Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000605-TA|BGIBMGA000605-PA|IPR007087|Zinc finger,
C2H2-type
(95 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 84 3e-19
L01589-1|AAA27736.1| 81|Apis mellifera zinc finger protein pro... 77 5e-17
L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein pro... 71 2e-15
L01587-1|AAA27734.1| 69|Apis mellifera zinc finger protein pro... 52 1e-09
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 34 3e-04
AB208107-1|BAE72139.1| 71|Apis mellifera Broad complex zinc fi... 32 0.001
AB208108-1|BAE72140.1| 92|Apis mellifera Broad complex zinc fi... 31 0.002
AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc fi... 27 0.030
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 25 0.16
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 19 7.9
AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein... 19 7.9
AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein... 19 7.9
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 83.8 bits (198), Expect = 3e-19
Identities = 38/87 (43%), Positives = 47/87 (54%)
Query: 1 MHVLTHRMGHICGVCGKHFSRPWLLRGHVRSHTGEKPYNCASCGKSFADRSNLRAHLQTH 60
M + T H C VC K F + L H+R+HTGEKPY C +CGK F L+ H +TH
Sbjct: 167 MRIHTGERPHKCTVCSKTFIQSGQLVIHMRTHTGEKPYVCKACGKGFTCSKQLKVHTRTH 226
Query: 61 SSDKKYECSRCHKSFALKSYLNKHQEA 87
+ +K Y C C KSF L HQ A
Sbjct: 227 TGEKPYTCDICGKSFGYNHVLKLHQVA 253
Score = 81.0 bits (191), Expect = 2e-18
Identities = 31/73 (42%), Positives = 45/73 (61%)
Query: 12 CGVCGKHFSRPWLLRGHVRSHTGEKPYNCASCGKSFADRSNLRAHLQTHSSDKKYECSRC 71
C +CGK F+ P L H R+HTGEKPY C C KSF+ + NL H + H+ ++ Y+C C
Sbjct: 94 CNICGKTFAVPARLTRHYRTHTGEKPYQCEYCSKSFSVKENLSVHRRIHTKERPYKCDVC 153
Query: 72 HKSFALKSYLNKH 84
++F L++H
Sbjct: 154 ERAFEHSGKLHRH 166
Score = 81.0 bits (191), Expect = 2e-18
Identities = 35/86 (40%), Positives = 49/86 (56%), Gaps = 2/86 (2%)
Query: 1 MHVLTH--RMGHICGVCGKHFSRPWLLRGHVRSHTGEKPYNCASCGKSFADRSNLRAHLQ 58
+H+ TH ++C CGK F+ L+ H R+HTGEKPY C CGKSF L+ H
Sbjct: 193 IHMRTHTGEKPYVCKACGKGFTCSKQLKVHTRTHTGEKPYTCDICGKSFGYNHVLKLHQV 252
Query: 59 THSSDKKYECSRCHKSFALKSYLNKH 84
H +K Y+C+ CH++F K + H
Sbjct: 253 AHYGEKVYKCTLCHETFGSKKTMELH 278
Score = 74.9 bits (176), Expect = 2e-16
Identities = 33/76 (43%), Positives = 47/76 (61%), Gaps = 2/76 (2%)
Query: 12 CGVCGKHFSRPWLLRGHVRSH--TGEKPYNCASCGKSFADRSNLRAHLQTHSSDKKYECS 69
C +C K F + L + H+RSH GE PY C CGK+FA + L H +TH+ +K Y+C
Sbjct: 64 CLLCQKAFDQKNLYQSHLRSHGKEGEDPYRCNICGKTFAVPARLTRHYRTHTGEKPYQCE 123
Query: 70 RCHKSFALKSYLNKHQ 85
C KSF++K L+ H+
Sbjct: 124 YCSKSFSVKENLSVHR 139
