Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000604-TA|BGIBMGA000604-PA|IPR007087|Zinc finger,
C2H2-type
(272 letters)
Database: mosquito
2123 sequences; 516,269 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY939827-1|AAY18208.1| 680|Anopheles gambiae CTCF-like protein ... 81 4e-17
CR954257-11|CAJ14162.1| 415|Anopheles gambiae predicted protein... 36 0.001
AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific tran... 31 0.047
AY725820-1|AAU50568.1| 593|Anopheles gambiae fruitless female-s... 27 0.43
AY725819-1|AAU50567.1| 569|Anopheles gambiae fruitless male-spe... 27 0.43
AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcript... 27 0.76
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein. 24 5.4
DQ230894-1|ABD94313.1| 315|Anopheles gambiae zinc finger protei... 23 7.1
DQ230893-1|ABD94311.1| 315|Anopheles gambiae zinc finger protei... 23 7.1
DQ182017-1|ABA56309.1| 383|Anopheles gambiae G(alpha)s protein. 23 7.1
>AY939827-1|AAY18208.1| 680|Anopheles gambiae CTCF-like protein
protein.
Length = 680
Score = 80.6 bits (190), Expect = 4e-17
Identities = 40/143 (27%), Positives = 61/143 (42%), Gaps = 6/143 (4%)
Query: 123 TKDKAAKYDCNECGKRYATSSNLSRHKQTHRSLDSVAAKRCPECGKAYVSMPALAMHVL- 181
T + + C C + + T ++L H TH RC C + + L H+
Sbjct: 148 THSEDRPHKCVVCERGFKTLASLQNHVNTHTG---TKPHRCKHCDNCFTTSGELIRHIRY 204
Query: 182 --THRMGHICGVCGKHFSRPWLLRGHVRSHTGEKPYNCASCGKSFADRSNLRAHLQTHSS 239
TH H C C L+ H+R+HTGEKP+ C C + D+ L H++ H+
Sbjct: 205 RHTHERPHKCTECDYASVELSKLKRHIRTHTGEKPFQCPHCTYASPDKFKLTRHMRIHTG 264
Query: 240 DKKYECSRCHKSFALKSYLNKHQ 262
+K Y C C F + L H+
Sbjct: 265 EKPYSCDVCFARFTQSNSLKAHK 287
Score = 74.5 bits (175), Expect = 3e-15
Identities = 43/135 (31%), Positives = 65/135 (48%), Gaps = 6/135 (4%)
Query: 130 YDCNECGKRYATSSNLSRHKQTHRSLDSVAAKRCPECGKAYVSMPALAMHVLTH--RMGH 187
Y CN C LSRH +TH S D +C C + + ++ +L HV TH H
Sbjct: 127 YMCNYCNYTSNKLFLLSRHLKTH-SED--RPHKCVVCERGFKTLASLQNHVNTHTGTKPH 183
Query: 188 ICGVCGKHFSRPWLLRGHVR-SHTGEKPYNCASCGKSFADRSNLRAHLQTHSSDKKYECS 246
C C F+ L H+R HT E+P+ C C + + S L+ H++TH+ +K ++C
Sbjct: 184 RCKHCDNCFTTSGELIRHIRYRHTHERPHKCTECDYASVELSKLKRHIRTHTGEKPFQCP 243
Query: 247 RCHKSFALKSYLNKH 261
C + K L +H
Sbjct: 244 HCTYASPDKFKLTRH 258
Score = 71.3 bits (167), Expect = 3e-14
Identities = 38/135 (28%), Positives = 61/135 (45%), Gaps = 4/135 (2%)
Query: 130 YDCNECGKRYATSSNLSRHKQTHR--SLDSVAAKRCPE-CGKAYVSMPALAMHVLTHRMG 186
Y C+ C R+ S++L HK H+ + K CP CG+ + ++ T
Sbjct: 268 YSCDVCFARFTQSNSLKAHKMIHQVGNKPVFQCKLCPTTCGRK-TDLRIHVQNLHTADKP 326
Query: 187 HICGVCGKHFSRPWLLRGHVRSHTGEKPYNCASCGKSFADRSNLRAHLQTHSSDKKYECS 246
C C F + + H ++H GEK Y C C + +L +HL H+ K Y+C
Sbjct: 327 IKCKRCDSTFPDRYSYKMHAKTHEGEKCYRCEYCPYASISMRHLESHLLLHTDQKPYKCD 386
Query: 247 RCHKSFALKSYLNKH 261
+C ++F K L +H
Sbjct: 387 QCAQTFRQKQLLKRH 401
Score = 70.1 bits (164), Expect = 6e-14
Identities = 41/134 (30%), Positives = 58/134 (43%), Gaps = 6/134 (4%)
