Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000605-TA|BGIBMGA000605-PA|IPR007087|Zinc finger,
C2H2-type
(95 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g06634.1 68417.m01050 zinc finger (C2H2 type) family protein ... 57 2e-09
At1g72050.2 68414.m08328 zinc finger (C2H2 type) family protein ... 53 3e-08
At5g04240.1 68418.m00414 zinc finger (C2H2 type) family protein ... 41 1e-04
At1g27730.1 68414.m03389 zinc finger (C2H2 type) family protein ... 41 1e-04
At3g49930.1 68416.m05460 zinc finger (C2H2 type) family protein ... 40 2e-04
At1g72050.1 68414.m08329 zinc finger (C2H2 type) family protein ... 40 2e-04
At1g68130.1 68414.m07782 zinc finger (C2H2 type) family protein ... 40 2e-04
At1g51220.1 68414.m05761 zinc finger (C2H2 type) protein (WIP5) ... 40 2e-04
At1g25250.1 68414.m03133 zinc finger (C2H2 type) family protein ... 40 2e-04
At3g48430.1 68416.m05287 zinc finger (C2H2 type) family protein ... 40 3e-04
At3g50700.1 68416.m05547 zinc finger (C2H2 type) family protein ... 38 8e-04
At3g20880.1 68416.m02640 zinc finger (C2H2 type) protein (WIP4) ... 38 8e-04
At3g57670.1 68416.m06425 zinc finger (C2H2 type) protein (WIP2) ... 38 0.001
At2g01940.1 68415.m00129 zinc finger (C2H2 type) family protein ... 38 0.001
At5g66730.1 68418.m08412 zinc finger (C2H2 type) family protein ... 38 0.001
At1g08290.1 68414.m00915 zinc finger (C2H2 type) protein (WIP3) ... 38 0.001
At1g03840.1 68414.m00365 zinc finger (C2H2 type) family protein ... 38 0.001
At3g29340.1 68416.m03684 zinc finger (C2H2 type) family protein ... 37 0.002
At1g26590.1 68414.m03239 zinc finger (C2H2 type) family protein ... 37 0.002
At5g44160.1 68418.m05404 zinc finger (C2H2 type) family protein ... 37 0.002
At5g04340.1 68418.m00426 zinc finger (C2H2 type) family protein ... 37 0.002
At3g46080.1 68416.m04986 zinc finger (C2H2 type) family protein ... 37 0.002
At3g13810.1 68416.m01744 zinc finger (C2H2 type) family protein ... 37 0.002
At2g02070.1 68415.m00143 zinc finger (C2H2 type) family protein ... 37 0.002
At1g55110.1 68414.m06294 zinc finger (C2H2 type) family protein ... 37 0.002
At1g34790.1 68414.m04337 transparent testa 1 protein (TT1) / zin... 37 0.002
At1g14580.1 68414.m01734 zinc finger (C2H2 type) family protein ... 36 0.003
At3g46070.1 68416.m04985 zinc finger (C2H2 type) family protein ... 36 0.004
At2g02080.1 68415.m00144 zinc finger (C2H2 type) family protein ... 36 0.004
At5g43170.1 68418.m05269 zinc finger (C2H2 type) protein 3 (AZF3... 35 0.009
At3g46090.1 68416.m04987 zinc finger (C2H2 type) family protein ... 35 0.009
At5g03150.1 68418.m00263 zinc finger (C2H2 type) family protein ... 34 0.012
At3g45260.1 68416.m04887 zinc finger (C2H2 type) family protein ... 34 0.012
At5g60470.1 68418.m07584 zinc finger (C2H2 type) family protein ... 33 0.022
At2g23740.1 68415.m02834 zinc finger (C2H2 type) family protein ... 33 0.022
At5g04390.1 68418.m00431 zinc finger (C2H2 type) family protein ... 33 0.029
At3g19580.1 68416.m02483 zinc finger (C2H2 type) protein 2 (AZF2... 33 0.029
At3g10470.1 68416.m01255 zinc finger (C2H2 type) family protein ... 33 0.029
At1g49900.1 68414.m05596 zinc finger (C2H2 type) family protein ... 33 0.029
At5g67450.1 68418.m08504 zinc finger (C2H2 type) protein 1 (AZF1... 33 0.038
At4g02670.1 68417.m00362 zinc finger (C2H2 type) family protein ... 33 0.038
At5g22890.1 68418.m02677 zinc finger (C2H2 type) family protein ... 32 0.050
At1g34370.2 68414.m04268 zinc finger (C2H2 type) family protein ... 32 0.050
At1g34370.1 68414.m04267 zinc finger (C2H2 type) family protein ... 32 0.050
At5g56200.1 68418.m07012 zinc finger (C2H2 type) family protein ... 32 0.066
At1g10480.1 68414.m01180 zinc finger (C2H2 type) family protein ... 32 0.066
At4g15180.1 68417.m02328 SET domain-containing protein contains ... 31 0.088
At5g61470.1 68418.m07713 zinc finger (C2H2 type) family protein ... 31 0.15
At3g56250.1 68416.m06251 expressed protein 30 0.20
At5g27880.1 68418.m03344 zinc finger (C2H2 type) family protein ... 30 0.27
At2g17180.1 68415.m01984 zinc finger (C2H2 type) family protein ... 30 0.27
At2g37430.1 68415.m04590 zinc finger (C2H2 type) family protein ... 29 0.35
At2g28710.1 68415.m03490 zinc finger (C2H2 type) family protein ... 29 0.35
At5g06070.1 68418.m00673 zinc finger (C2H2 type) family protein ... 29 0.47
At2g28200.1 68415.m03424 zinc finger (C2H2 type) family protein ... 29 0.47
At1g67030.1 68414.m07622 zinc finger (C2H2 type) family protein ... 29 0.47
At5g03510.1 68418.m00307 zinc finger (C2H2 type) family protein ... 29 0.62
At5g59820.1 68418.m07500 zinc finger (C2H2 type) family protein ... 28 0.82
At4g35280.1 68417.m05013 zinc finger (C2H2 type) family protein ... 28 0.82
At3g60580.1 68416.m06777 zinc finger (C2H2 type) family protein ... 28 0.82
At2g26940.1 68415.m03231 zinc finger (C2H2 type) family protein ... 28 0.82
At5g54360.1 68418.m06769 zinc finger (C2H2 type) family protein-... 28 1.1
At3g23140.1 68416.m02916 zinc finger (C2H2 type) family protein ... 28 1.1
At1g02030.1 68414.m00123 zinc finger (C2H2 type) family protein ... 28 1.1
At4g35700.1 68417.m05067 zinc finger (C2H2 type) family protein ... 27 1.4
At4g04404.1 68417.m00636 zinc finger (C2H2 type) family protein ... 27 1.4
At1g68360.1 68414.m07808 zinc finger protein-related similar to ... 27 1.4
At5g44150.1 68418.m05403 expressed protein 27 1.9
At4g25610.1 68417.m03689 zinc finger (C2H2 type) family protein ... 27 1.9
At4g22410.1 68417.m03238 ubiquitin carboxyl-terminal hydrolase f... 27 1.9
At4g22350.1 68417.m03231 ubiquitin carboxyl-terminal hydrolase f... 27 1.9
At4g22290.1 68417.m03224 ubiquitin carboxyl-terminal hydrolase f... 27 1.9
At1g26610.1 68414.m03241 zinc finger (C2H2 type) family protein ... 27 1.9
At5g63280.1 68418.m07942 zinc finger (C2H2 type) family protein ... 27 2.5
At5g42640.1 68418.m05191 zinc finger (C2H2 type) family protein ... 27 2.5
At5g25560.1 68418.m03041 zinc finger (C3HC4-type RING finger) fa... 27 2.5
At4g16610.1 68417.m02512 zinc finger (C2H2 type) family protein ... 27 2.5
At1g13290.1 68414.m01543 zinc finger (C2H2 type) family protein ... 27 2.5
At5g22920.1 68418.m02680 zinc finger (C3HC4-type RING finger) fa... 26 3.3
At3g48030.1 68416.m05236 hypoxia-responsive family protein / zin... 26 3.3
At3g01460.1 68416.m00070 PHD finger family protein / methyl-CpG ... 26 3.3
At5g40710.1 68418.m04941 zinc finger (C2H2 type) family protein ... 26 4.3
At3g58070.1 68416.m06473 zinc finger (C2H2 type) family protein ... 26 4.3
At2g41940.1 68415.m05188 zinc finger (C2H2 type) family protein ... 26 4.3
At2g21850.1 68415.m02596 DC1 domain-containing protein contains ... 26 4.3
At2g15740.1 68415.m01802 zinc finger (C2H2 type) family protein ... 26 4.3
At5g06650.1 68418.m00751 zinc finger (C2H2 type) family protein ... 25 5.7
At3g01030.1 68416.m00004 zinc finger (C2H2 type) family protein ... 25 5.7
At2g45120.1 68415.m05615 zinc finger (C2H2 type) family protein ... 25 5.7
At2g18490.1 68415.m02155 zinc finger (C2H2 type) family protein ... 25 5.7
At1g77300.1 68414.m09002 SET domain-containing protein similar t... 25 5.7
At1g65920.1 68414.m07480 regulator of chromosome condensation (R... 25 5.7
At1g30970.1 68414.m03792 zinc finger (C2H2 type) family protein ... 25 5.7
At5g54340.1 68418.m06767 zinc finger (C2H2 type) protein-related... 25 7.6
At5g52010.1 68418.m06454 zinc finger (C2H2 type) family protein ... 25 7.6
At5g25160.1 68418.m02983 zinc finger (C2H2 type) family protein ... 25 7.6
At4g35610.1 68417.m05058 zinc finger (C2H2 type) family protein ... 25 7.6
At3g53600.1 68416.m05920 zinc finger (C2H2 type) family protein ... 25 7.6
At2g36480.1 68415.m04477 zinc finger (C2H2-type) family protein ... 25 7.6
At1g02040.1 68414.m00124 zinc finger (C2H2 type) family protein ... 25 7.6
>At4g06634.1 68417.m01050 zinc finger (C2H2 type) family protein
contains Pfam PF00096: Zinc finger, C2H2 type
Length = 387
Score = 56.8 bits (131), Expect = 2e-09
Identities = 31/77 (40%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 15 CGKHFSRPWLLRGHVRSHTGEKPYNCA--SCGKSFADRSNLRAHLQTHSSDKKYEC--SR 70
CGK F L+ H HTGE+ Y C CGK+F+ NLR+H++THS + + C S
Sbjct: 115 CGKKFLDSSKLKRHYLIHTGERNYICTYEGCGKAFSLDFNLRSHMKTHSQENYHICPYSG 174
Query: 71 CHKSFALKSYLNKHQEA 87
C K +A + L H A
Sbjct: 175 CVKRYAHEYKLKNHVAA 191
Score = 34.7 bits (76), Expect = 0.009
