Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000604-TA|BGIBMGA000604-PA|IPR007087|Zinc finger,
C2H2-type
(272 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyce... 69 7e-13
SPAC144.09c |sfc2||RNA polymerase III transcription factor TFIII... 63 4e-11
SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyce... 58 1e-09
SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal binuc... 56 7e-09
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ... 54 2e-08
SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyce... 49 8e-07
SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces... 49 8e-07
SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces pom... 46 6e-06
SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces... 45 1e-05
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 43 4e-05
SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|ch... 40 4e-04
SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr... 39 7e-04
SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces... 34 0.025
SPAC2F7.05c |||translation initiation factor eIF5 |Schizosacchar... 30 0.41
SPAC4G9.09c |arg11||N-acetyl-gamma-glutamyl-phosphate reductase/... 29 0.94
SPBC3F6.05 |rga1||GTPase activating protein Rga1|Schizosaccharom... 29 0.94
SPAC1B1.01 |||transcription factor Rdp1|Schizosaccharomyces pomb... 29 0.94
SPBC651.08c |rpc1||DNA-directed RNA polymerase III complex large... 27 2.2
SPAC17G6.08 |pep7|vac1|prevacuole/endosomal FYVE tethering compo... 27 2.2
SPBC16G5.17 |||transcription factor, zf-fungal binuclear cluster... 27 2.2
SPBP8B7.15c |||ubiquitin-protein ligase E3 RBBP6 family |Schizos... 26 5.0
SPCC1682.07 |ssl1||transcription factor TFIIH complex subunit Ss... 26 6.7
>SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 681
Score = 68.9 bits (161), Expect = 7e-13
Identities = 27/73 (36%), Positives = 44/73 (60%)
Query: 192 CGKHFSRPWLLRGHVRSHTGEKPYNCASCGKSFADRSNLRAHLQTHSSDKKYECSRCHKS 251
C K F+R + L+ H+ +HT +P+ C+ C KSFA + + R H Q H+ K + C C++
Sbjct: 577 CNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQHDKRRHEQLHTGIKAFACVTCNQR 636
Query: 252 FALKSYLNKHQEA 264
FA LN+H ++
Sbjct: 637 FARMDALNRHYKS 649
Score = 45.6 bits (103), Expect = 8e-06
Identities = 17/46 (36%), Positives = 29/46 (63%)
Query: 218 ASCGKSFADRSNLRAHLQTHSSDKKYECSRCHKSFALKSYLNKHQE 263
A C K F NL++H+ TH++ + ++CS C KSFA + +H++
Sbjct: 575 AGCNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQHDKRRHEQ 620
Score = 44.4 bits (100), Expect = 2e-05
Identities = 23/73 (31%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
Query: 166 CGKAYVSMPALAMHVLTHR--MGHICGVCGKHFSRPWLLRGHVRSHTGEKPYNCASCGKS 223
