Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000603-TA|BGIBMGA000603-PA|IPR011046|WD40-like,
IPR010978|tRNA-binding arm
(1113 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 38 0.008
SPAC4G8.10 |gos1||SNARE Gos1|Schizosaccharomyces pombe|chr 1|||M... 35 0.073
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 33 0.17
SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78 |Schizosacch... 33 0.17
SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein Bms1|Schizosacc... 33 0.22
SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|ch... 32 0.39
SPAC1783.05 |hrp1|chd1|ATP-dependent DNA helicase Hrp1|Schizosac... 32 0.51
SPBC18E5.07 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 32 0.51
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 32 0.51
SPAC6G10.03c |||abhydrolase family protein, unknown biological r... 31 0.68
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 31 0.90
SPAC688.07c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 31 0.90
SPCC736.07c |||cell polarity protein |Schizosaccharomyces pombe|... 30 1.6
SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces ... 30 2.1
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 29 2.7
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 29 2.7
SPAC18G6.02c |chp1||chromodomain protein Chp1|Schizosaccharomyce... 29 2.7
SPAC1093.05 |||ATP-dependent RNA helicase Hca4 |Schizosaccharomy... 29 2.7
SPAC17C9.12 |||MSP domain|Schizosaccharomyces pombe|chr 1|||Manual 29 2.7
SPBC16C6.08c |qcr6||ubiquinol-cytochrome-c reductase complex sub... 29 3.6
SPCP25A2.03 |||THO complex subunit |Schizosaccharomyces pombe|ch... 29 3.6
SPBC29A10.01 |ccr1|SPBC365.17|NADPH-cytochrome p450 reductase |S... 29 4.8
SPAC57A10.11c |tim40||TIM22 inner membrane protein import comple... 29 4.8
SPAC1687.11 |spb1||rRNA methyltransferase Spb1 |Schizosaccharomy... 29 4.8
SPAC6F12.12 |par2|pbp2|protein phosphatase regulatory subunit Pa... 29 4.8
SPBC19C2.10 |||BAR adaptor protein|Schizosaccharomyces pombe|chr... 29 4.8
SPCC24B10.11c |||THO complex subunit 7 |Schizosaccharomyces pomb... 29 4.8
SPAC17A5.01 |pex6||peroxin-6 |Schizosaccharomyces pombe|chr 1|||... 29 4.8
SPBC3E7.08c |rad13||DNA repair nuclease Rad13|Schizosaccharomyce... 28 6.3
SPBC2A9.11c ||SPBC2D10.01c|nuclear export factor|Schizosaccharom... 28 6.3
SPBC32C12.03c |ppk25||serine/threonine protein kinase Ppk25 |Sch... 28 6.3
SPBC19F8.03c |||clathrin binding protein|Schizosaccharomyces pom... 28 6.3
SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr... 28 6.3
SPBC19F5.05c |ppp1|SPBC25D12.01c|pescadillo-family BRCT domain p... 28 6.3
SPCC70.05c |||serine/threonine protein kinase |Schizosaccharomyc... 28 6.3
SPAC11E3.01c |swr1|SPAC2H10.03c|SNF2 family helicase Swr1|Schizo... 28 6.3
SPBC1604.20c |tea2|klp4|kinesin-like protein Tea2|Schizosaccharo... 28 6.3
SPAC29B12.01 |ino80|SPAC3G6.12|SNF2 family helicase Ino80|Schizo... 28 6.3