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Query: 43 CGKSFADRSNLRAHLQTHSSDKKYECSR--CHKSFALKSYLNKH 84
CGK+F D S LR H H +++Y C + C K F S L +H
Sbjct: 86 CGKTFFDVSALRKHSHIH-GERQYVCDQEGCGKKFLDSSKLKRH 128
>At1g72050.2 68414.m08328 zinc finger (C2H2 type) family protein
contains multiple zinc finger domains: PF00096: Zinc
finger, C2H2 type
Length = 412
Score = 52.8 bits (121), Expect = 3e-08
Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 10 HICGVCGKHFSRPWLLRGHVRSHTGEKPYNC--ASCGKSFADRSNLRAHLQTHSSDKKYE 67
H C CG F +P L+ H++SH+ E+ + C C S+ + +L HL TH K ++
Sbjct: 66 HTCQECGAEFKKPAHLKQHMQSHSLERSFTCYVDDCAASYRRKDHLNRHLLTHKG-KLFK 124
Query: 68 CSR--CHKSFALKSYLNKH 84
C + C F+++ + +H
Sbjct: 125 CPKENCKSEFSVQGNVGRH 143
Score = 44.0 bits (99), Expect = 2e-05
Identities = 24/95 (25%), Positives = 43/95 (45%), Gaps = 20/95 (21%)
Query: 10 HICGVCGKHFSRPWLLRGHVRSH------------------TGEKPYNCASCGKSFADRS 51
++C CG S+ +L+ H++SH + C CG F +
Sbjct: 20 YLCQYCGISRSKNYLITKHIQSHHQMELEEERDDEACEVDEESSSNHTCQECGAEFKKPA 79
Query: 52 NLRAHLQTHSSDKKYEC--SRCHKSFALKSYLNKH 84
+L+ H+Q+HS ++ + C C S+ K +LN+H
Sbjct: 80 HLKQHMQSHSLERSFTCYVDDCAASYRRKDHLNRH 114
Score = 40.3 bits (90), Expect = 2e-04
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 12/88 (13%)
Query: 10 HI-CGVCG-KHFSRPWLLRGHVRSHT-----GEKPYNCASCGKSFADRSNLRAHLQ-THS 61
HI C +CG KH + ++ H+R+H GE C +F+ SNL+ H++ H
Sbjct: 274 HINCEICGSKHLKKN--IKRHLRTHDEDSSPGEIKCEVEGCSSTFSKASNLQKHMKAVHD 331
Query: 62 SDKKYECS--RCHKSFALKSYLNKHQEA 87
+ + C C FA K NKH+ +
Sbjct: 332 DIRPFVCGFPGCGMRFAYKHVRNKHENS 359
Score = 30.7 bits (66), Expect = 0.15
Identities = 22/77 (28%), Positives = 32/77 (41%), Gaps = 5/77 (6%)
Query: 15 CGKHFSRPWLLRGHVRSHTGEKPYN--CA--SCGKSFADRSNLRAHLQT-HSSDKKYECS 69
CGK F P L+ H SH C+ C K F + L++H+++ H C
Sbjct: 222 CGKAFKYPSQLQKHQDSHVKLDSVEAFCSEPGCMKYFTNEECLKSHIRSCHQHINCEICG 281
Query: 70 RCHKSFALKSYLNKHQE 86
H +K +L H E
Sbjct: 282 SKHLKKNIKRHLRTHDE 298
Score = 28.3 bits (60), Expect = 0.82
Identities = 20/58 (34%), Positives = 25/58 (43%), Gaps = 6/58 (10%)
Query: 33 TGEKPYNCAS--CGKSFADRSNLRAHLQTHSSDKKYE--CSR--CHKSFALKSYLNKH 84
TG+K C CGK+F S L+ H +H E CS C K F + L H
Sbjct: 210 TGQKQVVCKEIGCGKAFKYPSQLQKHQDSHVKLDSVEAFCSEPGCMKYFTNEECLKSH 267
>At5g04240.1 68418.m00414 zinc finger (C2H2 type) family protein /
transcription factor jumonji (jmj) family protein
contains Pfam domians PF02375: jmjN domain, PF02373: jmjC
domain and PF00096: Zinc finger, C2H2 type
Length = 1327
Score = 40.7 bits (91), Expect = 1e-04
Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
Query: 15 CGKHFSRPWLLRGHVRSHTGEKPYNCA--SCGKSFADRSNLRAHLQTHSSDKKYEC--SR 70
CGK F L H R H E+P+ C+ C +F + HL+ H+ ++ Y C
Sbjct: 1245 CGKKFRAHKYLVLHQRVHKDERPFECSWKGCSMTFKWQWARTEHLRLHTGERPYICKVDG 1304
Query: 71 CHKSFALKSYLNKHQ 85
C SF S ++H+
Sbjct: 1305 CGLSFRFVSDYSRHR 1319
>At1g27730.1 68414.m03389 zinc finger (C2H2 type) family protein
(ZAT10) / salt-tolerance zinc finger protein (STZ)
identical to salt-tolerance zinc finger protein
GB:CAA64820 GI:1565227 from [Arabidopsis thaliana];
contains Pfam domain, PF00096: Zinc finger, C2H2 type;
identical to cDNA zinc finger protein STZ/ZAT10
(STZ/ZAT10) GI:9965730
Length = 227
Score = 40.7 bits (91), Expect = 1e-04
Identities = 23/79 (29%), Positives = 32/79 (40%)
Query: 7 RMGHICGVCGKHFSRPWLLRGHVRSHTGEKPYNCASCGKSFADRSNLRAHLQTHSSDKKY 66
++ + C VC K FS L GH SH + G + S T S K +
Sbjct: 77 KLSYKCSVCDKTFSSYQALGGHKASHRKNLSQTLSGGGDDHSTSSATTTSAVTTGSGKSH 136
Query: 67 ECSRCHKSFALKSYLNKHQ 85
C+ C+KSF L H+
Sbjct: 137 VCTICNKSFPSGQALGGHK 155
Score = 29.5 bits (63), Expect = 0.35
Identities = 14/38 (36%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Query: 10 HICGVCGKHFSRPWLLRGHVRSH-TGEKPYNCASCGKS 46
H+C +C K F L GH R H G N +S S
Sbjct: 136 HVCTICNKSFPSGQALGGHKRCHYEGNNNINTSSVSNS 173
>At3g49930.1 68416.m05460 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 215
Score = 40.3 bits (90), Expect = 2e-04
Identities = 24/80 (30%), Positives = 33/80 (41%), Gaps = 1/80 (1%)
Query: 6 HRMGHICGVCGKHFSRPWLLRGHVRSHTGEKPYNCASCGKSFADRSNLRAHLQTHSSDKK 65
H+ + C VCGK F L GH SH + + + + N+ L S K
Sbjct: 90 HQKDYKCSVCGKSFPSYQALGGHKTSHRKPVSVDVNNSNGTVTNNGNISNGL-VGQSGKT 148
Query: 66 YECSRCHKSFALKSYLNKHQ 85
+ CS C KSF L H+
Sbjct: 149 HNCSICFKSFPSGQALGGHK 168
Score = 25.0 bits (52), Expect = 7.6
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 36 KPYNCASCGKSFADRSNLRAHLQTH 60
K +NC+ C KSF L H + H
Sbjct: 147 KTHNCSICFKSFPSGQALGGHKRCH 171
Score = 25.0 bits (52), Expect = 7.6
Identities = 10/23 (43%), Positives = 11/23 (47%)
Query: 10 HICGVCGKHFSRPWLLRGHVRSH 32
H C +C K F L GH R H
Sbjct: 149 HNCSICFKSFPSGQALGGHKRCH 171
>At1g72050.1 68414.m08329 zinc finger (C2H2 type) family protein
contains multiple zinc finger domains: PF00096: Zinc
finger, C2H2 type
Length = 324
Score = 40.3 bits (90), Expect = 2e-04
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 12/88 (13%)
Query: 10 HI-CGVCG-KHFSRPWLLRGHVRSHT-----GEKPYNCASCGKSFADRSNLRAHLQ-THS 61
HI C +CG KH + ++ H+R+H GE C +F+ SNL+ H++ H
Sbjct: 186 HINCEICGSKHLKKN--IKRHLRTHDEDSSPGEIKCEVEGCSSTFSKASNLQKHMKAVHD 243
Query: 62 SDKKYECS--RCHKSFALKSYLNKHQEA 87
+ + C C FA K NKH+ +
Sbjct: 244 DIRPFVCGFPGCGMRFAYKHVRNKHENS 271
Score = 30.7 bits (66), Expect = 0.15
Identities = 22/77 (28%), Positives = 32/77 (41%), Gaps = 5/77 (6%)
Query: 15 CGKHFSRPWLLRGHVRSHTGEKPYN--CA--SCGKSFADRSNLRAHLQT-HSSDKKYECS 69
CGK F P L+ H SH C+ C K F + L++H+++ H C
Sbjct: 134 CGKAFKYPSQLQKHQDSHVKLDSVEAFCSEPGCMKYFTNEECLKSHIRSCHQHINCEICG 193
Query: 70 RCHKSFALKSYLNKHQE 86
H +K +L H E
Sbjct: 194 SKHLKKNIKRHLRTHDE 210
Score = 29.5 bits (63), Expect = 0.35
Identities = 14/54 (25%), Positives = 27/54 (50%), Gaps = 5/54 (9%)
Query: 35 EKPYNCA--SCGKSFADRSNLRAHLQTHSSDKKYECSR--CHKSFALKSYLNKH 84
E+ + C C S+ + +L HL TH K ++C + C F+++ + +H
Sbjct: 3 ERSFTCYVDDCAASYRRKDHLNRHLLTHKG-KLFKCPKENCKSEFSVQGNVGRH 55
Score = 28.3 bits (60), Expect = 0.82
Identities = 20/58 (34%), Positives = 25/58 (43%), Gaps = 6/58 (10%)
Query: 33 TGEKPYNCAS--CGKSFADRSNLRAHLQTHSSDKKYE--CSR--CHKSFALKSYLNKH 84
TG+K C CGK+F S L+ H +H E CS C K F + L H
Sbjct: 122 TGQKQVVCKEIGCGKAFKYPSQLQKHQDSHVKLDSVEAFCSEPGCMKYFTNEECLKSH 179
>At1g68130.1 68414.m07782 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 419
Score = 40.3 bits (90), Expect = 2e-04
Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 12/90 (13%)
Query: 2 HVLTHRMGHICGVCGKHFSRPWLLRGHVRSHTGEKPYNCASCGKSFADRSNLRAHLQTHS 61
H H +G + G+ KHF R H+ K + C C K +A +S+ +AHL+T
Sbjct: 122 HNPCHALGDLVGI-KKHFRR---------KHSNHKQWICERCSKGYAVQSDYKAHLKT-C 170
Query: 62 SDKKYECSRCHKSFALKSYLNKHQEAACVR 91
+ + C C + F+ +HQ+ VR
Sbjct: 171 GTRGHSCD-CGRVFSRVESFIEHQDTCTVR 199
>At1g51220.1 68414.m05761 zinc finger (C2H2 type) protein (WIP5)
identical to WIP5 protein [Arabidopsis thaliana]
gi|18376498|emb|CAC86167; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 337
Score = 40.3 bits (90), Expect = 2e-04
Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Query: 25 LRGHVRSHTGEKPYNCASCGKSFADRSNLRAHLQTHSSDKKYECSRCHKSFALKSYLNKH 84
L+ H + G KP+ C CGK+FA + + R H + K + CS C F K L H
Sbjct: 249 LQTHYKRKHGSKPFACRMCGKAFAVKGDWRTH--EKNCGKLWYCS-CGSDFKHKRSLKDH 305
Query: 85 QEA 87
+A
Sbjct: 306 VKA 308
Score = 29.1 bits (62), Expect = 0.47
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 45 KSFADRSNLRAHLQTHSSDKKYECSRCHKSFALKSYLNKHQE 86
K D L+ H + K + C C K+FA+K H++
Sbjct: 241 KPLKDFRTLQTHYKRKHGSKPFACRMCGKAFAVKGDWRTHEK 282
>At1g25250.1 68414.m03133 zinc finger (C2H2 type) family protein
contains zinc finger, C2H2 type, domain, PROSITE:PS00028
Length = 362
Score = 39.9 bits (89), Expect = 2e-04
Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 12/90 (13%)
Query: 2 HVLTHRMGHICGVCGKHFSRPWLLRGHVRSHTGEKPYNCASCGKSFADRSNLRAHLQTHS 61
H H +G + G+ KHF R H+ K + C C K +A +S+ +AHL+T
Sbjct: 92 HDPCHALGDLVGI-KKHFRR---------KHSVHKQWVCERCSKGYAVQSDYKAHLKTCG 141
Query: 62 SDKKYECSRCHKSFALKSYLNKHQEAACVR 91
S + + C C + F+ +HQ+ +R
Sbjct: 142 S-RGHSCD-CGRVFSRVESFIEHQDTCTIR 169
>At3g48430.1 68416.m05287 zinc finger (C2H2 type) family protein /
transcription factor jumonji (jmj) family protein
contains Pfam domains PF02375: jmjN domain, PF02373: jmjC
domain and PF00096: Zinc finger, C2H2 type
Length = 1354
Score = 39.5 bits (88), Expect = 3e-04
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 6/82 (7%)
Query: 10 HICGV--CGKHFSRPWLLRGHVRSHTGEKPYNC--ASCGKSFADRSNLRAHLQTHSSDKK 65
+IC + CGK+F L H R H+ ++P C C +F + H++ H+ +