C K + L H+ TH C +C K F+R R H + HTG K + C +C +
Sbjct: 577 CNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQHDKRRHEQLHTGIKAFACVTCNQR 636
Query: 224 FADRSNLRAHLQT 236
FA L H ++
Sbjct: 637 FARMDALNRHYKS 649
Score = 36.3 bits (80), Expect = 0.005
Identities = 21/80 (26%), Positives = 31/80 (38%), Gaps = 5/80 (6%)
Query: 135 CGKRYATSSNLSRHKQTHRSLDSVAAKRCPECGKAYVSMPALAMHVLTHR--MGHICGVC 192
C KR+ + NL H TH + +C C K++ H H C C
Sbjct: 577 CNKRFTRAYNLKSHMNTHTNYRPF---QCSICKKSFARQHDKRRHEQLHTGIKAFACVTC 633
Query: 193 GKHFSRPWLLRGHVRSHTGE 212
+ F+R L H +S G+
Sbjct: 634 NQRFARMDALNRHYKSEVGQ 653
Score = 33.5 bits (73), Expect = 0.033
Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Query: 130 YDCNECGKRYATSSNLSRHKQTHRSLDSVAAKRCPECGKAYVSMPALAMH 179
+ C+ C K +A + RH+Q H + + A C C + + M AL H
Sbjct: 600 FQCSICKKSFARQHDKRRHEQLHTGIKAFA---CVTCNQRFARMDALNRH 646
>SPAC144.09c |sfc2||RNA polymerase III transcription factor
TFIIIA|Schizosaccharomyces pombe|chr 1|||Manual
Length = 374
Score = 63.3 bits (147), Expect = 4e-11
Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 4/76 (5%)
Query: 192 CGKHFSRPWLLRGHVRSHTGEKPYNC--ASCGKSFADRSNLRAHLQTHSSDKKYEC--SR 247
CGK +SRP LL H+R+H+ E+P+ C C K+F +S+L+ H + H++ K + C
Sbjct: 30 CGKKYSRPSLLEQHLRTHSNERPFVCDYTGCSKAFYRKSHLKIHKRCHTNVKPFSCHYDG 89
Query: 248 CHKSFALKSYLNKHQE 263
C F + +L +H E
Sbjct: 90 CDAQFYTQQHLERHIE 105
Score = 58.4 bits (135), Expect = 1e-09
Identities = 43/149 (28%), Positives = 62/149 (41%), Gaps = 20/149 (13%)
Query: 130 YDCN--ECGKRYATSSNLSRHKQTHRSLDSVAAKRCPE--C--GKAYVSMPALAMHVLTH 183
Y C +C R+AT L H +R+ + + + CP C + + L H+
Sbjct: 144 YPCTYQDCELRFATKQKLQNH--VNRAHEKIISYSCPHESCVGHEGFEKWSQLQNHI--- 198
Query: 184 RMGHI--CGVCGKHFSRPWLLRGHVRSHTG----EKPYNCA--SCGKSFADRSNLRAHLQ 235
R H+ C +CG+ F LR HV H K Y+C C KSF S L+ H+
Sbjct: 199 REAHVPSCSICGRQFKTAAHLRHHVVLHQTTLEERKTYHCPMEGCKKSFTRSSALKKHIS 258
Query: 236 T-HSSDKKYECSRCHKSFALKSYLNKHQE 263
H + + C C F K L +H E
Sbjct: 259 VIHEGNMAFHCDSCGTKFGYKHMLQRHLE 287
Score = 56.0 bits (129), Expect = 5e-09
Identities = 43/142 (30%), Positives = 57/142 (40%), Gaps = 12/142 (8%)
Query: 134 ECGKRYATSSNLSRHKQTHRSLDSVAAKRCPECGKAYVSMPALAMHVLTHR-----MGHI 188
ECGK+Y+ S L +H +TH S + C KA+ L +H H H
Sbjct: 29 ECGKKYSRPSLLEQHLRTH-SNERPFVCDYTGCSKAFYRKSHLKIHKRCHTNVKPFSCHY 87
Query: 189 CGVCGKHFSRPWLLRGHVRSHTGEKPYNCA--SCGKSFADRSNLRAHLQT-HSSDKKYEC 245
G C F L H+ H KPY C C + F+ LR+H+ H+ Y C
Sbjct: 88 DG-CDAQFYTQQHLERHIEVHRKPKPYACTWEGCDECFSKHQQLRSHISACHTHLLPYPC 146
Query: 246 S--RCHKSFALKSYLNKHQEAA 265
+ C FA K L H A
Sbjct: 147 TYQDCELRFATKQKLQNHVNRA 168
Score = 48.0 bits (109), Expect = 1e-06
Identities = 42/151 (27%), Positives = 61/151 (40%), Gaps = 13/151 (8%)