Query: 132 CNECGKRYATSSNLSRHKQTHRSLDSVAAKRCPECGKAYVSMPALAMHVLTH--RMGHIC 189
C C + TS L RH + + + +C EC A V + L H+ TH C
Sbjct: 185 CKHCDNCFTTSGELIRHIRYRHTHER--PHKCTECDYASVELSKLKRHIRTHTGEKPFQC 242
Query: 190 GVCGKHFSRPWLLRGHVRSHTGEKPYNCASCGKSFADRSNLRAHLQTHSSDKK--YECSR 247
C + L H+R HTGEKPY+C C F ++L+AH H K ++C
Sbjct: 243 PHCTYASPDKFKLTRHMRIHTGEKPYSCDVCFARFTQSNSLKAHKMIHQVGNKPVFQCKL 302
Query: 248 CHKSFALKSYLNKH 261
C + K+ L H
Sbjct: 303 CPTTCGRKTDLRIH 316
Score = 51.2 bits (117), Expect = 3e-08
Identities = 35/143 (24%), Positives = 54/143 (37%), Gaps = 13/143 (9%)
Query: 130 YDCNECGKRYATSSNLSRHKQTHRSLDSVAAKRCPECGKAYVSMPALAMHVLTHR--MGH 187
+ C C ++L H Q + D +C C + + MH TH +
Sbjct: 298 FQCKLCPTTCGRKTDLRIHVQNLHTADKPI--KCKRCDSTFPDRYSYKMHAKTHEGEKCY 355
Query: 188 ICGVCGKHFSRPWLLRGHVRSHTGEKPYNCASCGKSFADRSNLRAHLQ-THSSD------ 240
C C L H+ HT +KPY C C ++F + L+ H+ H+ D
Sbjct: 356 RCEYCPYASISMRHLESHLLLHTDQKPYKCDQCAQTFRQKQLLKRHMNYYHNPDYVAPTP 415
Query: 241 --KKYECSRCHKSFALKSYLNKH 261
K + C C + F K L +H
Sbjct: 416 KAKTHICPTCKRPFRHKGNLIRH 438
Score = 35.5 bits (78), Expect = 0.002
Identities = 17/59 (28%), Positives = 25/59 (42%)
Query: 203 RGHVRSHTGEKPYNCASCGKSFADRSNLRAHLQTHSSDKKYECSRCHKSFALKSYLNKH 261
RG + Y C C + L HL+THS D+ ++C C + F + L H
Sbjct: 115 RGKRTQQSTGSTYMCNYCNYTSNKLFLLSRHLKTHSEDRPHKCVVCERGFKTLASLQNH 173
>CR954257-11|CAJ14162.1| 415|Anopheles gambiae predicted protein
protein.
Length = 415
Score = 36.3 bits (80), Expect = 0.001
Identities = 34/137 (24%), Positives = 57/137 (41%), Gaps = 15/137 (10%)
Query: 141 TSSNLSRHKQTHRSLDSVAAK------RCPECGKAYVSMPALAMHVLTHRMGH--ICGVC 192
+SS + R K + LD+ AA RCP CG +V + H T +
Sbjct: 268 SSSQMQRPKV--QQLDTAAAPTNHHLYRCPACGNLFVELTNFYNHSCTKAPAQDGVAVAS 325
Query: 193 GKHFSRPWLLRGHVRSHTGE-KPYNCASCGKSFADRSNLRAH-LQTHS-SDKKY--ECSR 247
+ S+P G + T E + + C C S+ + + H + H S++ + +C+
Sbjct: 326 SNNQSQPARTGGSAVTITSEGQRFQCNLCDMSYRTKLQYQKHEYEVHRISNENFGIKCTI 385
Query: 248 CHKSFALKSYLNKHQEA 264
CHK F+ + H A
Sbjct: 386 CHKLFSQRQDYQLHMRA 402
Score = 27.9 bits (59), Expect = 0.33
Identities = 12/53 (22%), Positives = 22/53 (41%), Gaps = 1/53 (1%)
Query: 129 KYDCNECGKRYATSSNLSRHK-QTHRSLDSVAAKRCPECGKAYVSMPALAMHV 180
++ CN C Y T +H+ + HR + +C C K + +H+
Sbjct: 348 RFQCNLCDMSYRTKLQYQKHEYEVHRISNENFGIKCTICHKLFSQRQDYQLHM 400
>AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific
transcription factor FRU-MA protein.
Length = 960
Score = 30.7 bits (66), Expect = 0.047
Identities = 15/45 (33%), Positives = 20/45 (44%), Gaps = 4/45 (8%)
Query: 189 CGVCGKHFSRPWLLRGHVRSHTGEKPYNCASCGKSFADRSNLRAH 233
C C K S W H H + + C CG+ F R N++AH
Sbjct: 901 CVSCHKTVSNRW---HHANIHRPQS-HECPVCGQKFTRRDNMKAH 941
Score = 25.4 bits (53), Expect = 1.8
Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Query: 179 HVLTHR-MGHICGVCGKHFSRPWLLRGHVR 207
H HR H C VCG+ F+R ++ H +
Sbjct: 914 HANIHRPQSHECPVCGQKFTRRDNMKAHCK 943
>AY725820-1|AAU50568.1| 593|Anopheles gambiae fruitless
female-specific zinc-fingerC isoform protein.