Sbjct: 1260 NICPIKGCGKNFFSHKYLVQHQRVHSDDRPLKCPWKGCKMTFKWAWSRTEHIRVHTGARP 1319
Query: 66 YECSR--CHKSFALKSYLNKHQ 85
Y C+ C ++F S ++H+
Sbjct: 1320 YVCAEPDCGQTFRFVSDFSRHK 1341
Score = 37.5 bits (83), Expect = 0.001
Identities = 21/54 (38%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Query: 15 CGKHFSRPWLLRGHVRSHTGEKPYNCA--SCGKSFADRSNLRAH-LQTHSSDKK 65
C F W H+R HTG +PY CA CG++F S+ H +T S KK
Sbjct: 1297 CKMTFKWAWSRTEHIRVHTGARPYVCAEPDCGQTFRFVSDFSRHKRKTGHSVKK 1350
>At3g50700.1 68416.m05547 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 452
Score = 38.3 bits (85), Expect = 8e-04
Identities = 24/96 (25%), Positives = 40/96 (41%), Gaps = 20/96 (20%)
Query: 11 ICGVCGKHFSR-------------PWLLRGHVRSHTGEKPYNC--ASC-----GKSFADR 50
+C +C K F R PW LR +K Y C SC ++ D
Sbjct: 64 VCEICNKGFQRDQNLQLHRRGHNLPWKLRQKSNKEVKKKVYVCPEVSCVHHDPSRALGDL 123
Query: 51 SNLRAHLQTHSSDKKYECSRCHKSFALKSYLNKHQE 86
+ ++ H +KK++C +C K +A++S H +
Sbjct: 124 TGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSK 159
>At3g20880.1 68416.m02640 zinc finger (C2H2 type) protein (WIP4)
identical to WIP4 protein [Arabidopsis thaliana]
gi|18376500|emb|CAC86168; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 412
Score = 38.3 bits (85), Expect = 8e-04
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Query: 25 LRGHVRSHTGEKPYNCASCGKSFADRSNLRAHLQTHSSDKKYECSRCHKSFALKSYLNKH 84
L+ H + G +P+ C CGK+FA + + R H + K + CS C F K L H
Sbjct: 327 LQTHYKRKHGVRPFACRRCGKAFAVKGDWRTH--EKNCGKLWYCS-CGSDFKHKRSLKDH 383
Query: 85 QEA 87
+A
Sbjct: 384 VKA 386
Score = 27.9 bits (59), Expect = 1.1
Identities = 11/38 (28%), Positives = 19/38 (50%)
Query: 49 DRSNLRAHLQTHSSDKKYECSRCHKSFALKSYLNKHQE 86
D L+ H + + + C RC K+FA+K H++
Sbjct: 323 DFRTLQTHYKRKHGVRPFACRRCGKAFAVKGDWRTHEK 360
Score = 25.0 bits (52), Expect = 7.6
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 34 GEKPYNCASCGKSFADRSNLRAHLQTHSS 62
G ++C C K+F +N++ H+ H S
Sbjct: 252 GPTQFSCPLCFKTFNRYNNMQMHMWGHGS 280
>At3g57670.1 68416.m06425 zinc finger (C2H2 type) protein (WIP2)
identical to WIP2 protein [Arabidopsis thaliana]
gi|18027012|gb|AAL55722; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 383
Score = 37.9 bits (84), Expect = 0.001
Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Query: 25 LRGHVRSHTGEKPYNCASCGKSFADRSNLRAHLQTHSSDKKYECSRCHKSFALKSYLNKH 84
L+ H + G KP+ C CGK+FA R + R H + K + C C F K L H
Sbjct: 288 LQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTH--EKNCGKLWYCI-CGSDFKHKRSLKDH 344
Query: 85 QEA 87
+A
Sbjct: 345 IKA 347
Score = 27.5 bits (58), Expect = 1.4
Identities = 11/42 (26%), Positives = 20/42 (47%)
Query: 45 KSFADRSNLRAHLQTHSSDKKYECSRCHKSFALKSYLNKHQE 86
K D L+ H + K + C +C K+FA++ H++
Sbjct: 280 KPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEK 321
Score = 25.0 bits (52), Expect = 7.6
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 34 GEKPYNCASCGKSFADRSNLRAHLQTHSS 62
G ++C C K+F +N++ H+ H S
Sbjct: 213 GPTQFSCPVCFKTFNRYNNMQMHMWGHGS 241
>At2g01940.1 68415.m00129 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 439
Score = 37.9 bits (84), Expect = 0.001
Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 12/90 (13%)
Query: 2 HVLTHRMGHICGVCGKHFSRPWLLRGHVRSHTGEKPYNCASCGKSFADRSNLRAHLQTHS 61
H H +G + G+ KHF R H+ K + C C K +A +S+ +AHL+T
Sbjct: 119 HNPCHALGDLVGI-KKHFRR---------KHSNHKQWVCERCSKGYAVQSDYKAHLKT-C 167
Query: 62 SDKKYECSRCHKSFALKSYLNKHQEAACVR 91
+ + C C + F+ +HQ+ R
Sbjct: 168 GTRGHSCD-CGRVFSRVESFIEHQDNCSAR 196
>At5g66730.1 68418.m08412 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 500
Score = 37.5 bits (83), Expect = 0.001
Identities = 23/96 (23%), Positives = 39/96 (40%), Gaps = 20/96 (20%)
Query: 11 ICGVCGKHFSR-------------PWLLRGHVRSHTGEKPYNCASCG-------KSFADR 50
+C +C K F R PW LR +K Y C G ++ D
Sbjct: 62 VCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSTKEVRKKVYVCPVSGCVHHDPSRALGDL 121
Query: 51 SNLRAHLQTHSSDKKYECSRCHKSFALKSYLNKHQE 86
+ ++ H +KK++C +C K +A++S H +
Sbjct: 122 TGIKKHFCRKHGEKKWKCEKCSKKYAVQSDWKAHSK 157
>At1g08290.1 68414.m00915 zinc finger (C2H2 type) protein (WIP3)
identical to WIP3 protein [Arabidopsis thaliana]
gi|18027014|gb|AAL55723; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 337
Score = 37.5 bits (83), Expect = 0.001
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Query: 25 LRGHVRSHTGEKPYNCASCGKSFADRSNLRAHLQTHSSDKKYECSRCHKSFALKSYLNKH 84
L+ H + G KP++C CGK+ A + + R H + K + C+ C F K L H
Sbjct: 252 LQTHYKRKHGSKPFSCGKCGKALAVKGDWRTH--EKNCGKLWYCT-CGSDFKHKRSLKDH 308
Score = 34.7 bits (76), Expect = 0.009
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 4/50 (8%)
Query: 14 VCGKHFSRPWLLRGHVRSHTGEKPYNCASCGKSFADRSNLRAHLQTHSSD 63
VCGK F W+ + H G + C+ C K+F +N++ H+ H S+
Sbjct: 160 VCGKRF---WI-PSPAQIHVGPMQFACSICSKTFNRYNNMQMHMWGHGSE 205
Score = 28.7 bits (61), Expect = 0.62
Identities = 11/42 (26%), Positives = 19/42 (45%)
Query: 45 KSFADRSNLRAHLQTHSSDKKYECSRCHKSFALKSYLNKHQE 86
K D L+ H + K + C +C K+ A+K H++
Sbjct: 244 KPLKDFRTLQTHYKRKHGSKPFSCGKCGKALAVKGDWRTHEK 285
Score = 27.9 bits (59), Expect = 1.1
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 7/53 (13%)
Query: 12 CGVCGKHFSRPWLLRGHVRSHTGE--KPYNCASCGKSFADRSNLRAHLQTHSS 62
CG CGK + ++G R+H K + C +CG F + +L+ H+++ S
Sbjct: 267 CGKCGKALA----VKGDWRTHEKNCGKLWYC-TCGSDFKHKRSLKDHIRSFGS 314
>At1g03840.1 68414.m00365 zinc finger (C2H2 type) family protein
contains Zinc finger,C2H2 type,domain contains Pfam
domain, PF00096: Zinc finger, C2H2 type
Length = 506
Score = 37.5 bits (83), Expect = 0.001
Identities = 24/101 (23%), Positives = 42/101 (41%), Gaps = 20/101 (19%)
Query: 11 ICGVCGKHFSR-------------PWLLRGHVRSHTGEKPYNCA--SC-----GKSFADR 50
+C +CGK F R PW L+ ++ Y C SC ++ D
Sbjct: 71 LCEICGKGFQRDQNLQLHRRGHNLPWKLKQRTSKEVRKRVYVCPEKSCVHHHPTRALGDL 130
Query: 51 SNLRAHLQTHSSDKKYECSRCHKSFALKSYLNKHQEAACVR 91
+ ++ H +KK++C +C K +A++S H + R
Sbjct: 131 TGIKKHFCRKHGEKKWKCEKCAKRYAVQSDWKAHSKTCGTR 171
>At3g29340.1 68416.m03684 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 650
Score = 37.1 bits (82), Expect = 0.002
Identities = 26/83 (31%), Positives = 34/83 (40%), Gaps = 5/83 (6%)
Query: 4 LTHRMGHICGVCGKHFSRPWLLRGHVRSHTGEKPYNCASCGKSFADRSNLRAHLQ--THS 61
L + H C +CGK F L GH R H +P + F++ ++ LQ S
Sbjct: 37 LQSKSSHKCKICGKSFECYQALGGHQRIH---RPIKEKLSKQEFSEVYPRKSKLQKRPES 93
Query: 62 SDKKYECSRCHKSFALKSYLNKH 84
S YEC C K F L H
Sbjct: 94 SSSCYECKVCGKIFGCYRGLGGH 116
Score = 29.1 bits (62), Expect = 0.47
Identities = 15/33 (45%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Query: 53 LRAHLQTHSSDKKYECSRCHKSFALKSYLNKHQ 85
LR LQ S Y+CS C KSF L HQ
Sbjct: 433 LRRKLQKKSRSS-YKCSICEKSFVCSQALGSHQ 464
Score = 27.9 bits (59), Expect = 1.1
Identities = 12/36 (33%), Positives = 15/36 (41%)
Query: 30 RSHTGEKPYNCASCGKSFADRSNLRAHLQTHSSDKK 65
R + Y C CGK F L H + H S K+
Sbjct: 90 RPESSSSCYECKVCGKIFGCYRGLGGHTKLHRSTKR 125
Score = 26.2 bits (55), Expect = 3.3
Identities = 17/51 (33%), Positives = 22/51 (43%), Gaps = 2/51 (3%)
Query: 22 PWLLRGHVRSHTGEKPY-NCASCGKSFADRSNLRAHLQTHSS-DKKYECSR 70
P LR +++ T K +C CGKSF L H + H K C R
Sbjct: 181 PSTLRSKLQTKTQWKSSCHCKICGKSFVCSQGLGNHKRVHREISGKLACKR 231
Score = 25.8 bits (54), Expect = 4.3
Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 3/33 (9%)
Query: 53 LRAHLQTHSSDKKYECSRCHKSFALKSYLNKHQ 85
LR++LQ+ SS K C C KSF L HQ
Sbjct: 33 LRSNLQSKSSHK---CKICGKSFECYQALGGHQ 62
Score = 25.0 bits (52), Expect = 7.6
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 10 HICGVCGKHFSRPWLLRGHVRSHTG 34
H C CG+ F + GH R H+G
Sbjct: 324 HGCKTCGRKFGTLKGVYGHQRMHSG 348
>At1g26590.1 68414.m03239 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 361
Score = 37.1 bits (82), Expect = 0.002
Identities = 27/90 (30%), Positives = 39/90 (43%), Gaps = 9/90 (10%)
Query: 11 ICGVCGKHFSRPWLLRGHVRSHTGEKP--YNCASCGKSFADRSNLRAHLQTHSSDKKYEC 68
+C C K F L GH+R HT E YN + K D+ + A Q H ++ C
Sbjct: 10 LCKYCYKTFPSGKALGGHIRIHTNENSVGYN-GNKKKRLVDQRKMMA--QKHKQQQQVGC 66
Query: 69 SRCHKSF----ALKSYLNKHQEAACVRSDD 94
C + F AL+ ++ H E + DD
Sbjct: 67 RECGRVFVSLKALRGHMACHGEVKKMLMDD 96
Score = 27.9 bits (59), Expect = 1.1
Identities = 11/25 (44%), Positives = 14/25 (56%)
Query: 9 GHICGVCGKHFSRPWLLRGHVRSHT 33
GH C +C + F L GH RSH+
Sbjct: 314 GHECPICFRMFKSGQALGGHKRSHS 338
>At5g44160.1 68418.m05404 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 466
Score = 36.7 bits (81), Expect = 0.002
Identities = 24/101 (23%), Positives = 41/101 (40%), Gaps = 20/101 (19%)