Query: 131 DCNECGKRYATSSNLSRHKQTHRSLDSVAAKRCPECGKAYVSMPALAMHVLTHR--MGHI 188
D C K + S+L HK+ H ++ + C + + L H+ HR +
Sbjct: 56 DYTGCSKAFYRKSHLKIHKRCHTNVKPFSC-HYDGCDAQFYTQQHLERHIEVHRKPKPYA 114
Query: 189 C--GVCGKHFSRPWLLRGHVRS-HTGEKPYNCA--SCGKSFADRSNLRAHL-QTHSSDKK 242
C C + FS+ LR H+ + HT PY C C FA + L+ H+ + H
Sbjct: 115 CTWEGCDECFSKHQQLRSHISACHTHLLPYPCTYQDCELRFATKQKLQNHVNRAHEKIIS 174
Query: 243 YEC--SRC--HKSFALKSYLNKHQEAACVRS 269
Y C C H+ F S L H A V S
Sbjct: 175 YSCPHESCVGHEGFEKWSQLQNHIREAHVPS 205
Score = 43.2 bits (97), Expect = 4e-05
Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 9/91 (9%)
Query: 163 CPECGKAYVSMPALAMHVLTH------RMGHICGV--CGKHFSRPWLLRGHVRS-HTGEK 213
C CG+ + + L HV+ H R + C + C K F+R L+ H+ H G
Sbjct: 206 CSICGRQFKTAAHLRHHVVLHQTTLEERKTYHCPMEGCKKSFTRSSALKKHISVIHEGNM 265
Query: 214 PYNCASCGKSFADRSNLRAHLQTHSSDKKYE 244
++C SCG F + L+ HL+ + K ++
Sbjct: 266 AFHCDSCGTKFGYKHMLQRHLERGTCKKAHK 296
>SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 58.0 bits (134), Expect = 1e-09
Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 192 CGKHFSRPWLLRGHVRSHTGEKPYNCASCGKSFADRSNLRAHLQTHSSDKKYECSRCHKS 251
C K +R + + H+++H ++PY C C F +L+ HL+ H + + Y C C K
Sbjct: 450 CNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIHENGRPYVC-ECLKR 508
Query: 252 FALKSYLNKH-QEAACVRSDD 271
F LN+H Q CV D
Sbjct: 509 FNRLDALNRHKQRNICVGGVD 529
Score = 38.3 bits (85), Expect = 0.001
Identities = 29/81 (35%), Positives = 35/81 (43%), Gaps = 8/81 (9%)
Query: 129 KYDC--NECGKRYATSSNLSRHKQTHRSLDSVAAKRCPECGKAYVSMPALAMHVLTHRMG 186
KY C N C KR A N+ H QTH S RC C +V L H+ H G
Sbjct: 442 KYVCLYNGCNKRIARKYNVESHIQTHL---SDRPYRCDLCKAGFVRHHDLKRHLRIHENG 498
Query: 187 --HICGVCGKHFSRPWLLRGH 205
++C C K F+R L H
Sbjct: 499 RPYVC-ECLKRFNRLDALNRH 518
Score = 34.3 bits (75), Expect = 0.019
Identities = 22/72 (30%), Positives = 29/72 (40%), Gaps = 3/72 (4%)
Query: 166 CGKAYVSMPALAMHVLTHRMG--HICGVCGKHFSRPWLLRGHVRSHTGEKPYNCASCGKS 223
C K + H+ TH + C +C F R L+ H+R H +PY C C K
Sbjct: 450 CNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIHENGRPYVC-ECLKR 508
Query: 224 FADRSNLRAHLQ 235
F L H Q
Sbjct: 509 FNRLDALNRHKQ 520
>SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal
binuclear cluster type |Schizosaccharomyces pombe|chr
1|||Manual
Length = 522
Score = 55.6 bits (128), Expect = 7e-09
Identities = 26/51 (50%), Positives = 33/51 (64%), Gaps = 2/51 (3%)
Query: 189 CGVCGKHFSRPWLLRGHVRSHTGEKPYNC--ASCGKSFADRSNLRAHLQTH 237
C C + FSRP L+ H SHTGE+P+ C A CGK+F RSN+R H + H
Sbjct: 470 CTECLQGFSRPSSLKIHTYSHTGERPFVCDYAGCGKAFNVRSNMRRHQRIH 520
Score = 27.1 bits (57), Expect = 2.9
Identities = 18/65 (27%), Positives = 26/65 (40%), Gaps = 2/65 (3%)
