLNKH 84
C F L +H
Sbjct: 187 HCDNCFTTSGELIRH 201
Score = 56.4 bits (130), Expect = 2e-10
Identities = 28/86 (32%), Positives = 43/86 (50%), Gaps = 3/86 (3%)
Query: 2 HVLTHR--MGHICGVCGKHFSRPWLLRGHVR-SHTGEKPYNCASCGKSFADRSNLRAHLQ 58
HV TH H C C F+ L H+R HT E+P+ C C + + S L+ H++
Sbjct: 173 HVNTHTGTKPHRCKHCDNCFTTSGELIRHIRYRHTHERPHKCTECDYASVELSKLKRHIR 232
Query: 59 THSSDKKYECSRCHKSFALKSYLNKH 84
TH+ +K ++C C + K L +H
Sbjct: 233 THTGEKPFQCPHCTYASPDKFKLTRH 258
Score = 56.4 bits (130), Expect = 2e-10
Identities = 23/73 (31%), Positives = 36/73 (49%)
Query: 12 CGVCGKHFSRPWLLRGHVRSHTGEKPYNCASCGKSFADRSNLRAHLQTHSSDKKYECSRC 71
C C F + + H ++H GEK Y C C + +L +HL H+ K Y+C +C
Sbjct: 329 CKRCDSTFPDRYSYKMHAKTHEGEKCYRCEYCPYASISMRHLESHLLLHTDQKPYKCDQC 388
Query: 72 HKSFALKSYLNKH 84
++F K L +H
Sbjct: 389 AQTFRQKQLLKRH 401
Score = 56.0 bits (129), Expect = 2e-10
Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 3/86 (3%)
Query: 2 HVLTHRMG--HICGVCGKHFSRPWLLRGHVRSHTGEKPYNCASCGKSFADRSNLRAHLQ- 58
H+ TH H C VC + F L+ HV +HTG KP+ C C F L H++
Sbjct: 145 HLKTHSEDRPHKCVVCERGFKTLASLQNHVNTHTGTKPHRCKHCDNCFTTSGELIRHIRY 204
Query: 59 THSSDKKYECSRCHKSFALKSYLNKH 84
H+ ++ ++C+ C + S L +H
Sbjct: 205 RHTHERPHKCTECDYASVELSKLKRH 230
Score = 56.0 bits (129), Expect = 2e-10
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 5/88 (5%)
Query: 2 HVLTHRMGHI----CGVCGKHFSRPWLLRGHVRS-HTGEKPYNCASCGKSFADRSNLRAH 56
H + H++G+ C +C R LR HV++ HT +KP C C +F DR + + H
Sbjct: 286 HKMIHQVGNKPVFQCKLCPTTCGRKTDLRIHVQNLHTADKPIKCKRCDSTFPDRYSYKMH 345
Query: 57 LQTHSSDKKYECSRCHKSFALKSYLNKH 84
+TH +K Y C C + +L H
Sbjct: 346 AKTHEGEKCYRCEYCPYASISMRHLESH 373
Score = 50.0 bits (114), Expect = 1e-08
Identities = 28/87 (32%), Positives = 39/87 (44%), Gaps = 4/87 (4%)
Query: 2 HVLTH--RMGHICGVCGKHFSRPWLLRGHVRSHTGEKPYNCASCGKSFADRSNLRAHLQT 59
H+ TH C C + L H+R HTGEKPY+C C F ++L+AH
Sbjct: 230 HIRTHTGEKPFQCPHCTYASPDKFKLTRHMRIHTGEKPYSCDVCFARFTQSNSLKAHKMI 289
Query: 60 HSSDKK--YECSRCHKSFALKSYLNKH 84
H K ++C C + K+ L H
Sbjct: 290 HQVGNKPVFQCKLCPTTCGRKTDLRIH 316
Score = 41.1 bits (92), Expect = 7e-06
Identities = 27/95 (28%), Positives = 39/95 (41%), Gaps = 11/95 (11%)
Query: 1 MHVLTHR--MGHICGVCGKHFSRPWLLRGHVRSHTGEKPYNCASCGKSFADRSNLRAHLQ 58
MH TH + C C L H+ HT +KPY C C ++F + L+ H+
Sbjct: 344 MHAKTHEGEKCYRCEYCPYASISMRHLESHLLLHTDQKPYKCDQCAQTFRQKQLLKRHMN 403
Query: 59 -THSSD--------KKYECSRCHKSFALKSYLNKH 84
H+ D K + C C + F K L +H
Sbjct: 404 YYHNPDYVAPTPKAKTHICPTCKRPFRHKGNLIRH 438
Score = 35.5 bits (78), Expect = 3e-04
Identities = 17/59 (28%), Positives = 25/59 (42%)
Query: 26 RGHVRSHTGEKPYNCASCGKSFADRSNLRAHLQTHSSDKKYECSRCHKSFALKSYLNKH 84
RG + Y C C + L HL+THS D+ ++C C + F + L H
Sbjct: 115 RGKRTQQSTGSTYMCNYCNYTSNKLFLLSRHLKTHSEDRPHKCVVCERGFKTLASLQNH 173
>AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific
transcription factor FRU-MA protein.