SPAC1486.01 |||manganese superoxide dismutase |Schizosaccharomyc... 28 8.3
SPAC1783.07c |pap1|caf3, caf3|transcription factor Caf3|Schizosa... 28 8.3
SPBC32F12.08c |duo1||DASH complex subunit Duo1 |Schizosaccharomy... 28 8.3
SPAC13A11.01c |rga8|SPAC2F7.18c|GTPase activating protein Rga8 |... 28 8.3
SPAC1F8.03c |str3||siderophore-iron transporter Str3 |Schizosacc... 28 8.3
SPBC11C11.08 |srp1||SR family protein Srp1|Schizosaccharomyces p... 28 8.3
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 37.9 bits (84), Expect = 0.008
Identities = 30/121 (24%), Positives = 58/121 (47%), Gaps = 6/121 (4%)
Query: 371 KVDELTGEQEMLREEVANLSSAREKLRDR-VTQ--LE--DELRRLKEAMSNNAGGGDNEE 425
++ EL ++E L ++V NLS+ LR+ TQ LE DE+ RL+ + + + E+
Sbjct: 1529 EIHELRSDKEGLVQQVQNLSAELAALREHSPTQGSLENADEIARLRSQLESTKQYYEKEK 1588
Query: 426 EADVPLAQRRRFTRVEMARVLMERNQYKERLMELQDAVRWTEMVRASRVDNSIDKKSKQS 485
E ++ A+ E + +E NQ E+ +++ + + ++ID KQ
Sbjct: 1589 ETEILAARSELVAEKEKTKEELE-NQLNEKSQRIKELEEQAQKNSSENTHDNIDDMIKQQ 1647
Query: 486 I 486
+
Sbjct: 1648 V 1648
Score = 28.7 bits (61), Expect = 4.8
Identities = 26/112 (23%), Positives = 52/112 (46%), Gaps = 3/112 (2%)
Query: 39 IYQEFERMIARYDEDVVKTLMPLLVNVLECLDSAYQTNQEHEVELELLREDNEQLVTQYE 98
I + +R+I ED+ K L+ +S ++ +L LR + +++ T+Y
Sbjct: 1057 IRSDADRVITSLKEDIEKE-RSLMKECHSNYESEIVSHGRTTQKLRDLRTEFDEVNTKYL 1115
Query: 99 REKAARKYAEQKLLEAEDHYEGERKDLTGRLEALDSIVRMLELKHKNSLDHA 150
+ KA + L AE + +RK + + +L + L L+++N L H+
Sbjct: 1116 KLKANFEQQHSGLSGAEKDWNIQRKAMEDEISSLKDYI--LGLENQNKLLHS 1165
>SPAC4G8.10 |gos1||SNARE Gos1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 182
Score = 34.7 bits (76), Expect = 0.073
Identities = 27/104 (25%), Positives = 50/104 (48%), Gaps = 6/104 (5%)
Query: 381 MLREEVANLSSAREKLRDRVTQ---LEDELRRLKEAMSNNAGGGDNEEEADVPLAQRRRF 437
+LR+ V S + L Q L +E R+L E +++A D+ A + R
Sbjct: 5 LLRDSVKKASQFQRSLHSDPNQAKILLEERRKLLEEANSSADENDSHSMATIKSHFERLK 64
Query: 438 TRVEMARVLMERNQYKERLM---ELQDAVRWTEMVRASRVDNSI 478
++ ++++ K+ ++ EL+DA + EM A+ +DNSI
Sbjct: 65 RDEQLLNGVLKKYDAKQEVLSPEELRDAQNFLEMQEANSLDNSI 108
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 33.5 bits (73), Expect = 0.17
Identities = 26/126 (20%), Positives = 55/126 (43%), Gaps = 4/126 (3%)
Query: 358 KNALNVVKDDLIVKVDELTGEQEMLREEVANLSSAREKLRDRVTQLEDELRRLKEAMSNN 417
+N + +++ L + +L E E +R+E+ N ++ DR+T +++ K+
Sbjct: 656 RNEMTAIQESLSKRNQDLLSEMEAIRKELENSKYQQQLSTDRLTNANNDVEAFKKEAKEL 715
Query: 418 AGGGDNEEEADVPLAQRRRFTRVEMARVLMERNQYKERLMELQDAVRWTEMVRASRVDNS 477
N+ D+ Q +R ++ A L+ N ERL +A + + +R +
Sbjct: 716 R--SINQNLQDIISRQDQRASK--FAEELLHVNSLAERLKGELNASKGEKDLRKRTQERL 771
Query: 478 IDKKSK 483
I + K
Sbjct: 772 ISENDK 777
>SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 803
Score = 33.5 bits (73), Expect = 0.17
Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 13/90 (14%)
Query: 378 EQEMLREEVANLS-SAREKLRDRVTQLEDELRRLKEAMSNNAGGGDNEEEADVPLAQRRR 436