Query: 120 SPSTKDKA-AKYDCNECGKRYATSSNLSRHKQTHRSLDSVAAKRCPECGKAYVSMPALAM 178
S ST A +Y C EC + ++ S+L H +H CGKA+ +
Sbjct: 457 SSSTSSAANVRYRCTECLQGFSRPSSLKIHTYSHTGERPFVCDYA-GCGKAFNVRSNMRR 515
Query: 179 HVLTH 183
H H
Sbjct: 516 HQRIH 520
>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 582
Score = 54.0 bits (124), Expect = 2e-08
Identities = 26/51 (50%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Query: 188 ICGVCGKHFSRPWLLRGHVRS-HTGEKPYNCASCGKSFADRSNLRAHLQTH 237
+C C K F R LR H+RS HT EKP+ C CGK F+ R NLR H + H
Sbjct: 424 VCPECSKKFKRSEHLRRHIRSLHTSEKPFVCI-CGKRFSRRDNLRQHERLH 473
Score = 39.9 bits (89), Expect = 4e-04
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 211 GEKPYNCASCGKSFADRSNLRAHLQT-HSSDKKYECSRCHKSFALKSYLNKHQ 262
G K + C C K F +LR H+++ H+S+K + C C K F+ + L +H+
Sbjct: 419 GGKSFVCPECSKKFKRSEHLRRHIRSLHTSEKPFVCI-CGKRFSRRDNLRQHE 470
Score = 38.7 bits (86), Expect = 9e-04
Identities = 21/55 (38%), Positives = 25/55 (45%), Gaps = 4/55 (7%)
Query: 163 CPECGKAYVSMPALAMHVL---THRMGHICGVCGKHFSRPWLLRGHVRSHTGEKP 214
CPEC K + L H+ T +C +CGK FSR LR H R H P
Sbjct: 425 CPECSKKFKRSEHLRRHIRSLHTSEKPFVC-ICGKRFSRRDNLRQHERLHVNASP 478
Score = 29.9 bits (64), Expect = 0.41
Identities = 21/66 (31%), Positives = 28/66 (42%), Gaps = 7/66 (10%)
Query: 118 PQSPSTKDKAAKYDCNECGKRYATSSNLSRHKQTHRSLDSVAAKRCPECGKAYVSMPALA 177
P+SP K + C EC K++ S +L RH RSL + CGK + L
Sbjct: 415 PRSPGGKS----FVCPECSKKFKRSEHLRRH---IRSLHTSEKPFVCICGKRFSRRDNLR 467
Query: 178 MHVLTH 183
H H
Sbjct: 468 QHERLH 473
>SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 428
Score = 48.8 bits (111), Expect = 8e-07
Identities = 23/51 (45%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 189 CGVCGKHFSRPWLLRGHVRSHTGEKPYNCA--SCGKSFADRSNLRAHLQTH 237
C C + F R H+RSHTGEKP+ C+ SC K F R L H++TH
Sbjct: 6 CPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVRTH 56
Score = 37.5 bits (83), Expect = 0.002
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Query: 213 KPYNCASCGKSFADRSNLRAHLQTHSSDKKYECS--RCHKSFALKSYLNKH 261
K Y C C + F + + H+++H+ +K +ECS C K F + L +H
Sbjct: 2 KSYECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRH 52
Score = 27.1 bits (57), Expect = 2.9
Identities = 14/54 (25%), Positives = 21/54 (38%), Gaps = 1/54 (1%)
Query: 130 YDCNECGKRYATSSNLSRHKQTHRSLDSVAAKRCPECGKAYVSMPALAMHVLTH 183
Y+C C + + + RH ++H P C K + L HV TH
Sbjct: 4 YECPFCKRVFHRQEHQVRHIRSHTGEKPFECSY-PSCKKRFTRRDELIRHVRTH 56
>SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 897
Score = 48.8 bits (111), Expect = 8e-07
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 202 LRGHVRSHT-GEKPYNCA--SCGKSFADRSNLRAHLQTHSSDKKYECSRCHKSFALKSYL 258