Query: 11 ICGVCGKHFSR-------------PWLLRGHVRSHTGEKPYNCA--SC-----GKSFADR 50
+C VCGK F R PW L+ ++ Y C +C ++ D
Sbjct: 67 LCEVCGKGFQRDQNLQLHRRGHNLPWKLKQRTSKEVRKRVYVCPEKTCVHHHSSRALGDL 126
Query: 51 SNLRAHLQTHSSDKKYECSRCHKSFALKSYLNKHQEAACVR 91
+ ++ H +KK+ C +C K +A++S H + R
Sbjct: 127 TGIKKHFCRKHGEKKWTCEKCAKRYAVQSDWKAHSKTCGTR 167
>At5g04340.1 68418.m00426 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 238
Score = 36.7 bits (81), Expect = 0.002
Identities = 25/77 (32%), Positives = 32/77 (41%), Gaps = 3/77 (3%)
Query: 12 CGVCGKHFSRPWLLRGHVRSHTGEKPYNCASCGKSFADRSNLRAHLQTHS---SDKKYEC 68
C VC K FS L GH SH ++ G + S + + S K + C
Sbjct: 91 CSVCDKAFSSYQALGGHKASHRKSFSLTQSAGGDELSTSSAITTSGISGGGGGSVKSHVC 150
Query: 69 SRCHKSFALKSYLNKHQ 85
S CHKSFA L H+
Sbjct: 151 SICHKSFATGQALGGHK 167
Score = 28.7 bits (61), Expect = 0.62
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 10 HICGVCGKHFSRPWLLRGHVRSH 32
H+C +C K F+ L GH R H
Sbjct: 148 HVCSICHKSFATGQALGGHKRCH 170
>At3g46080.1 68416.m04986 zinc finger (C2H2 type) family protein
contains zinc finger, C2H2 type, domain, PROSITE:PS00028
Length = 164
Score = 36.7 bits (81), Expect = 0.002
Identities = 19/59 (32%), Positives = 25/59 (42%)
Query: 10 HICGVCGKHFSRPWLLRGHVRSHTGEKPYNCASCGKSFADRSNLRAHLQTHSSDKKYEC 68
H C +CG F L GH+R H EK +SF + L+ SS K+ C
Sbjct: 85 HPCPICGVEFPMGQALGGHMRRHRSEKASPGTLVTRSFLPETTTVTTLKKSSSGKRVAC 143
>At3g13810.1 68416.m01744 zinc finger (C2H2 type) family protein
similar to finger protein pcp1 GB:S48856 from [Solanum
tuberosum] contains Pfam domain, PF00096: Zinc finger,
C2H2 type
Length = 513
Score = 36.7 bits (81), Expect = 0.002
Identities = 25/97 (25%), Positives = 42/97 (43%), Gaps = 21/97 (21%)
Query: 11 ICGVCGKHFSRPWLLRGHVRSHT--------------GEKPYNC--ASC-----GKSFAD 49
+C +C K F R L+ H R H +K Y C ASC ++ D
Sbjct: 100 VCEICNKGFQRDQNLQLHRRGHNLPWKLKQRSNKEVIRKKVYVCPEASCVHHDPSRALGD 159
Query: 50 RSNLRAHLQTHSSDKKYECSRCHKSFALKSYLNKHQE 86
+ ++ H +KK++C +C K +A++S H +
Sbjct: 160 LTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDCKAHSK 196
Score = 35.9 bits (79), Expect = 0.004
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Query: 30 RSHTGEKPYNCASCGKSFADRSNLRAHLQTHSSDKKYECSRCHKSFALKSYLNKHQ 85
R H GEK + C C K +A +S+ +AH +T K+Y C C F+ + H+
Sbjct: 169 RKH-GEKKWKCDKCSKKYAVQSDCKAHSKT-CGTKEYRCD-CGTLFSRRDSFITHR 221
>At2g02070.1 68415.m00143 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 602
Score = 36.7 bits (81), Expect = 0.002
Identities = 25/96 (26%), Positives = 39/96 (40%), Gaps = 20/96 (20%)
Query: 11 ICGVCGKHFSR-------------PWLLRGHVRSHTGEKPYNCA--SC-----GKSFADR 50
IC VC K F R PW L+ K Y C SC ++ D
Sbjct: 82 ICEVCNKGFQREQNLQLHRRGHNLPWKLKQKSTKEVKRKVYLCPEPSCVHHDPSRALGDL 141
Query: 51 SNLRAHLQTHSSDKKYECSRCHKSFALKSYLNKHQE 86
+ ++ H +KK++C +C K +A++S H +
Sbjct: 142 TGIKKHYYRKHGEKKWKCDKCSKRYAVQSDWKAHSK 177
Score = 35.5 bits (78), Expect = 0.005
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Query: 28 HVRSHTGEKPYNCASCGKSFADRSNLRAHLQTHSSDKKYECSRCHKSFALKSYLNKHQ 85
+ R H GEK + C C K +A +S+ +AH +T K+Y C C F+ + H+
Sbjct: 148 YYRKH-GEKKWKCDKCSKRYAVQSDWKAHSKT-CGTKEYRCD-CGTLFSRRDSFITHR 202
>At1g55110.1 68414.m06294 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 455
Score = 36.7 bits (81), Expect = 0.002
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Query: 30 RSHTGEKPYNCASCGKSFADRSNLRAHLQTHSSDKKYECSRCHKSFALKSYLNKHQ 85
R H GEK + C C K +A +S+ +AH +T K+Y+C C F+ + H+
Sbjct: 162 RKH-GEKKWKCEKCSKKYAVQSDWKAHAKT-CGTKEYKCD-CGTLFSRRDSFITHR 214
Score = 34.7 bits (76), Expect = 0.009
Identities = 25/95 (26%), Positives = 39/95 (41%), Gaps = 21/95 (22%)
Query: 11 ICGVCGKHFSRPWLLRGHVRSHT--------------GEKPYNCASCG-------KSFAD 49
IC VC K F R L+ H R H +K Y C G ++ D
Sbjct: 93 ICEVCNKGFQRDQNLQLHKRGHNLPWKLKQRSNKDVVRKKVYVCPEPGCVHHHPSRALGD 152
Query: 50 RSNLRAHLQTHSSDKKYECSRCHKSFALKSYLNKH 84
+ ++ H +KK++C +C K +A++S H
Sbjct: 153 LTGIKKHFFRKHGEKKWKCEKCSKKYAVQSDWKAH 187
>At1g34790.1 68414.m04337 transparent testa 1 protein (TT1) / zinc
finger (C2H2 type) protein TT1 identical to transparent
testa 1 GI:18253279 from [Arabidopsis thaliana];
contains Pfam profile PF00096: Zinc finger, C2H2 type
Length = 303
Score = 36.7 bits (81), Expect = 0.002
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Query: 25 LRGHVRSHTGEKPYNCASCGKSFADRSNLRAHLQTHSSDKKYECSRCHKSFALKSYLNKH 84
L+ H + G KP++C CGK A + + R H + K++ C C F K L H
Sbjct: 216 LQTHYKRKHGHKPFSCRLCGKLLAVKGDWRTH--EKNCGKRWVCV-CGSDFKHKRSLKDH 272
Query: 85 QEA 87
+A
Sbjct: 273 VKA 275
Score = 25.0 bits (52), Expect = 7.6
Identities = 11/42 (26%), Positives = 17/42 (40%)
Query: 45 KSFADRSNLRAHLQTHSSDKKYECSRCHKSFALKSYLNKHQE 86
K D L+ H + K + C C K A+K H++
Sbjct: 208 KPLKDFRTLQTHYKRKHGHKPFSCRLCGKLLAVKGDWRTHEK 249
>At1g14580.1 68414.m01734 zinc finger (C2H2 type) family protein
similar to zinc finger protein ID1 GB:AAC18941
GI:3170601 from [Zea mays] contains Pfam domain,
PF00096: Zinc finger, C2H2 type
Length = 467
Score = 36.3 bits (80), Expect = 0.003
Identities = 24/96 (25%), Positives = 39/96 (40%), Gaps = 20/96 (20%)
Query: 11 ICGVCGKHFSR-------------PWLLRGHVRSHTGEKPYNCA--SC-----GKSFADR 50
+C VC K F R PW L+ K Y C SC ++ D
Sbjct: 83 LCEVCNKGFQREQNLQLHRRGHNLPWKLKQKSNKEVRRKVYLCPEPSCVHHDPARALGDL 142
Query: 51 SNLRAHLQTHSSDKKYECSRCHKSFALKSYLNKHQE 86
+ ++ H +KK++C +C K +A++S H +
Sbjct: 143 TGIKKHYYRKHGEKKWKCDKCSKRYAVQSDWKAHSK 178
Score = 35.1 bits (77), Expect = 0.007
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Query: 28 HVRSHTGEKPYNCASCGKSFADRSNLRAHLQTHSSDKKYECSRCHKSFALK-SYL 81
+ R H GEK + C C K +A +S+ +AH +T K+Y C C F+ + SY+
Sbjct: 149 YYRKH-GEKKWKCDKCSKRYAVQSDWKAHSKT-CGTKEYRCD-CGTIFSRRDSYI 200
>At3g46070.1 68416.m04985 zinc finger (C2H2 type) family protein
contains zinc finger, C2H2 type, domain, PROSITE:PS00028
Length = 170
Score = 35.9 bits (79), Expect = 0.004
Identities = 22/67 (32%), Positives = 27/67 (40%), Gaps = 3/67 (4%)
Query: 5 THRMGHICGVCGKHFSRPWLLRGHVRSHTGEKPYNCAS---CGKSFADRSNLRAHLQTHS 61
T H C +CG F L GH+R H EK AS SF + L+ S
Sbjct: 81 TTTTAHTCPICGLEFPMGQALGGHMRKHRNEKEREKASNVLVTHSFMPETTTVTTLKKSS 140
Query: 62 SDKKYEC 68
S K+ C
Sbjct: 141 SGKRVAC 147
Score = 25.4 bits (53), Expect = 5.7
Identities = 15/62 (24%), Positives = 24/62 (38%)
Query: 6 HRMGHICGVCGKHFSRPWLLRGHVRSHTGEKPYNCASCGKSFADRSNLRAHLQTHSSDKK 65
HR H S P + ++ T + C CG F L H++ H ++K+
Sbjct: 54 HRASHSKLTNSDDKSLPGSPKKKPKTTTTTTAHTCPICGLEFPMGQALGGHMRKHRNEKE 113
Query: 66 YE 67
E
Sbjct: 114 RE 115
>At2g02080.1 68415.m00144 zinc finger (C2H2 type) family protein
contains Pfam domain PF00096: Zinc finger, C2H2 type
Length = 516
Score = 35.9 bits (79), Expect = 0.004
Identities = 24/96 (25%), Positives = 39/96 (40%), Gaps = 20/96 (20%)
Query: 11 ICGVCGKHFSR-------------PWLLRGHVRSHTGEKPYNCA--SC-----GKSFADR 50
IC VC K F R PW L+ K Y C +C ++ D
Sbjct: 84 ICDVCNKGFQREQNLQLHRRGHNLPWKLKQKSTKEVKRKVYLCPEPTCVHHDPSRALGDL 143
Query: 51 SNLRAHLQTHSSDKKYECSRCHKSFALKSYLNKHQE 86
+ ++ H +KK++C +C K +A++S H +
Sbjct: 144 TGIKKHYYRKHGEKKWKCEKCSKRYAVQSDWKAHSK 179
Score = 35.5 bits (78), Expect = 0.005
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Query: 28 HVRSHTGEKPYNCASCGKSFADRSNLRAHLQTHSSDKKYECSRCHKSFALK-SYL 81
+ R H GEK + C C K +A +S+ +AH +T K+Y C C F+ + SY+
Sbjct: 150 YYRKH-GEKKWKCEKCSKRYAVQSDWKAHSKT-CGTKEYRCD-CGTIFSRRDSYI 201
>At5g43170.1 68418.m05269 zinc finger (C2H2 type) protein 3 (AZF3)
identical to Cys2/His2-type zinc finger protein 3
[Arabidopsis thaliana] gi|6009889|dbj|BAA85109
Length = 193
Score = 34.7 bits (76), Expect = 0.009
Identities = 24/64 (37%), Positives = 27/64 (42%), Gaps = 15/64 (23%)
Query: 12 CGVCGKHFSRPWLLRGHVRSH---------------TGEKPYNCASCGKSFADRSNLRAH 56
CGVC K FS L GH SH T K + C+ CGKSFA L H
Sbjct: 77 CGVCYKTFSSYQALGGHKASHRSLYGGGENDKSTPSTAVKSHVCSVCGKSFATGQALGGH 136
Query: 57 LQTH 60
+ H
Sbjct: 137 KRCH 140
Score = 32.3 bits (70), Expect = 0.050
Identities = 12/23 (52%), Positives = 14/23 (60%)
Query: 10 HICGVCGKHFSRPWLLRGHVRSH 32
H+C VCGK F+ L GH R H
Sbjct: 118 HVCSVCGKSFATGQALGGHKRCH 140
>At3g46090.1 68416.m04987 zinc finger (C2H2 type) family protein
(ZAT7) identical to zinc finger protein ZAT7
[Arabidopsis thaliana] gi|1418341|emb|CAA67234; contains
Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 168
Score = 34.7 bits (76), Expect = 0.009
Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Query: 7 RMGHICGVCGKHFSRPWLLRGHVRSHTGEKPYNCASCGKSFADRSNLRAHLQTHSSDKKY 66