Length = 960
Score = 30.7 bits (66), Expect = 0.010
Identities = 15/45 (33%), Positives = 20/45 (44%), Gaps = 4/45 (8%)
Query: 12 CGVCGKHFSRPWLLRGHVRSHTGEKPYNCASCGKSFADRSNLRAH 56
C C K S W H H + + C CG+ F R N++AH
Sbjct: 901 CVSCHKTVSNRW---HHANIHRPQS-HECPVCGQKFTRRDNMKAH 941
Score = 27.9 bits (59), Expect = 0.068
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 6/54 (11%)
Query: 33 TGEKP--YNCASCGKSFADRSNLRAHLQTHSSDKKYECSRCHKSFALKSYLNKH 84
TG P Y+C SC K+ ++R + H H + +EC C + F + + H
Sbjct: 892 TGTFPTLYSCVSCHKTVSNRWH---HANIH-RPQSHECPVCGQKFTRRDNMKAH 941
Score = 25.4 bits (53), Expect = 0.36
Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Query: 2 HVLTHR-MGHICGVCGKHFSRPWLLRGHVR 30
H HR H C VCG+ F+R ++ H +
Sbjct: 914 HANIHRPQSHECPVCGQKFTRRDNMKAHCK 943
>AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcriptase
protein.
Length = 988
Score = 26.6 bits (56), Expect = 0.16
Identities = 21/77 (27%), Positives = 32/77 (41%), Gaps = 11/77 (14%)
Query: 24 LLRGH--VRSHTGEKPY-----NCASCGKSFADRSNLRAHLQTHSSDKKYECSRCHKSFA 76
LL GH +RS+ EK NC CG + D ++ H + RCH
Sbjct: 915 LLTGHGFLRSYFVEKGILEGSPNCPECGDAVEDVEHVLFHCPRSDRIRNEMQQRCHSRVT 974
Query: 77 LKSYLNKHQEAACVRSD 93
+ + +++ C RSD
Sbjct: 975 MDNIVSE----MCARSD 987
>CR954257-11|CAJ14162.1| 415|Anopheles gambiae predicted protein
protein.
Length = 415
Score = 25.0 bits (52), Expect = 0.48
Identities = 18/73 (24%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
Query: 20 SRPWLLRGHVRSHTGE-KPYNCASCGKSFADRSNLRAH-LQTHS-SDKKY--ECSRCHKS 74
S+P G + T E + + C C S+ + + H + H S++ + +C+ CHK
Sbjct: 330 SQPARTGGSAVTITSEGQRFQCNLCDMSYRTKLQYQKHEYEVHRISNENFGIKCTICHKL 389
Query: 75 FALKSYLNKHQEA 87
F+ + H A
Sbjct: 390 FSQRQDYQLHMRA 402
Score = 23.0 bits (47), Expect = 1.9
Identities = 8/24 (33%), Positives = 11/24 (45%)
Query: 33 TGEKPYNCASCGKSFADRSNLRAH 56
T Y C +CG F + +N H
Sbjct: 287 TNHHLYRCPACGNLFVELTNFYNH 310
>DQ230894-1|ABD94313.1| 315|Anopheles gambiae zinc finger protein
183 protein.
Length = 315
Score = 23.4 bits (48), Expect = 1.5
Identities = 18/61 (29%), Positives = 23/61 (37%), Gaps = 12/61 (19%)
Query: 29 VRSHTGEKPYNCASCGKSFADRSNLRAHLQTHSSDKKYECSRCHKSFALKSYLNKHQEAA 88
+ S E P+ C C +SF D + K Y C RC AL Y + A
Sbjct: 236 IHSDDEELPFKCYVCRESFVDPIVTKC--------KHYFCERC----ALAQYKKSSRCAI 283
Query: 89 C 89
C
Sbjct: 284 C 284
>DQ230893-1|ABD94311.1| 315|Anopheles gambiae zinc finger protein
183 protein.
Length = 315
Score = 23.4 bits (48), Expect = 1.5
Identities = 18/61 (29%), Positives = 23/61 (37%), Gaps = 12/61 (19%)
Query: 29 VRSHTGEKPYNCASCGKSFADRSNLRAHLQTHSSDKKYECSRCHKSFALKSYLNKHQEAA 88
+ S E P+ C C +SF D + K Y C RC AL Y + A
Sbjct: 236 IHSDDEELPFKCYVCRESFVDPIVTKC--------KHYFCERC----ALAQYKKSSRCAI 283
Query: 89 C 89
C
Sbjct: 284 C 284
>DQ182017-1|ABA56309.1| 383|Anopheles gambiae G(alpha)s protein.
Length = 383
Score = 23.4 bits (48), Expect = 1.5
Identities = 10/34 (29%), Positives = 14/34 (41%)
Query: 17 KHFSRPWLLRGHVRSHTGEKPYNCASCGKSFADR 50
+H W RG +++ Y C K F DR
Sbjct: 137 EHTEELWKDRGVQQTYERSNEYQLIDCAKYFLDR 170
>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
Length = 1229
Score = 23.0 bits (47), Expect = 1.9
Identities = 9/16 (56%), Positives = 10/16 (62%)
Query: 38 YNCASCGKSFADRSNL 53
YNC + GK F SNL
Sbjct: 1113 YNCVAPGKRFQPMSNL 1128
>AY745220-1|AAU93487.1| 101|Anopheles gambiae cytochrome P450
protein.
Length = 101
Score = 21.0 bits (42), Expect = 7.8
Identities = 6/12 (50%), Positives = 9/12 (75%)
Query: 23 WLLRGHVRSHTG 34
WL RG ++ H+G
Sbjct: 24 WLKRGELKEHSG 35
Database: mosquito
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 516,269
Number of sequences in database: 2123
Lambda K H
0.323 0.132 0.443
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,813
Number of Sequences: 2123
Number of extensions: 4288
Number of successful extensions: 33
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 10
Number of HSP's gapped (non-prelim): 21
length of query: 95
length of database: 516,269
effective HSP length: 54
effective length of query: 41
effective length of database: 401,627
effective search space: 16466707
effective search space used: 16466707
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 42 (21.0 bits)
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