L+ R+H G+ + C C KSF + +LR H +TH + K + CS C+++FA L
Sbjct: 12 LKKRSRAHRLGDPRFYCTYPDCPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFARSDVL 71
Query: 259 NKH 261
N+H
Sbjct: 72 NRH 74
Score = 39.9 bits (89), Expect = 4e-04
Identities = 17/44 (38%), Positives = 25/44 (56%)
Query: 192 CGKHFSRPWLLRGHVRSHTGEKPYNCASCGKSFADRSNLRAHLQ 235
C K F+R LR H R+H K ++C+ C ++FA L H+Q
Sbjct: 33 CPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFARSDVLNRHVQ 76
Score = 32.7 bits (71), Expect = 0.058
Identities = 19/69 (27%), Positives = 28/69 (40%), Gaps = 2/69 (2%)
Query: 141 TSSNLSRHKQTHRSLDSVAAKRCPECGKAYVSMPALAMHVLTHR--MGHICGVCGKHFSR 198
T L + + HR D P+C K++ L H TH C C + F+R
Sbjct: 8 TEKPLKKRSRAHRLGDPRFYCTYPDCPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFAR 67
Query: 199 PWLLRGHVR 207
+L HV+
Sbjct: 68 SDVLNRHVQ 76
Score = 32.7 bits (71), Expect = 0.058
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Query: 134 ECGKRYATSSNLSRHKQTHRSLDSVAAKRCPECGKAYVSMPALAMHV 180
+C K + +L RH++TH ++V A C C +A+ L HV
Sbjct: 32 DCPKSFTRKEHLRRHERTH---ENVKAFSCSFCNRAFARSDVLNRHV 75
Score = 26.6 bits (56), Expect = 3.8
Identities = 11/41 (26%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Query: 123 TKDKAAKYDCNECGKRYATSSNLSRH-KQTHRSLDSVAAKR 162
T + + C+ C + +A S L+RH +Q H +++ +R
Sbjct: 49 THENVKAFSCSFCNRAFARSDVLNRHVQQMHLQKQNLSERR 89
>SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 781
Score = 46.0 bits (104), Expect = 6e-06
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Query: 211 GEKPYNC--ASCGKSFADRSNLRAHLQTHSSDKKYECSRCHKSFALKSYLNKHQEAACVR 268
G+ Y C C KSF + + R H ++H++ K + C C SF LN+H V+
Sbjct: 13 GDIRYKCDFQGCTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLNRHVNQKHVK 72
Query: 269 SDD 271
+D
Sbjct: 73 QND 75
Score = 37.9 bits (84), Expect = 0.002
Identities = 19/47 (40%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Query: 192 CGKHFSRPWLLRGHVRSHTGEKPYNCASCGKSFADRSNLRAHL-QTH 237
C K F+R R H RSHT K + C C SF L H+ Q H
Sbjct: 24 CTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLNRHVNQKH 70
Score = 28.3 bits (60), Expect = 1.2
Identities = 15/67 (22%), Positives = 30/67 (44%), Gaps = 5/67 (7%)
Query: 116 RAPQSPSTKDKAAKYDCN--ECGKRYATSSNLSRHKQTHRSLDSVAAKRCPECGKAYVSM 173
+A +S + ++ +Y C+ C K + + RH ++H + + CP C ++
Sbjct: 3 KAKKSRAYQEGDIRYKCDFQGCTKSFTRKEHARRHFRSHTNSKAFI---CPHCSSSFTRS 59
Query: 174 PALAMHV 180
L HV
Sbjct: 60 DVLNRHV 66
>SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 567
Score = 45.2 bits (102), Expect = 1e-05
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 7/56 (12%)
Query: 187 HICGVCGKHFSRPWLLRGHVRSHTGEKPYNCA-------SCGKSFADRSNLRAHLQ 235