Score = 70.5 bits (165), Expect = 3e-15
Identities = 28/73 (38%), Positives = 37/73 (50%)
Query: 12 CGVCGKHFSRPWLLRGHVRSHTGEKPYNCASCGKSFADRSNLRAHLQTHSSDKKYECSRC 71
C VC + F L H+R HTGE+P+ C C K+F L H++TH+ +K Y C C
Sbjct: 150 CDVCERAFEHSGKLHRHMRIHTGERPHKCTVCSKTFIQSGQLVIHMRTHTGEKPYVCKAC 209
Query: 72 HKSFALKSYLNKH 84
K F L H
Sbjct: 210 GKGFTCSKQLKVH 222
Score = 58.4 bits (135), Expect = 1e-11
Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Query: 2 HVLTH--RMGHICGVCGKHFSRPWLLRGHVRSHTGEKPYNCASCGKSFADRSNLRAHLQT 59
H TH + C C K FS L H R HT E+PY C C ++F L H++
Sbjct: 110 HYRTHTGEKPYQCEYCSKSFSVKENLSVHRRIHTKERPYKCDVCERAFEHSGKLHRHMRI 169
Query: 60 HSSDKKYECSRCHKSFALKSYLNKH 84
H+ ++ ++C+ C K+F L H
Sbjct: 170 HTGERPHKCTVCSKTFIQSGQLVIH 194
Score = 53.2 bits (122), Expect = 5e-10
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 1 MHVLTH--RMGHICGVCGKHFSRPWLLRGHVRSHTGEKPYNCASCGKSFADRSNLRAHLQ 58
+H TH + C +CGK F +L+ H +H GEK Y C C ++F + + H++
Sbjct: 221 VHTRTHTGEKPYTCDICGKSFGYNHVLKLHQVAHYGEKVYKCTLCHETFGSKKTMELHIK 280
Query: 59 THS 61
THS
Sbjct: 281 THS 283
Score = 44.4 bits (100), Expect = 2e-07
Identities = 18/52 (34%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
Query: 35 EKPYNCASCGKSFADRSNLRAHLQTHSSDKK--YECSRCHKSFALKSYLNKH 84
EK Y C C K+F ++ ++HL++H + + Y C+ C K+FA+ + L +H
Sbjct: 59 EKTYQCLLCQKAFDQKNLYQSHLRSHGKEGEDPYRCNICGKTFAVPARLTRH 110
Score = 25.4 bits (53), Expect = 0.12
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 59 THSSDKKYECSRCHKSFALKSYLNKH 84
T+ +K Y+C C K+F K+ H
Sbjct: 55 TNIEEKTYQCLLCQKAFDQKNLYQSH 80
>L01589-1|AAA27736.1| 81|Apis mellifera zinc finger protein
protein.
Length = 81
Score = 76.6 bits (180), Expect = 5e-17
Identities = 28/48 (58%), Positives = 38/48 (79%)
Query: 1 MHVLTHRMGHICGVCGKHFSRPWLLRGHVRSHTGEKPYNCASCGKSFA 48
MH+ TH + C +CGK FSRPWLL+GH+R+HTGEKP++C C ++FA
Sbjct: 34 MHIRTHTLPCKCHLCGKAFSRPWLLQGHIRTHTGEKPFSCQHCNRAFA 81
Score = 54.8 bits (126), Expect = 2e-10
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 12 CGVCGKHFSRPWLLRGHVRSHTGEKPYNCASCGKSFADRSNLRAHLQTHSSDKKYECSRC 71
C C K + L+ H+R+HT P C CGK+F+ L+ H++TH+ +K + C C
Sbjct: 19 CKYCEKVYVSLGALKMHIRTHT--LPCKCHLCGKAFSRPWLLQGHIRTHTGEKPFSCQHC 76
Query: 72 HKSFA 76
+++FA
Sbjct: 77 NRAFA 81
Score = 31.9 bits (69), Expect = 0.001
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Query: 35 EKPYNCASCGKSFADRSNLRAHLQTHSSDKKYECSRCHKSFALKSYLNKH 84
+K ++C C K + L+ H++TH+ K C C K+F+ L H
Sbjct: 14 KKSFSCKYCEKVYVSLGALKMHIRTHTLPCK--CHLCGKAFSRPWLLQGH 61
>L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein
protein.