+ H C +CG F L GH+R H EK + + +SF + L+ SS K+
Sbjct: 83 KTSHPCPICGVKFPMGQALGGHMRRHRNEK-VSGSLVTRSFLPETTTVTALKKFSSGKRV 141
Query: 67 EC 68
C
Sbjct: 142 AC 143
>At5g03150.1 68418.m00263 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 503
Score = 34.3 bits (75), Expect = 0.012
Identities = 24/102 (23%), Positives = 42/102 (41%), Gaps = 21/102 (20%)
Query: 11 ICGVCGKHFSRPWLLRGHVRSHT--------------GEKPYNCA--SC-----GKSFAD 49
+C +C K F R L+ H R H +K Y C +C ++ D
Sbjct: 83 VCEICNKGFQRDQNLQLHRRGHNLPWKLKQRSKQEVIKKKVYICPIKTCVHHDASRALGD 142
Query: 50 RSNLRAHLQTHSSDKKYECSRCHKSFALKSYLNKHQEAACVR 91
+ ++ H +KK++C +C K +A++S H + R
Sbjct: 143 LTGIKKHYSRKHGEKKWKCEKCSKKYAVQSDWKAHAKTCGTR 184
>At3g45260.1 68416.m04887 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 446
Score = 34.3 bits (75), Expect = 0.012
Identities = 25/97 (25%), Positives = 40/97 (41%), Gaps = 21/97 (21%)
Query: 11 ICGVCGKHFSRPWLLRGHVRSHT--------------GEKPYNCA--SC-----GKSFAD 49
IC VC K F R L+ H R H +K Y C +C ++ D
Sbjct: 69 ICEVCNKGFKRDQNLQLHRRGHNLPWKLKQRTNKEQVKKKVYICPEKTCVHHDPARALGD 128
Query: 50 RSNLRAHLQTHSSDKKYECSRCHKSFALKSYLNKHQE 86
+ ++ H +KK++C +C K +A+ S H +
Sbjct: 129 LTGIKKHFSRKHGEKKWKCDKCSKKYAVMSDWKAHSK 165
>At5g60470.1 68418.m07584 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 392
Score = 33.5 bits (73), Expect = 0.022
Identities = 18/73 (24%), Positives = 34/73 (46%), Gaps = 8/73 (10%)
Query: 22 PWLLRGHV-RSHTGEKPYNCA--SC-----GKSFADRSNLRAHLQTHSSDKKYECSRCHK 73
PW L+ ++ +K Y C SC ++ D + ++ H +KK++C +C K
Sbjct: 31 PWKLKQKTNKNQVKKKVYICPEKSCVHHDPARALGDLTGIKKHFSRKHGEKKWKCDKCSK 90
Query: 74 SFALKSYLNKHQE 86
+A+ S H +
Sbjct: 91 KYAVISDWKAHNK 103
Score = 25.0 bits (52), Expect = 7.6
Identities = 15/54 (27%), Positives = 21/54 (38%), Gaps = 2/54 (3%)
Query: 40 CASCGKSFADRSNLRAHLQTHSSDKKYECSRCHKSFALKSYLNKHQEAACVRSD 93
C C K F NL+ H + H+ K + K Y+ E +CV D
Sbjct: 8 CEICNKGFQREQNLQLHKRGHNLPWKLKQKTNKNQVKKKVYI--CPEKSCVHHD 59
>At2g23740.1 68415.m02834 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 907
Score = 33.5 bits (73), Expect = 0.022
Identities = 24/64 (37%), Positives = 28/64 (43%), Gaps = 7/64 (10%)
Query: 9 GHICGVCGKHFSRPWLLRGHV--RSHT--GEKPY--NCASCGKSFADRSNLRAHLQ-THS 61
G C +C F R LL HV R H EK C CG F D+ L H+Q H
Sbjct: 495 GFACAICLDSFVRRKLLEIHVEERHHVQFAEKCMLLQCIPCGSHFGDKEQLLVHVQAVHP 554
Query: 62 SDKK 65
S+ K
Sbjct: 555 SECK 558
>At5g04390.1 68418.m00431 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 362
Score = 33.1 bits (72), Expect = 0.029
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 10 HICGVCGKHFSRPWLLRGHVRSHTG 34
H CG+CG F+ L GH+R H G
Sbjct: 229 HECGICGAEFTSGQALGGHMRRHRG 253
>At3g19580.1 68416.m02483 zinc finger (C2H2 type) protein 2 (AZF2)
identical to Cys2/His2-type zinc finger protein 2
[Arabidopsis thaliana] gi|6009885|dbj|BAA85107
Length = 273
Score = 33.1 bits (72), Expect = 0.029
Identities = 26/78 (33%), Positives = 35/78 (44%), Gaps = 5/78 (6%)
Query: 12 CGVCGKHFSRPWLLRGHVRSHTGEKPYNCASCGK-SFADRSNLRAHLQTH---SSDKKYE 67
C VC K F L GH SH + P ++ S A ++ A + H +S K +E
Sbjct: 108 CNVCEKAFPSYQALGGHKASHRIKPPTVISTTADDSTAPTISIVAG-EKHPIAASGKIHE 166
Query: 68 CSRCHKSFALKSYLNKHQ 85
CS CHK F L H+
Sbjct: 167 CSICHKVFPTGQALGGHK 184
>At3g10470.1 68416.m01255 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 398
Score = 33.1 bits (72), Expect = 0.029
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 10 HICGVCGKHFSRPWLLRGHVRSHTG 34
H CG+CG F+ L GH+R H G
Sbjct: 261 HECGICGAEFTSGQALGGHMRRHRG 285
>At1g49900.1 68414.m05596 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 917
Score = 33.1 bits (72), Expect = 0.029
Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 8/74 (10%)
Query: 12 CGVCGKHFSRPWLLRGHVRSHTGEKPYNCASCGKSFADRSNLRAHLQTHSSDKKYECSRC 71
C VCG+ L GH SH + P A+ G+ + + S K ++CS C
Sbjct: 752 CNVCGRELPSYQALGGHKASHRTKPPVENAT-GEKMRPK-------KLAPSGKIHKCSIC 803
Query: 72 HKSFALKSYLNKHQ 85
H+ F+ L H+
Sbjct: 804 HREFSTGQSLGGHK 817
Score = 30.3 bits (65), Expect = 0.20
Identities = 20/74 (27%), Positives = 27/74 (36%), Gaps = 4/74 (5%)
Query: 12 CGVCGKHFSRPWLLRGHVRSHTGEKPYNCASCGKSFADRSNLRAHLQTHSSDKKYECSRC 71
C +C K F+ L GH SH+ A + AD S K ++C C
Sbjct: 195 CSICEKVFTSYQALGGHKASHS----IKAAQLENAGADAGEKTRSKMLSPSGKIHKCDIC 250
Query: 72 HKSFALKSYLNKHQ 85
H F L H+
Sbjct: 251 HVLFPTGQALGGHK 264
Score = 25.8 bits (54), Expect = 4.3
Identities = 10/23 (43%), Positives = 12/23 (52%)
Query: 10 HICGVCGKHFSRPWLLRGHVRSH 32
H C +C + FS L GH R H
Sbjct: 798 HKCSICHREFSTGQSLGGHKRLH 820
>At5g67450.1 68418.m08504 zinc finger (C2H2 type) protein 1 (AZF1)
identical to Cys2/His2-type zinc finger protein 1
[Arabidopsis thaliana] gi|6009887|dbj|BAA85108
Length = 245
Score = 32.7 bits (71), Expect = 0.038
Identities = 26/85 (30%), Positives = 36/85 (42%), Gaps = 11/85 (12%)
Query: 12 CGVCGKHFSRPWLLRGHVRSHTGEKPYNCASCGKSFADRSN-------LRAHLQTHS--- 61
C VCGK FS L GH SH + S + ++ S+ + + T +
Sbjct: 99 CTVCGKSFSSYQALGGHKTSHRKPTNTSITSGNQELSNNSHSNSGSVVINVTVNTGNGVS 158
Query: 62 -SDKKYECSRCHKSFALKSYLNKHQ 85
S K + CS C KSFA L H+
Sbjct: 159 QSGKIHTCSICFKSFASGQALGGHK 183
Score = 28.7 bits (61), Expect = 0.62
Identities = 13/52 (25%), Positives = 22/52 (42%)
Query: 31 SHTGEKPYNCASCGKSFADRSNLRAHLQTHSSDKKYECSRCHKSFALKSYLN 82
S + + Y C CGKSF+ L H +H + ++ + S+ N
Sbjct: 90 SPSDHRDYKCTVCGKSFSSYQALGGHKTSHRKPTNTSITSGNQELSNNSHSN 141
Score = 26.6 bits (56), Expect = 2.5
Identities = 10/23 (43%), Positives = 12/23 (52%)
Query: 10 HICGVCGKHFSRPWLLRGHVRSH 32
H C +C K F+ L GH R H
Sbjct: 164 HTCSICFKSFASGQALGGHKRCH 186
>At4g02670.1 68417.m00362 zinc finger (C2H2 type) family protein
similar to potato PCP1 zinc finger protein, GenBank
accession number X82328 contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 402
Score = 32.7 bits (71), Expect = 0.038
Identities = 24/102 (23%), Positives = 42/102 (41%), Gaps = 21/102 (20%)
Query: 11 ICGVCGKHFSRPWLLRGHVRSHT--------------GEKPYNC--ASCG-----KSFAD 49
+C +C K F R L+ H R H +K Y C +C ++ D
Sbjct: 83 VCEICNKGFQRDQNLQLHRRGHNLPWKLKQKNTKEQQKKKVYVCPETNCAHHHPSRALGD 142
Query: 50 RSNLRAHLQTHSSDKKYECSRCHKSFALKSYLNKHQEAACVR 91
+ ++ H +KK++C +C K +A++S H + R
Sbjct: 143 LTGIKKHFCRKHGEKKWKCEKCSKFYAVQSDWKAHTKICGTR 184
>At5g22890.1 68418.m02677 zinc finger (C2H2 type) family protein
contains Pfam domain PF00096: Zinc finger, C2H2 type
Length = 373
Score = 32.3 bits (70), Expect = 0.050
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 10 HICGVCGKHFSRPWLLRGHVRSHTGE 35
H C +CGK F R LR H+R+H E
Sbjct: 217 HYCQICGKGFKRDANLRMHMRAHGDE 242
Score = 30.7 bits (66), Expect = 0.15
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 40 CASCGKSFADRSNLRAHLQTHSSDKK 65
C CGK F +NLR H++ H + K
Sbjct: 219 CQICGKGFKRDANLRMHMRAHGDEYK 244
>At1g34370.2 68414.m04268 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 499
Score = 32.3 bits (70), Expect = 0.050
Identities = 13/26 (50%), Positives = 15/26 (57%)
Query: 10 HICGVCGKHFSRPWLLRGHVRSHTGE 35
H C +CGK F R LR H+R H E
Sbjct: 244 HFCTICGKGFKRDANLRMHMRGHGDE 269
Score = 30.3 bits (65), Expect = 0.20
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 40 CASCGKSFADRSNLRAHLQTHSSDKK 65
C CGK F +NLR H++ H + K
Sbjct: 246 CTICGKGFKRDANLRMHMRGHGDEYK 271
>At1g34370.1 68414.m04267 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 499
Score = 32.3 bits (70), Expect = 0.050
Identities = 13/26 (50%), Positives = 15/26 (57%)
Query: 10 HICGVCGKHFSRPWLLRGHVRSHTGE 35
H C +CGK F R LR H+R H E
Sbjct: 244 HFCTICGKGFKRDANLRMHMRGHGDE 269
Score = 30.3 bits (65), Expect = 0.20
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 40 CASCGKSFADRSNLRAHLQTHSSDKK 65
C CGK F +NLR H++ H + K
Sbjct: 246 CTICGKGFKRDANLRMHMRGHGDEYK 271
>At5g56200.1 68418.m07012 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 493
Score = 31.9 bits (69), Expect = 0.066
Identities = 12/28 (42%), Positives = 15/28 (53%)
Query: 5 THRMGHICGVCGKHFSRPWLLRGHVRSH 32
+H H+C +C K FS L GH R H
Sbjct: 406 SHNGDHVCNICHKSFSTGQALGGHKRCH 433
Score = 28.7 bits (61), Expect = 0.62
Identities = 16/56 (28%), Positives = 23/56 (41%), Gaps = 1/56 (1%)
Query: 6 HRMGHICGVCGKHFSRPWLLRGHV-RSHTGEKPYNCASCGKSFADRSNLRAHLQTH 60
H+ H+ RP ++ G V RS G+ C C K F L H++ H
Sbjct: 97 HKRIHVLETRKFSMMRPKMVSGMVGRSERGDLEVACCVCYKKFTSMKALYGHMRFH 152
Score = 27.9 bits (59), Expect = 1.1
Identities = 13/26 (50%), Positives = 13/26 (50%)
Query: 10 HICGVCGKHFSRPWLLRGHVRSHTGE 35
HIC CGK F L GH R H E
Sbjct: 79 HICCECGKRFVSGKALGGHKRIHVLE 104
Score = 27.9 bits (59), Expect = 1.1