++C C + F+R L+ H+RSHT EKP+ C+ CG+ F+ R L H Q
Sbjct: 70 YVCETCTRAFARLEHLKRHIRSHTNEKPFTCSEIDGLPTGCGRQFSRRDLLLRHQQ 125
Score = 41.1 bits (92), Expect = 2e-04
Identities = 17/58 (29%), Positives = 34/58 (58%), Gaps = 7/58 (12%)
Query: 213 KPYNCASCGKSFADRSNLRAHLQTHSSDKKYECSR-------CHKSFALKSYLNKHQE 263
K Y C +C ++FA +L+ H+++H+++K + CS C + F+ + L +HQ+
Sbjct: 68 KQYVCETCTRAFARLEHLKRHIRSHTNEKPFTCSEIDGLPTGCGRQFSRRDLLLRHQQ 125
Score = 27.1 bits (57), Expect = 2.9
Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Query: 118 PQSPSTKDKAAKYDCNECGKRYATSSNLSRHKQTH 152
P +P K K +Y C C + +A +L RH ++H
Sbjct: 60 PNAPPQKVK--QYVCETCTRAFARLEHLKRHIRSH 92
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 43.2 bits (97), Expect = 4e-05
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Query: 189 CGVCGKHFSRPWLLRGHVRSHTGEKPYNCA--SCGKSFADRSNLRAHLQTHSS 239
C +C K F R H+R+HTGEKP+ C C K F+ L H + H++
Sbjct: 28 CPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRHARIHTN 80
Score = 40.7 bits (91), Expect = 2e-04
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Query: 141 TSSNLSRHKQTHRSLDSVAAKRCPECGKAYVSMPALAMHVLTH--RMGHICGV--CGKHF 196
T++ + ++ ++ D+ +CP C KA+ + H+ TH H+C C K F
Sbjct: 6 TATTTGKPSRSTKNPDAPRPYKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRF 65
Query: 197 SRPWLLRGHVRSHT 210
SR L H R HT
Sbjct: 66 SRSDELTRHARIHT 79
Score = 38.7 bits (86), Expect = 9e-04
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Query: 213 KPYNCASCGKSFADRSNLRAHLQTHSSDKKYECS--RCHKSFALKSYLNKH 261
+PY C C K+F + H++TH+ +K + C+ C K F+ L +H
Sbjct: 24 RPYKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRH 74
Score = 29.1 bits (62), Expect = 0.71
Identities = 17/70 (24%), Positives = 25/70 (35%), Gaps = 1/70 (1%)
Query: 114 TPRAPQSPSTKDKAAKYDCNECGKRYATSSNLSRHKQTHRSLDSVAAKRCPECGKAYVSM 173
T + +S D Y C C K + + +RH +TH + P C K +
Sbjct: 10 TGKPSRSTKNPDAPRPYKCPLCTKAFYRLEHQTRHIRTHTG-EKPHVCTFPGCAKRFSRS 68
Query: 174 PALAMHVLTH 183
L H H
Sbjct: 69 DELTRHARIH 78
Score = 26.2 bits (55), Expect = 5.0
Identities = 9/23 (39%), Positives = 15/23 (65%)
Query: 135 CGKRYATSSNLSRHKQTHRSLDS 157
C KR++ S L+RH + H + +S
Sbjct: 61 CAKRFSRSDELTRHARIHTNANS 83
>SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 249
Score = 39.9 bits (89), Expect = 4e-04
Identities = 19/42 (45%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Query: 202 LRGHVRSHTGEKPYNCA--SCGKSFADRSNLRAHLQT-HSSD 240
L H+RSHTGEKP+ C+ C +SF L H++T H +D
Sbjct: 93 LVAHLRSHTGEKPFICSVPECDRSFTRSDALAKHMRTVHEAD 134
>SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 585
Score = 39.1 bits (87), Expect = 7e-04
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Query: 121 PSTKDKAAKYDCNECGKRYATSSNLSRHKQTHRSLDSVAAKRCPEC 166