Length = 74
Score = 71.3 bits (167), Expect = 2e-15
Identities = 27/60 (45%), Positives = 38/60 (63%)
Query: 12 CGVCGKHFSRPWLLRGHVRSHTGEKPYNCASCGKSFADRSNLRAHLQTHSSDKKYECSRC 71
C C K F+R L+ H+R HTGEKPY+C+ C + F +NLR HL+ H+ ++ Y C C
Sbjct: 12 CPECHKRFTRDHHLKTHMRLHTGEKPYHCSHCDRQFVQVANLRRHLRVHTGERPYACELC 71
Score = 61.3 bits (142), Expect = 2e-12
Identities = 22/55 (40%), Positives = 33/55 (60%)
Query: 30 RSHTGEKPYNCASCGKSFADRSNLRAHLQTHSSDKKYECSRCHKSFALKSYLNKH 84
R+HTGEKP+ C C K F +L+ H++ H+ +K Y CS C + F + L +H
Sbjct: 2 RTHTGEKPFECPECHKRFTRDHHLKTHMRLHTGEKPYHCSHCDRQFVQVANLRRH 56
Score = 39.1 bits (87), Expect = 9e-06
Identities = 17/43 (39%), Positives = 23/43 (53%)
Query: 1 MHVLTHRMGHICGVCGKHFSRPWLLRGHVRSHTGEKPYNCASC 43
M + T + C C + F + LR H+R HTGE+PY C C
Sbjct: 29 MRLHTGEKPYHCSHCDRQFVQVANLRRHLRVHTGERPYACELC 71
>L01587-1|AAA27734.1| 69|Apis mellifera zinc finger protein
protein.
Length = 69
Score = 52.0 bits (119), Expect = 1e-09
Identities = 19/47 (40%), Positives = 30/47 (63%)
Query: 25 LRGHVRSHTGEKPYNCASCGKSFADRSNLRAHLQTHSSDKKYECSRC 71
L H+R+H G KP+ C C S ++S L +HL++HS+ +Y C+ C
Sbjct: 4 LEYHLRNHFGSKPFKCEKCSYSCVNKSMLNSHLKSHSNVYQYRCANC 50
Score = 33.5 bits (73), Expect = 5e-04
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 50 RSNLRAHLQTHSSDKKYECSRCHKSFALKSYLNKH 84
+ +L HL+ H K ++C +C S KS LN H
Sbjct: 1 KHHLEYHLRNHFGSKPFKCEKCSYSCVNKSMLNSH 35
Score = 31.9 bits (69), Expect = 0.001
Identities = 14/50 (28%), Positives = 24/50 (48%)
Query: 12 CGVCGKHFSRPWLLRGHVRSHTGEKPYNCASCGKSFADRSNLRAHLQTHS 61
C C +L H++SH+ Y CA+C + +L+ HL+ +S
Sbjct: 19 CEKCSYSCVNKSMLNSHLKSHSNVYQYRCANCTYATKYCHSLKLHLRKYS 68
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 34.3 bits (75), Expect = 3e-04
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Query: 38 YNCASCGKSFADRSNLRAHL-QTHSSD-KKYECSRCHKSFALKSYLNKHQ 85
Y C CGK+ + + L+ H Q H C+ CHK F + LN H+
Sbjct: 372 YTCDVCGKTLSTKLTLKRHKEQQHFQPLNSAVCALCHKVFRTLNSLNNHK 421
Score = 28.7 bits (61), Expect = 0.013
Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 4/59 (6%)
Query: 10 HICGVCGKHFSRPWLLRGHVRSHTGEKPYN---CASCGKSFADRSNLRAHLQTHSSDKK 65
+ C VCGK S L+ H + +P N CA C K F ++L H + +K
Sbjct: 372 YTCDVCGKTLSTKLTLKRH-KEQQHFQPLNSAVCALCHKVFRTLNSLNNHKSIYHRRQK 429
Score = 22.6 bits (46), Expect = 0.85
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 66 YECSRCHKSFALKSYLNKHQE 86
Y C C K+ + K L +H+E
Sbjct: 372 YTCDVCGKTLSTKLTLKRHKE 392
>AB208107-1|BAE72139.1| 71|Apis mellifera Broad complex zinc
finger domain-Z2 isoform protein.