Identities = 13/30 (43%), Positives = 14/30 (46%)
Query: 7 RMGHICGVCGKHFSRPWLLRGHVRSHTGEK 36
R H+C C K FS L GH SH K
Sbjct: 339 REKHVCVTCNKSFSSYQALGGHRASHNKVK 368
>At1g10480.1 68414.m01180 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 211
Score = 31.9 bits (69), Expect = 0.066
Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 2/58 (3%)
Query: 31 SHTGEKPYNCASCGKSFADRSNLRAHLQTHSSD--KKYECSRCHKSFALKSYLNKHQE 86
S T K + C CGK FA+ L H H + KK + ++ YL HQ+
Sbjct: 53 SLTVMKRHECQYCGKEFANSQALGGHQNAHKKERLKKKRLQLQARRASIGYYLTNHQQ 110
Score = 29.5 bits (63), Expect = 0.35
Identities = 13/33 (39%), Positives = 16/33 (48%)
Query: 4 LTHRMGHICGVCGKHFSRPWLLRGHVRSHTGEK 36
LT H C CGK F+ L GH +H E+
Sbjct: 54 LTVMKRHECQYCGKEFANSQALGGHQNAHKKER 86
Score = 27.1 bits (57), Expect = 1.9
Identities = 11/24 (45%), Positives = 13/24 (54%)
Query: 64 KKYECSRCHKSFALKSYLNKHQEA 87
K++EC C K FA L HQ A
Sbjct: 58 KRHECQYCGKEFANSQALGGHQNA 81
>At4g15180.1 68417.m02328 SET domain-containing protein contains
Pfam profile PF00856: SET domain
Length = 2326
Score = 31.5 bits (68), Expect = 0.088
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 38 YNCASCGKSFAD--RSNLRAHLQTHSSDKKYECSRCHKSFALKSYLNKHQEAA 88
Y + C K D RS H HS+++ Y S K+ +L+ Y KHQ+A+
Sbjct: 359 YGSSKCRKLSDDCSRSLHSDHYSQHSAERLYRDSYPSKNSSLEKYPRKHQDAS 411
>At5g61470.1 68418.m07713 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 304
Score = 30.7 bits (66), Expect = 0.15
Identities = 13/23 (56%), Positives = 15/23 (65%)
Query: 11 ICGVCGKHFSRPWLLRGHVRSHT 33
IC VC K FS L GH+R+HT
Sbjct: 10 ICQVCKKSFSNGKALGGHMRAHT 32
>At3g56250.1 68416.m06251 expressed protein
Length = 222
Score = 30.3 bits (65), Expect = 0.20
Identities = 25/82 (30%), Positives = 34/82 (41%), Gaps = 3/82 (3%)
Query: 13 GVCGKHFSRPWLLRGHVRSHTGEKPYNCASCGKSFADRSNLRAHLQTHSSDKKYECSRCH 72
GV K F+ PW + R +G+K AS S A R +R L + S K + S +
Sbjct: 108 GVSDKDFTEPWSVYTVRRKASGQKRSKDASSSTSAAAR--IRLDLSSSSGKKTRQASE-N 164
Query: 73 KSFALKSYLNKHQEAACVRSDD 94
K LK K Q +D
Sbjct: 165 KKKTLKVAPKKRQRTVKQEKED 186
>At5g27880.1 68418.m03344 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 278
Score = 29.9 bits (64), Expect = 0.27
Identities = 18/61 (29%), Positives = 23/61 (37%)
Query: 27 GHVRSHTGEKPYNCASCGKSFADRSNLRAHLQTHSSDKKYECSRCHKSFALKSYLNKHQE 86
G + T E+ +S G S R S+K Y C C K F+ L HQ
Sbjct: 41 GSPQEVTSERRIENSSFGSSAVRRGREIMKFYPSKSNKIYTCHFCKKGFSTSQALGGHQN 100
Query: 87 A 87
A
Sbjct: 101 A 101
Score = 26.6 bits (56), Expect = 2.5
Identities = 10/35 (28%), Positives = 16/35 (45%)
Query: 36 KPYNCASCGKSFADRSNLRAHLQTHSSDKKYECSR 70
K Y C C K F+ L H H +++++ R
Sbjct: 78 KIYTCHFCKKGFSTSQALGGHQNAHKQEREWDKKR 112
>At2g17180.1 68415.m01984 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 270
Score = 29.9 bits (64), Expect = 0.27
Identities = 12/29 (41%), Positives = 15/29 (51%)
Query: 4 LTHRMGHICGVCGKHFSRPWLLRGHVRSH 32
L M H C +C + FS L GH+R H
Sbjct: 205 LVSGMNHRCNICSRVFSSGQALGGHMRCH 233
Score = 27.9 bits (59), Expect = 1.1
Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Query: 12 CGVCGKHFSRPWLLRGHVRSHTGEKPYNCASCGKSFADRSNLRAHLQTHSSDKKYE 67
C CGK F L GH+R H E+ + + +F R N A + S D E
Sbjct: 67 CTECGKQFGSLKALFGHMRCHP-ERQWRGINPPSNFKRRINSNAASSSSSWDPSEE 121
Score = 25.8 bits (54), Expect = 4.3
Identities = 12/35 (34%), Positives = 14/35 (40%)
Query: 30 RSHTGEKPYNCASCGKSFADRSNLRAHLQTHSSDK 64
RS E+ + C C K F L H TH K
Sbjct: 140 RSSEVEERFECDGCKKVFGSHQALGGHRATHKDVK 174
>At2g37430.1 68415.m04590 zinc finger (C2H2 type) family protein
(ZAT11) contains Pfam domain, PF00096: Zinc finger, C2H2
type
Length = 178
Score = 29.5 bits (63), Expect = 0.35
Identities = 24/94 (25%), Positives = 41/94 (43%), Gaps = 14/94 (14%)
Query: 2 HVLTHRMGHI-CGVCGKHFSRPWLLRGHVRSHTGEKPYNCASCGKSFADRSNLRAHLQTH 60
H +H C C K FS L GH SH +KP K ++ +++ +
Sbjct: 38 HTESHTSNQFECKTCNKRFSSFQALGGHRASH--KKP-------KLTVEQKDVKHLSNDY 88
Query: 61 SSDKKYECSRCHKSF----ALKSYLNKHQEAACV 90
+ ++CS C +SF AL ++ +H+ + V
Sbjct: 89 KGNHFHKCSICSQSFGTGQALGGHMRRHRSSMTV 122
Score = 25.4 bits (53), Expect = 5.7
Identities = 11/38 (28%), Positives = 17/38 (44%)
Query: 32 HTGEKPYNCASCGKSFADRSNLRAHLQTHSSDKKYECS 69
+ G + C+ C +SF L H++ H S E S
Sbjct: 88 YKGNHFHKCSICSQSFGTGQALGGHMRRHRSSMTVEPS 125
>At2g28710.1 68415.m03490 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 156
Score = 29.5 bits (63), Expect = 0.35
Identities = 11/25 (44%), Positives = 14/25 (56%)
Query: 10 HICGVCGKHFSRPWLLRGHVRSHTG 34
H C +CG F+ L GH+R H G
Sbjct: 78 HECPICGAEFAVGQALGGHMRKHRG 102
>At5g06070.1 68418.m00673 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 226
Score = 29.1 bits (62), Expect = 0.47
Identities = 9/29 (31%), Positives = 15/29 (51%)
Query: 36 KPYNCASCGKSFADRSNLRAHLQTHSSDK 64
+ Y+C+ CG+ F L H+ H D+
Sbjct: 53 RSYSCSFCGREFKSAQALGGHMNVHRRDR 81
>At2g28200.1 68415.m03424 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 284
Score = 29.1 bits (62), Expect = 0.47
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 10 HICGVCGKHFSRPWLLRGHVRSH 32
H C +CG F+ L GH+R H
Sbjct: 188 HECSICGSEFTSGQALGGHMRRH 210
>At1g67030.1 68414.m07622 zinc finger (C2H2 type) family protein
(ZFP6) identical to zinc finger protein, ZFP6
gi|790683|gb|AAA87302; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 197
Score = 29.1 bits (62), Expect = 0.47
Identities = 12/27 (44%), Positives = 14/27 (51%)
Query: 61 SSDKKYECSRCHKSFALKSYLNKHQEA 87
S +KYEC C + FA L HQ A
Sbjct: 36 SESRKYECQYCCREFANSQALGGHQNA 62
Score = 25.0 bits (52), Expect = 7.6
Identities = 9/35 (25%), Positives = 16/35 (45%)
Query: 31 SHTGEKPYNCASCGKSFADRSNLRAHLQTHSSDKK 65
S + + Y C C + FA+ L H H +++
Sbjct: 34 SGSESRKYECQYCCREFANSQALGGHQNAHKKERQ 68
>At5g03510.1 68418.m00307 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 292
Score = 28.7 bits (61), Expect = 0.62
Identities = 11/25 (44%), Positives = 13/25 (52%)
Query: 10 HICGVCGKHFSRPWLLRGHVRSHTG 34
H C +C FS L GH+R H G
Sbjct: 192 HECSICKAEFSSGQALGGHMRRHRG 216
Score = 25.0 bits (52), Expect = 7.6
Identities = 10/27 (37%), Positives = 12/27 (44%)
Query: 38 YNCASCGKSFADRSNLRAHLQTHSSDK 64
Y C +C KSF L H +H K
Sbjct: 118 YQCKTCDKSFHSFQALGGHRASHKKPK 144
>At5g59820.1 68418.m07500 zinc finger (C2H2 type) family protein
(ZAT12) identical to zinc finger protein ZAT12
[Arabidopsis thaliana] gi|1418325|emb|CAA67232
Length = 162
Score = 28.3 bits (60), Expect = 0.82
Identities = 11/26 (42%), Positives = 13/26 (50%)
Query: 10 HICGVCGKHFSRPWLLRGHVRSHTGE 35
H C +CG F L GH+R H E
Sbjct: 82 HPCPICGVEFPMGQALGGHMRRHRNE 107
>At4g35280.1 68417.m05013 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 284
Score = 28.3 bits (60), Expect = 0.82
Identities = 12/30 (40%), Positives = 16/30 (53%)
Query: 3 VLTHRMGHICGVCGKHFSRPWLLRGHVRSH 32
+LT H C +C + FS L GH+R H
Sbjct: 215 ILTFSGHHKCNICFRVFSSGQALGGHMRCH 244
>At3g60580.1 68416.m06777 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 288
Score = 28.3 bits (60), Expect = 0.82
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 38 YNCASCGKSFADRSNLRAHLQTHSSDKKYECSR 70
Y C C KSF + L H+++H S+ E R
Sbjct: 4 YKCRVCFKSFVNGKALGGHMRSHMSNSHEEEQR 36
Score = 27.5 bits (58), Expect = 1.4
Identities = 20/76 (26%), Positives = 31/76 (40%), Gaps = 5/76 (6%)
Query: 12 CGVCGKHFSRPWLLRGHVRSHTGEKPYNCASCGKSFADRSNLRAHLQTHSSDKKYECSRC 71
C CGK F L GH SH + N + +S + N+ + + +EC C
Sbjct: 175 CETCGKVFKSYQALGGHRASHKKNRVSNNKTEQRSETEYDNV-----VVVAKRIHECPIC 229
Query: 72 HKSFALKSYLNKHQEA 87
+ FA L H+ +
Sbjct: 230 LRVFASGQALGGHKRS 245
Score = 25.8 bits (54), Expect = 4.3
Identities = 9/27 (33%), Positives = 13/27 (48%)
Query: 38 YNCASCGKSFADRSNLRAHLQTHSSDK 64
Y C +CGK F L H +H ++
Sbjct: 173 YKCETCGKVFKSYQALGGHRASHKKNR 199
Score = 25.4 bits (53), Expect = 5.7
Identities = 11/21 (52%), Positives = 12/21 (57%)
Query: 12 CGVCGKHFSRPWLLRGHVRSH 32
C VC K F L GH+RSH
Sbjct: 6 CRVCFKSFVNGKALGGHMRSH 26
>At2g26940.1 68415.m03231 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 286
Score = 28.3 bits (60), Expect = 0.82
Identities = 12/26 (46%), Positives = 14/26 (53%)
Query: 10 HICGVCGKHFSRPWLLRGHVRSHTGE 35
H C +C K FS GHVR H+ E
Sbjct: 49 HFCVICEKQFSSGKAYGGHVRIHSIE 74
Score = 25.8 bits (54), Expect = 4.3
Identities = 10/21 (47%), Positives = 12/21 (57%)
Query: 12 CGVCGKHFSRPWLLRGHVRSH 32
C +CGK F L GH+R H
Sbjct: 121 CCLCGKEFQTMHSLFGHMRRH 141
>At5g54360.1 68418.m06769 zinc finger (C2H2 type) family
protein-related contains Prosite:PS00028: Zinc finger,
C2H2 type, domain.