PS D + C++C KR+ NL+RHK H + + CP C
Sbjct: 22 PSLIDSKRVFPCDQCAKRFTRHENLTRHKACHSKAEPIP---CPYC 64
Score = 33.5 bits (73), Expect = 0.033
Identities = 16/53 (30%), Positives = 23/53 (43%)
Query: 189 CGVCGKHFSRPWLLRGHVRSHTGEKPYNCASCGKSFADRSNLRAHLQTHSSDK 241
C C K F+R L H H+ +P C C + L+ H+Q +DK
Sbjct: 33 CDQCAKRFTRHENLTRHKACHSKAEPIPCPYCEIKCKRKDLLKRHIQRFHNDK 85
Score = 32.7 bits (71), Expect = 0.058
Identities = 14/50 (28%), Positives = 19/50 (38%)
Query: 212 EKPYNCASCGKSFADRSNLRAHLQTHSSDKKYECSRCHKSFALKSYLNKH 261
++ + C C K F NL H HS + C C K L +H
Sbjct: 28 KRVFPCDQCAKRFTRHENLTRHKACHSKAEPIPCPYCEIKCKRKDLLKRH 77
>SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 442
Score = 33.9 bits (74), Expect = 0.025
Identities = 26/75 (34%), Positives = 34/75 (45%), Gaps = 8/75 (10%)
Query: 164 PECGKAYVSMPALAMHVLTHRMGHICGVCGKHFSRPWLLRGHVRSHTGEKPYNCASCGKS 223
P C KAY + L H L H GH C P +G V + KPY C C K
Sbjct: 355 PNCDKAYKNQNGLKYHKL-H--GH-CSPITTPTPAPIPHQGFVVEN---KPYRCEVCSKR 407
Query: 224 FADRSNLRAHLQTHS 238
+ + + L+ H +THS
Sbjct: 408 YKNLNGLKYH-RTHS 421
Score = 25.4 bits (53), Expect = 8.8
Identities = 11/34 (32%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 130 YDCNECGKRYATSSNLSRHK-QTHRSLDSVAAKR 162
Y C C KRY + L H+ +H + A+R
Sbjct: 399 YRCEVCSKRYKNLNGLKYHRTHSHLQVSMAQAQR 432
>SPAC2F7.05c |||translation initiation factor eIF5
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 395
Score = 29.9 bits (64), Expect = 0.41
Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 3/50 (6%)
Query: 113 QTPRAPQSPSTKDKAAKYDCNECGKRYATSSNLSRHKQTHRSLDSVAAKR 162
Q P S + KD+ YDC CG R RHK T + + AK+
Sbjct: 104 QNPETELSINKKDQTISYDCKACGYRGVID---GRHKLTGVIVKNPPAKK 150
>SPAC4G9.09c |arg11||N-acetyl-gamma-glutamyl-phosphate
reductase/acetylglutamate kinase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 885
Score = 28.7 bits (61), Expect = 0.94
Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 113 QTPRAPQSPSTKDKAAKYDCNECGKRYATSSNLSRHKQTHRSLDSVAAKR 162
Q+ + P + ST + + N+ + Y+TSS S++K+ +RSL KR
Sbjct: 502 QSTKPPTASSTTNNPSSSQINQ-KRSYSTSSLFSKNKKMNRSLFLKGGKR 550
>SPBC3F6.05 |rga1||GTPase activating protein
Rga1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1150
Score = 28.7 bits (61), Expect = 0.94
Identities = 19/70 (27%), Positives = 30/70 (42%), Gaps = 7/70 (10%)
Query: 181 LTHRMGHICGVCGKHFSRPWLLRGHVRSHTGEKPYNCASCGK-SFADRSNLRAHLQTHSS 239
L + +C VC +L G +R H G C SC K + +R N + ++
Sbjct: 477 LANASSDLCYVCHSALEEDCVLLGEIRCHIG-----CLSCTKCKYNNRENY-DWARWNNQ 530
Query: 240 DKKYECSRCH 249
K+ EC C+
Sbjct: 531 TKQIECYLCY 540
>SPAC1B1.01 |||transcription factor Rdp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 478