Length = 71
Score = 31.9 bits (69), Expect = 0.001
Identities = 12/54 (22%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Query: 33 TGEKPYNCASCGKSFADRSNLRAHLQTHSSDK--KYECSRCHKSFALKSYLNKH 84
+ +K + C CGK +++L+ H+ +++ +Y C C + + ++ L H
Sbjct: 1 SAKKLFTCQLCGKVLCSKASLKRHVADKHAERQEEYRCVICERVYCSRNSLMTH 54
>AB208108-1|BAE72140.1| 92|Apis mellifera Broad complex zinc
finger domain-Z3 isoform protein.
Length = 92
Score = 31.1 bits (67), Expect = 0.002
Identities = 18/78 (23%), Positives = 32/78 (41%), Gaps = 2/78 (2%)
Query: 12 CGVCGKHFSRPWLLRGHVRS--HTGEKPYNCASCGKSFADRSNLRAHLQTHSSDKKYECS 69
C C ++FS + L+ H + + Y C C + + +++L H
Sbjct: 8 CPYCRRNFSCYYSLKRHFQDKHEQSDTLYVCEFCNRRYRTKNSLTTHKSLQHRGSSGMLK 67
Query: 70 RCHKSFALKSYLNKHQEA 87
R K+ A+K+ L Q A
Sbjct: 68 RLLKTTAIKNVLGSMQHA 85
Score = 19.8 bits (39), Expect = 6.0
Identities = 8/27 (29%), Positives = 14/27 (51%)
Query: 67 ECSRCHKSFALKSYLNKHQEAACVRSD 93
EC C ++F+ L +H + +SD
Sbjct: 7 ECPYCRRNFSCYYSLKRHFQDKHEQSD 33
>AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc
finger domain-Z1 isoform protein.
Length = 111
Score = 27.5 bits (58), Expect = 0.030
Identities = 13/50 (26%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Query: 38 YNCASCGKSFADRSNLRAHLQ-THSSDKKYE-CSRCHKSFALKSYLNKHQ 85
+ C C K + LR H+Q H+ K C+ C + ++ + L H+
Sbjct: 3 FRCEPCNKILTSLTRLRRHIQNVHTRPSKEPICNICKRVYSSLNSLRNHK 52
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 25.0 bits (52), Expect = 0.16
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 57 LQTHSSDKKYECS--RCHKSFALKSYLNKHQEAACVRSDD 94
L+ +S K+Y CS R KS+ ++ K++E + RS D
Sbjct: 263 LEERTSRKRYSCSREREQKSYKNENSYRKYRETSKERSRD 302
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 19.4 bits (38), Expect = 7.9
Identities = 8/19 (42%), Positives = 9/19 (47%)
Query: 35 EKPYNCASCGKSFADRSNL 53
E P NCA G + NL
Sbjct: 313 EPPKNCADSGSIWETGKNL 331
>AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 19.4 bits (38), Expect = 7.9
Identities = 5/11 (45%), Positives = 7/11 (63%)
Query: 10 HICGVCGKHFS 20
H+C +CG S
Sbjct: 108 HLCSICGDRAS 118
>AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 19.4 bits (38), Expect = 7.9
Identities = 5/11 (45%), Positives = 7/11 (63%)
Query: 10 HICGVCGKHFS 20
H+C +CG S
Sbjct: 108 HLCSICGDRAS 118
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.323 0.132 0.443
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,679
Number of Sequences: 429
Number of extensions: 1248
Number of successful extensions: 36
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of query: 95
length of database: 140,377
effective HSP length: 49
effective length of query: 46
effective length of database: 119,356
effective search space: 5490376
effective search space used: 5490376
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.6 bits)
S2: 38 (19.4 bits)
- SilkBase 1999-2023 -