Length = 270
Score = 27.9 bits (59), Expect = 1.1
Identities = 9/31 (29%), Positives = 18/31 (58%)
Query: 6 HRMGHICGVCGKHFSRPWLLRGHVRSHTGEK 36
+++ H C C ++F + L GH++ H E+
Sbjct: 77 NKISHTCRFCKRNFKSCFALGGHMKCHKKER 107
>At3g23140.1 68416.m02916 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 172
Score = 27.9 bits (59), Expect = 1.1
Identities = 16/61 (26%), Positives = 27/61 (44%)
Query: 6 HRMGHICGVCGKHFSRPWLLRGHVRSHTGEKPYNCASCGKSFADRSNLRAHLQTHSSDKK 65
+R + C +C + F+ P L GH H E+ +S S + +L Q+ SS
Sbjct: 17 NRRTYDCDICKRGFTNPQALGGHNNIHRRERERYPSSSSSSHSFPFSLPLPSQSPSSSTN 76
Query: 66 Y 66
+
Sbjct: 77 F 77
>At1g02030.1 68414.m00123 zinc finger (C2H2 type) family protein
identical to C2H2 zinc finger protein ZAT1 [Arabidopsis
thaliana] gi|1418321|emb|CAA67227; contains Pfam
domain, PF00096: Zinc finger, C2H2 type
Length = 267
Score = 27.9 bits (59), Expect = 1.1
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 10 HICGVCGKHFSRPWLLRGHVRSH 32
H C +C K F+ L GH+RSH
Sbjct: 5 HKCKLCWKSFANGRALGGHMRSH 27
Score = 27.5 bits (58), Expect = 1.4
Identities = 11/23 (47%), Positives = 13/23 (56%)
Query: 10 HICGVCGKHFSRPWLLRGHVRSH 32
H C +C K F+ L GH RSH
Sbjct: 209 HECPICAKVFTSGQALGGHKRSH 231
Score = 26.6 bits (56), Expect = 2.5
Identities = 10/26 (38%), Positives = 16/26 (61%)
Query: 35 EKPYNCASCGKSFADRSNLRAHLQTH 60
E+ + C C KSFA+ L H+++H
Sbjct: 2 EERHKCKLCWKSFANGRALGGHMRSH 27
>At4g35700.1 68417.m05067 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 275
Score = 27.5 bits (58), Expect = 1.4
Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query: 31 SHTGEKPYNCASCGKSFADRSNLRAHLQTHSSDKKY 66
+H + P C CGK FA + HL+ H D+ Y
Sbjct: 135 THLPQGPPMCNVCGKGFASWKAVFGHLRQH-KDRGY 169
Score = 26.6 bits (56), Expect = 2.5
Identities = 10/22 (45%), Positives = 14/22 (63%)
Query: 11 ICGVCGKHFSRPWLLRGHVRSH 32
+C VCGK F+ + GH+R H
Sbjct: 143 MCNVCGKGFASWKAVFGHLRQH 164
>At4g04404.1 68417.m00636 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 230
Score = 27.5 bits (58), Expect = 1.4
Identities = 12/29 (41%), Positives = 14/29 (48%)
Query: 4 LTHRMGHICGVCGKHFSRPWLLRGHVRSH 32
L + H C +CGK F L GH R H
Sbjct: 85 LQSKSSHRCQICGKSFECYQALGGHRRLH 113
>At1g68360.1 68414.m07808 zinc finger protein-related similar to
zinc finger protein GI:790683 from [Arabidopsis
thaliana]
Length = 244
Score = 27.5 bits (58), Expect = 1.4
Identities = 9/32 (28%), Positives = 15/32 (46%)
Query: 34 GEKPYNCASCGKSFADRSNLRAHLQTHSSDKK 65
GE+ Y C C + F + L H H +++
Sbjct: 69 GERKYECQYCCREFGNSQALGGHQNAHKKERQ 100
Score = 26.6 bits (56), Expect = 2.5
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 63 DKKYECSRCHKSFALKSYLNKHQEA 87
++KYEC C + F L HQ A
Sbjct: 70 ERKYECQYCCREFGNSQALGGHQNA 94
>At5g44150.1 68418.m05403 expressed protein
Length = 355
Score = 27.1 bits (57), Expect = 1.9
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 24 LLRGHVRSHTGEKPYNCASCGKSFADRSNLRAHLQTHSSDKKY 66
LL +HT P AS GKS A + L + L++HSS +++
Sbjct: 261 LLNSFSEAHTQPNPVASAS-GKSSAFETELDSLLKSHSSTEQF 302
>At4g25610.1 68417.m03689 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 586
Score = 27.1 bits (57), Expect = 1.9
Identities = 13/44 (29%), Positives = 19/44 (43%)
Query: 40 CASCGKSFADRSNLRAHLQTHSSDKKYECSRCHKSFALKSYLNK 83
C C + F N R H + H +K E + AL ++ NK
Sbjct: 63 CEKCSREFCSPVNFRRHNRMHRRQRKPEKDFGKERDALGAFWNK 106
>At4g22410.1 68417.m03238 ubiquitin carboxyl-terminal hydrolase
family protein similar to U4/U6.U5 tri-snRNP-associated
65 kDa protein [Homo sapiens] GI:13926071; contains
Pfam profile PF00443: Ubiquitin carboxyl-terminal
hydrolase
Length = 340
Score = 27.1 bits (57), Expect = 1.9
Identities = 12/24 (50%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
Query: 38 YNCASCGKSFADRSNLRAHLQTHS 61
Y C CGK F RS ++H THS
Sbjct: 25 YACLVCGKYFQGRSQ-KSHAYTHS 47
>At4g22350.1 68417.m03231 ubiquitin carboxyl-terminal hydrolase
family protein similar to U4/U6.U5 tri-snRNP-associated
65 kDa protein [Homo sapiens] GI:13926071; contains Pfam
profile PF00443: Ubiquitin carboxyl-terminal hydrolase
Length = 510
Score = 27.1 bits (57), Expect = 1.9
Identities = 12/24 (50%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
Query: 38 YNCASCGKSFADRSNLRAHLQTHS 61
Y C CGK F RS ++H THS
Sbjct: 109 YACLVCGKYFQGRSQ-KSHAYTHS 131
>At4g22290.1 68417.m03224 ubiquitin carboxyl-terminal hydrolase
family protein similar to pVHL-interacting
deubiquitinating enzyme 1 type II [Homo sapiens]
GI:18698435; contains Pfam profile PF00443: Ubiquitin
carboxyl-terminal hydrolase
Length = 974
Score = 27.1 bits (57), Expect = 1.9
Identities = 12/24 (50%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
Query: 38 YNCASCGKSFADRSNLRAHLQTHS 61
Y C CGK F RS ++H THS
Sbjct: 571 YACLVCGKYFQGRSQ-KSHAYTHS 593
>At1g26610.1 68414.m03241 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 455
Score = 27.1 bits (57), Expect = 1.9
Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 3/40 (7%)
Query: 11 ICGVCGKHFSRPWLLRGHVRSHTGEKPYNCASCGKSFADR 50
+C C K F L GH+R+H E N A + AD+
Sbjct: 10 VCKFCSKRFPCGKSLGGHIRTHMNE---NSADSDEDEADK 46
Score = 27.1 bits (57), Expect = 1.9
Identities = 11/24 (45%), Positives = 13/24 (54%)
Query: 9 GHICGVCGKHFSRPWLLRGHVRSH 32
GH C +C + F L GH RSH
Sbjct: 398 GHECPICFRVFKSGQALGGHKRSH 421
Score = 26.6 bits (56), Expect = 2.5
Identities = 10/26 (38%), Positives = 12/26 (46%)
Query: 40 CASCGKSFADRSNLRAHLQTHSSDKK 65
C CGK F L H+ HS +K
Sbjct: 95 CRECGKGFVSSKALCGHMACHSEREK 120
Score = 25.8 bits (54), Expect = 4.3
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 35 EKPYNCASCGKSFADRSNLRAHLQTHSSD 63
E+ + C C K F +L H++TH ++
Sbjct: 6 ERKFVCKFCSKRFPCGKSLGGHIRTHMNE 34
>At5g63280.1 68418.m07942 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 271
Score = 26.6 bits (56), Expect = 2.5
Identities = 10/29 (34%), Positives = 17/29 (58%)
Query: 56 HLQTHSSDKKYECSRCHKSFALKSYLNKH 84
H + H +++C C KSF + +L+KH
Sbjct: 95 HHKVHVDVFEWKCGYCKKSFNDEKFLDKH 123
Score = 25.0 bits (52), Expect = 7.6
Identities = 11/32 (34%), Positives = 13/32 (40%)
Query: 28 HVRSHTGEKPYNCASCGKSFADRSNLRAHLQT 59
H + H + C C KSF D L H T
Sbjct: 95 HHKVHVDVFEWKCGYCKKSFNDEKFLDKHFST 126
>At5g42640.1 68418.m05191 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 300
Score = 26.6 bits (56), Expect = 2.5
Identities = 11/39 (28%), Positives = 17/39 (43%)
Query: 26 RGHVRSHTGEKPYNCASCGKSFADRSNLRAHLQTHSSDK 64
R H +T PY C C F AH+ +H +++
Sbjct: 231 RTHSLPYTKYGPYTCPRCNGVFDTSQKFAAHMLSHYNNE 269
>At5g25560.1 68418.m03041 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 308
Score = 26.6 bits (56), Expect = 2.5
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 4/34 (11%)
Query: 12 CGVC-GKHFSRPWLLRGHVRSHTGEKPYNCASCG 44
CGVC GK+F + L T +K Y+C CG
Sbjct: 130 CGVCMGKYFCKVCKLYD---DDTSKKQYHCDGCG 160
>At4g16610.1 68417.m02512 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 204
Score = 26.6 bits (56), Expect = 2.5
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 10 HICGVCGKHFSRPWLLRGHVRSH 32
H C +C K F L GH++SH
Sbjct: 5 HKCKLCSKSFCNGRALGGHMKSH 27
>At1g13290.1 68414.m01543 zinc finger (C2H2 type) family protein
contains Pfam domian PF00096: Zinc finger, C2H2 type
Length = 302
Score = 26.6 bits (56), Expect = 2.5
Identities = 9/29 (31%), Positives = 17/29 (58%)
Query: 34 GEKPYNCASCGKSFADRSNLRAHLQTHSS 62
G ++C+ C K+F +N++ H+ H S
Sbjct: 97 GPTQFSCSVCNKTFNRFNNMQMHMWGHGS 125
>At5g22920.1 68418.m02680 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profiles:PF05495 CHY zinc
finger, PF00097 zinc finger, C3HC4 type (RING finger)
Length = 291
Score = 26.2 bits (55), Expect = 3.3
Identities = 18/63 (28%), Positives = 27/63 (42%), Gaps = 11/63 (17%)
Query: 38 YNCASCGKSFADRSNLRAHLQ----THSSDKKYE-------CSRCHKSFALKSYLNKHQE 86
Y C C KS D SNL L + K YE C+ C + ++ +L H+
Sbjct: 200 YTCPVCSKSICDMSNLWKKLDEEVAAYPMPKMYENKMVWILCNDCGSNTNVRFHLIAHKC 259
Query: 87 AAC 89
++C
Sbjct: 260 SSC 262
>At3g48030.1 68416.m05236 hypoxia-responsive family protein / zinc
finger (C3HC4-type RING finger) family protein similar
to RING-H2 finger protein RHX1a [Arabidopsis thaliana]
GI:3790591; contains Pfam profiles PF00097: Zinc finger
C3HC4 type (RING finger), PF04588: Hypoxia induced
protein conserved region
Length = 349
Score = 26.2 bits (55), Expect = 3.3
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 22 PWLLRGHVRSHTGEKPYNCASCGKSFADRSNLR 54
P L G+V E+P++CA C F+D LR
Sbjct: 190 PVFLYGNVTISL-EQPFDCAVCLNEFSDTDKLR 221
>At3g01460.1 68416.m00070 PHD finger family protein / methyl-CpG