Score = 28.7 bits (61), Expect = 0.94
Identities = 9/31 (29%), Positives = 19/31 (61%)
Query: 128 AKYDCNECGKRYATSSNLSRHKQTHRSLDSV 158
A + C++C + S L+ HK+T+ +++V
Sbjct: 137 ATFRCDKCDMMFVKQSGLTNHKRTYHQVETV 167
>SPBC651.08c |rpc1||DNA-directed RNA polymerase III complex large
subunit Rpc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1405
Score = 27.5 bits (58), Expect = 2.2
Identities = 10/17 (58%), Positives = 12/17 (70%)
Query: 210 TGEKPYNCASCGKSFAD 226
T K NCA+CG+S AD
Sbjct: 59 TSNKQINCATCGESMAD 75
>SPAC17G6.08 |pep7|vac1|prevacuole/endosomal FYVE tethering
component Pep7 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 536
Score = 27.5 bits (58), Expect = 2.2
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 8/50 (16%)
Query: 142 SSNLSRHKQTHRSLDS-------VAAKRCPECGKAYVSMPALAMHV-LTH 183
SSNLS H T+ S + V A CP CG ++ AL H+ +TH
Sbjct: 13 SSNLSNHSGTNLSTSAQSDSSNIVKATECPICGLELPNLSALNDHLDVTH 62
>SPBC16G5.17 |||transcription factor, zf-fungal binuclear cluster
type |Schizosaccharomyces pombe|chr 2|||Manual
Length = 560
Score = 27.5 bits (58), Expect = 2.2
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 222 KSFADRSNLRAHLQTHSSDKKYECSRCHKS 251
K+ RS LR + D++Y CSRC +S
Sbjct: 11 KNIRARSCLRCRRRKVKCDRQYPCSRCKES 40
>SPBP8B7.15c |||ubiquitin-protein ligase E3 RBBP6 family
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 482
Score = 26.2 bits (55), Expect = 5.0
Identities = 12/41 (29%), Positives = 17/41 (41%)
Query: 219 SCGKSFADRSNLRAHLQTHSSDKKYECSRCHKSFALKSYLN 259
+C D+ +QT D +EC CH+ L LN
Sbjct: 292 ACRTPCCDKLFCEECIQTALLDSDFECPNCHRKDVLLDTLN 332
>SPCC1682.07 |ssl1||transcription factor TFIIH complex subunit
Ssl1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 421
Score = 25.8 bits (54), Expect = 6.7
Identities = 10/39 (25%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Query: 115 PRAPQSPSTKDKAA-KYDCNECGKRYATSSNLSRHKQTH 152
P+ P SP + ++ +Y C C + ++ H+Q H
Sbjct: 373 PKPPVSPFDESTSSMRYACPSCKNHFCLDCDVFAHEQLH 411
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.317 0.128 0.402
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,018,925
Number of Sequences: 5004
Number of extensions: 33353
Number of successful extensions: 171
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 89
Number of HSP's gapped (non-prelim): 67
length of query: 272
length of database: 2,362,478
effective HSP length: 72
effective length of query: 200
effective length of database: 2,002,190
effective search space: 400438000
effective search space used: 400438000
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 53 (25.4 bits)
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