Length = 593
Score = 27.5 bits (58), Expect = 0.43
Identities = 20/70 (28%), Positives = 27/70 (38%), Gaps = 4/70 (5%)
Query: 139 YATSSNLSRHKQTHRSLDSVAAKRCPECGKAYVSMPALAMHVLTHR-MGHICGVCGKHFS 197
Y +S H S + A RC CGK + H +H +C C +S
Sbjct: 505 YQLHHQMSYHNMFTPSREPGTAWRCRSCGKEVTNR---WHHFHSHTPQRSLCPYCPASYS 561
Query: 198 RPWLLRGHVR 207
R LR H+R
Sbjct: 562 RIDTLRSHLR 571
>AY725819-1|AAU50567.1| 569|Anopheles gambiae fruitless
male-specific zinc-fingerC isoform protein.
Length = 569
Score = 27.5 bits (58), Expect = 0.43
Identities = 20/70 (28%), Positives = 27/70 (38%), Gaps = 4/70 (5%)
Query: 139 YATSSNLSRHKQTHRSLDSVAAKRCPECGKAYVSMPALAMHVLTHR-MGHICGVCGKHFS 197
Y +S H S + A RC CGK + H +H +C C +S
Sbjct: 481 YQLHHQMSYHNMFTPSREPGTAWRCRSCGKEVTNR---WHHFHSHTPQRSLCPYCPASYS 537
Query: 198 RPWLLRGHVR 207
R LR H+R
Sbjct: 538 RIDTLRSHLR 547
>AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcriptase
protein.
Length = 988
Score = 26.6 bits (56), Expect = 0.76
Identities = 21/77 (27%), Positives = 32/77 (41%), Gaps = 11/77 (14%)
Query: 201 LLRGH--VRSHTGEKPY-----NCASCGKSFADRSNLRAHLQTHSSDKKYECSRCHKSFA 253
LL GH +RS+ EK NC CG + D ++ H + RCH
Sbjct: 915 LLTGHGFLRSYFVEKGILEGSPNCPECGDAVEDVEHVLFHCPRSDRIRNEMQQRCHSRVT 974
Query: 254 LKSYLNKHQEAACVRSD 270
+ + +++ C RSD
Sbjct: 975 MDNIVSE----MCARSD 987
>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
Length = 1229
Score = 23.8 bits (49), Expect = 5.4
Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 115 PRAPQSPSTKDKAAKYDCNECGKRYATSSNLSRHKQTHRSL 155
P P+ P Y+C GKR+ SNLS ++T +L
Sbjct: 1100 PDNPEEPYLD--GINYNCVAPGKRFQPMSNLSGGEKTIAAL 1138
Score = 23.0 bits (47), Expect = 9.4
Identities = 9/16 (56%), Positives = 10/16 (62%)
Query: 215 YNCASCGKSFADRSNL 230
YNC + GK F SNL
Sbjct: 1113 YNCVAPGKRFQPMSNL 1128
>DQ230894-1|ABD94313.1| 315|Anopheles gambiae zinc finger protein
183 protein.
Length = 315
Score = 23.4 bits (48), Expect = 7.1
Identities = 18/61 (29%), Positives = 23/61 (37%), Gaps = 12/61 (19%)
Query: 206 VRSHTGEKPYNCASCGKSFADRSNLRAHLQTHSSDKKYECSRCHKSFALKSYLNKHQEAA 265
+ S E P+ C C +SF D + K Y C RC AL Y + A
Sbjct: 236 IHSDDEELPFKCYVCRESFVDPIVTKC--------KHYFCERC----ALAQYKKSSRCAI 283
Query: 266 C 266
C
Sbjct: 284 C 284
>DQ230893-1|ABD94311.1| 315|Anopheles gambiae zinc finger protein
183 protein.
Length = 315
Score = 23.4 bits (48), Expect = 7.1
Identities = 18/61 (29%), Positives = 23/61 (37%), Gaps = 12/61 (19%)
Query: 206 VRSHTGEKPYNCASCGKSFADRSNLRAHLQTHSSDKKYECSRCHKSFALKSYLNKHQEAA 265
+ S E P+ C C +SF D + K Y C RC AL Y + A
Sbjct: 236 IHSDDEELPFKCYVCRESFVDPIVTKC--------KHYFCERC----ALAQYKKSSRCAI 283
Query: 266 C 266
C
Sbjct: 284 C 284
>DQ182017-1|ABA56309.1| 383|Anopheles gambiae G(alpha)s protein.
Length = 383
Score = 23.4 bits (48), Expect = 7.1
Identities = 10/34 (29%), Positives = 14/34 (41%)
Query: 194 KHFSRPWLLRGHVRSHTGEKPYNCASCGKSFADR 227
+H W RG +++ Y C K F DR
Sbjct: 137 EHTEELWKDRGVQQTYERSNEYQLIDCAKYFLDR 170
Database: mosquito
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 516,269
Number of sequences in database: 2123
Lambda K H
0.317 0.128 0.402
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 239,906
Number of Sequences: 2123
Number of extensions: 8254
Number of successful extensions: 42
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 11
Number of HSP's gapped (non-prelim): 23
length of query: 272
length of database: 516,269
effective HSP length: 63
effective length of query: 209
effective length of database: 382,520
effective search space: 79946680
effective search space used: 79946680
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 47 (23.0 bits)
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