binding domain-containing protein contains Pfam profiles
PF00628: PHD-finger (2 copies), PF01429: Methyl-CpG
binding domain
Length = 2176
Score = 26.2 bits (55), Expect = 3.3
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 68 CSRCHKSFALKSYLNKHQEAACV 90
C CHK+FA H E+ C+
Sbjct: 1806 CLICHKTFASDDEFEDHTESKCI 1828
>At5g40710.1 68418.m04941 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 272
Score = 25.8 bits (54), Expect = 4.3
Identities = 17/74 (22%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
Query: 15 CGKHFSR-PW-LLRGHVRSHTGEKPYNCASCGKSFADRSNLRAHLQ--THSSDKKYECSR 70
C + SR W +++ ++ + ++ Y S + D R + S ++ C
Sbjct: 52 CSRERSRVAWKIIQEYLMPYVEKERYQLPSTCRVHRDNDIYREQEEHKLRSDINEWRCGF 111
Query: 71 CHKSFALKSYLNKH 84
C K+F + YL+KH
Sbjct: 112 CKKAFYEEKYLDKH 125
>At3g58070.1 68416.m06473 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 253
Score = 25.8 bits (54), Expect = 4.3
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 61 SSDKKYECSRCHKSFALKSYLNKHQEA 87
S ++++EC C ++F L HQ A
Sbjct: 86 SHNRRFECHYCFRNFPTSQALGGHQNA 112
>At2g41940.1 68415.m05188 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 257
Score = 25.8 bits (54), Expect = 4.3
Identities = 8/28 (28%), Positives = 17/28 (60%)
Query: 60 HSSDKKYECSRCHKSFALKSYLNKHQEA 87
+++++++EC C ++F L HQ A
Sbjct: 89 NNNNRRFECHYCFRNFPTSQALGGHQNA 116
>At2g21850.1 68415.m02596 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 772
Score = 25.8 bits (54), Expect = 4.3
Identities = 11/33 (33%), Positives = 14/33 (42%)
Query: 61 SSDKKYECSRCHKSFALKSYLNKHQEAACVRSD 93
SS+ Y C C K F LK ++ A D
Sbjct: 665 SSNVLYSCKHCGKEFHLKCIMSTDDREAATEED 697
>At2g15740.1 68415.m01802 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 329
Score = 25.8 bits (54), Expect = 4.3
Identities = 11/42 (26%), Positives = 16/42 (38%)
Query: 26 RGHVRSHTGEKPYNCASCGKSFADRSNLRAHLQTHSSDKKYE 67
R H + PY C C F AH+ +H ++ E
Sbjct: 232 RTHSLPYEKYGPYTCPKCNGVFNTSQKFAAHMSSHYKNETSE 273
>At5g06650.1 68418.m00751 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 191
Score = 25.4 bits (53), Expect = 5.7
Identities = 8/31 (25%), Positives = 17/31 (54%)
Query: 57 LQTHSSDKKYECSRCHKSFALKSYLNKHQEA 87
++ + +K+++C C ++F L HQ A
Sbjct: 46 IKDDNKEKRFKCHYCFRNFPTSQALGGHQNA 76
>At3g01030.1 68416.m00004 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 353
Score = 25.4 bits (53), Expect = 5.7
Identities = 15/45 (33%), Positives = 18/45 (40%), Gaps = 1/45 (2%)
Query: 40 CASCGKSFADRSNLRAHLQ-THSSDKKYECSRCHKSFALKSYLNK 83
C CGK F L HLQ THS + C S + +K
Sbjct: 80 CKECGKGFLYEKCLFNHLQVTHSEESTRRSLFCRFSIVQRRKRSK 124
Score = 25.0 bits (52), Expect = 7.6
Identities = 11/23 (47%), Positives = 12/23 (52%)
Query: 10 HICGVCGKHFSRPWLLRGHVRSH 32
H CG+C K FS L GH H
Sbjct: 284 HRCGLCHKVFSTYQTLGGHQTFH 306
>At2g45120.1 68415.m05615 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 314
Score = 25.4 bits (53), Expect = 5.7
Identities = 15/57 (26%), Positives = 23/57 (40%), Gaps = 2/57 (3%)
Query: 38 YNCASCGKSFADRSNLRAHLQTHSSDKKYECSRCHKSFALKSYLNKHQEAACVRSDD 94
Y C C KSF + L H+++H E RC + + + + C DD
Sbjct: 4 YKCRFCFKSFINGRALGGHMRSHMLTLSAE--RCVITGEAEEEVEERPSQLCDDDDD 58
Score = 25.4 bits (53), Expect = 5.7
Identities = 9/27 (33%), Positives = 13/27 (48%)
Query: 38 YNCASCGKSFADRSNLRAHLQTHSSDK 64
+ C +CGK F L H +H +K
Sbjct: 194 FKCETCGKVFKSYQALGGHRASHKKNK 220
Score = 25.0 bits (52), Expect = 7.6
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 10 HICGVCGKHFSRPWLLRGHVRSH 32
H C +C + F+ L GH RSH
Sbjct: 243 HECPICFRVFTSGQALGGHKRSH 265
>At2g18490.1 68415.m02155 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 251
Score = 25.4 bits (53), Expect = 5.7
Identities = 8/24 (33%), Positives = 10/24 (41%)
Query: 37 PYNCASCGKSFADRSNLRAHLQTH 60
PY C C F AH+ +H
Sbjct: 168 PYTCPKCNSIFDTSQKFAAHMSSH 191
>At1g77300.1 68414.m09002 SET domain-containing protein similar to
huntingtin interacting protein 1 [Homo sapiens]
GI:12697196; contains Pfam profile PF00856: SET domain
Length = 1759
Score = 25.4 bits (53), Expect = 5.7
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 17 KHFSRPWLLRGHVRSHTGEKPYN 39
KHF +PW + RS + P N
Sbjct: 1484 KHFRKPWRINREERSESMRSPIN 1506
>At1g65920.1 68414.m07480 regulator of chromosome condensation
(RCC1) family protein / zinc finger protein-related
contains Pfam profiles: regulator of chromosome
condensation (RCC1), PF01363 FYVE zinc finger
Length = 1006
Score = 25.4 bits (53), Expect = 5.7
Identities = 11/26 (42%), Positives = 12/26 (46%)
Query: 22 PWLLRGHVRSHTGEKPYNCASCGKSF 47
PW V + K YN SCGK F
Sbjct: 456 PWHTAAIVETANDRKFYNAKSCGKLF 481
>At1g30970.1 68414.m03792 zinc finger (C2H2 type) family protein
contains Pfam domain PF00096: Zinc finger, C2H2 type
Length = 367
Score = 25.4 bits (53), Expect = 5.7
Identities = 16/58 (27%), Positives = 24/58 (41%), Gaps = 5/58 (8%)
Query: 27 GHVRSHTGEKPYNCASCGKSFADRSNLRAHLQTHSSDKKYECSRCHKSFALKSYLNKH 84
G + EK + C C + F D L H + K ++C CHK + S + H
Sbjct: 2 GKKKKRATEKVW-CYYCDREFDDEKILVQHQKA----KHFKCHVCHKKLSTASGMVIH 54
>At5g54340.1 68418.m06767 zinc finger (C2H2 type) protein-related
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 244
Score = 25.0 bits (52), Expect = 7.6
Identities = 13/47 (27%), Positives = 19/47 (40%)
Query: 36 KPYNCASCGKSFADRSNLRAHLQTHSSDKKYECSRCHKSFALKSYLN 82
K Y C C ++F L H TH D++ E + + K N
Sbjct: 45 KIYICYLCKRAFPTPHALGGHGTTHKEDRELERQQIESRLSNKDKSN 91
>At5g52010.1 68418.m06454 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 396
Score = 25.0 bits (52), Expect = 7.6
Identities = 10/35 (28%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 37 PYNCASCGKSFADRSNLRAHL-QTHSSDKKYECSR 70
PY C CG+ +L+ H Q H +++ + +R
Sbjct: 151 PYICGVCGRKCKTNLDLKKHFKQLHERERQKKVNR 185
>At5g25160.1 68418.m02983 zinc finger (C2H2 type) family protein
(ZFP3) identical to zinc finger protein, ZFP3
gi|790677|gb|AAA87299; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 235
Score = 25.0 bits (52), Expect = 7.6
Identities = 13/56 (23%), Positives = 21/56 (37%), Gaps = 3/56 (5%)
Query: 32 HTGEKPYNCASCGKSFADRSNLRAHLQTHSSDKKYECSRCHKSFALKSYLNKHQEA 87
H N C D +++ T + K + C+ C ++F L HQ A
Sbjct: 30 HNSSHELNLIDC---IDDTTSIVNESTTSTEQKLFSCNYCQRTFYSSQALGGHQNA 82
>At4g35610.1 68417.m05058 zinc finger (C2H2 type) family protein
contains Pfam domain PF00096: Zinc finger, C2H2 type
Length = 271
Score = 25.0 bits (52), Expect = 7.6
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 11 ICGVCGKHFSRPWLLRGHVRSH 32
+C +CG+ F + GH+R+H
Sbjct: 139 VCHICGRGFGSWKAVFGHMRAH 160
>At3g53600.1 68416.m05920 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 175
Score = 25.0 bits (52), Expect = 7.6
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 10 HICGVCGKHFSRPWLLRGHVRSH 32
H C +C + F L GH+R H
Sbjct: 93 HKCTICDQMFGTGQALGGHMRKH 115
>At2g36480.1 68415.m04477 zinc finger (C2H2-type) family protein
weak similarity to S-locus protein 4 (GI:6069478)
[Brassica rapa]; weak similarity to Pre-mRNA cleavage
complex II protein Pcf11 (Fragment) (Swiss-Prot:O94913)
[Homo sapiens]; contains Prosite PS00028: Zinc finger,
C2H2 type, domain
Length = 828
Score = 25.0 bits (52), Expect = 7.6
Identities = 11/33 (33%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Query: 37 PYNCASCGKSFADRSNLRAHLQTHSSDKKYECS 69
P+ C SC + L H++ H KK E S
Sbjct: 678 PHLCTSCSVRLKQKEELDRHMELHDK-KKLELS 709
>At1g02040.1 68414.m00124 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 324
Score = 25.0 bits (52), Expect = 7.6
Identities = 12/32 (37%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Query: 2 HVLTHRMG-HICGVCGKHFSRPWLLRGHVRSH 32
H+ R H C +C + FS L GH R H
Sbjct: 216 HIARKRSNAHECTICHRVFSSGQALGGHKRCH 247
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.323 0.132 0.443
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,513,595
Number of Sequences: 28952
Number of extensions: 92192
Number of successful extensions: 639
Number of sequences better than 10.0: 100
Number of HSP's better than 10.0 without gapping: 86
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 299
Number of HSP's gapped (non-prelim): 292
length of query: 95
length of database: 12,070,560
effective HSP length: 69
effective length of query: 26
effective length of database: 10,072,872
effective search space: 261894672
effective search space used: 261894672
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 52 (25.0 bits)
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