E E LR+E S REKL ++T L++E +L A EEE + + ++
Sbjct: 358 ELESLRKETDTTSVERREKLESKLTDLKEEQDKLSAAW---------EEERKLLDSIKKA 408
Query: 437 FTRVEMARVLMERNQYK---ERLMELQDAV 463
T +E AR+ +ER Q + R ELQ A+
Sbjct: 409 KTELEQARIELERTQREGNYARASELQYAI 438
>SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein
Bms1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1121
Score = 33.1 bits (72), Expect = 0.22
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 88 EDNEQLVTQYEREKAARKYAEQKL-LEAEDHYEGERKDLTGRLEALDSIVRMLELKHK 144
E +++ Q ERE+ ARK E +L E ED + E+KD+ E + I R L + +
Sbjct: 647 ESADEVDFQTEREENARKKEELRLRFEEEDRGDPEKKDVDWYTEEKEKIARQLVINRE 704
>SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 750
Score = 32.3 bits (70), Expect = 0.39
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Query: 365 KDDLIVKVDELTGEQEMLREEVANLSSAREKLRDRVTQLEDELRRLKEAMSNNAGGGDNE 424
++DL K +ELT +++LRE+ + +KLR V QLE E + LK+A N+ ++
Sbjct: 508 EEDLQNKEEELTELRKLLREQTQD----SQKLRLLVEQLELERQDLKQAGENHYSNLSSD 563
Query: 425 EEADV 429
E +
Sbjct: 564 YETQI 568
>SPAC1783.05 |hrp1|chd1|ATP-dependent DNA helicase
Hrp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1373
Score = 31.9 bits (69), Expect = 0.51
Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Query: 80 EVELELLREDNEQLVTQYEREKAARKYAEQKLLEAEDH----YEGERKDLTGRLEALDSI 135
E E+E + E+ L Q +E+ + E++ EDH Y+ K +T R + + +
Sbjct: 948 EEEMERIEEEERMLAAQRAKEEERERREEEERENDEDHPSRTYKRTTKSITKRQQRREEM 1007
Query: 136 VRMLELK 142
VR E++
Sbjct: 1008 VREKEIR 1014
>SPBC18E5.07 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 615
Score = 31.9 bits (69), Expect = 0.51
Identities = 28/107 (26%), Positives = 38/107 (35%), Gaps = 10/107 (9%)
Query: 700 GKSESVESQPNGPVEDXXXXXXXXXXVIGTTKLIKATLLTPPSTPVKEP--------EEP 751
G S S SQP+ + K I+ + P PVKE E
Sbjct: 355 GPSLSSASQPSAASSSSSSEPSNLDKINDVKKNIEVSANEPQPRPVKEDVPKSQVGGETD 414
Query: 752 AAD--NDENPKESMVKNVEDEAENDGHDSPPLSSTPNNVTEPSVSSP 796
D N+ PKE ++ E G + PP + P TE S + P
Sbjct: 415 TTDVINNSTPKEETEESPSTELPETGKEQPPNKAEPAVPTEASSTKP 461
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 31.9 bits (69), Expect = 0.51
Identities = 29/133 (21%), Positives = 63/133 (47%), Gaps = 4/133 (3%)
Query: 21 HEDSHVVMSEKVQSLAGSIYQEFERMIARYDEDVVKT--LMPLLVNVLECLDSAYQTNQE 78
+ D+ V + ++ L+ I EF+ + + D +K L LL N + L + +N +
Sbjct: 310 YSDAIVHKDKLIEDLSTRI-SEFDNLKSERDTLSIKNEKLEKLLRNTIGSLKDSRTSNSQ 368
Query: 79 HEVELELLREDNEQLVTQYEREKAARKYAEQKLLEAEDHYEGERKDLTGRLEALDSIVRM 138
E E+ L+E N + +Q ++ EQ+ + + + +L+ + + + +
Sbjct: 369 LEEEMVELKESNRTIHSQLTDAESKLSSFEQENKSLKGSIDEYQNNLSSKDKMVKQVSSQ 428
Query: 139 LELKHKNSLDHAS 151
LE + ++SL HA+
Sbjct: 429 LE-EARSSLAHAT 440
Score = 31.1 bits (67), Expect = 0.90
Identities = 22/106 (20%), Positives = 51/106 (48%), Gaps = 3/106 (2%)
Query: 356 ATKNALNVVKDDLIVKVDELTGEQEMLREEVANLSSAREKLRDRVTQLEDELRRLKEAMS 415
A K L+ ++L +++D+LTG+ ++ + ++L ++ ++ L++E +A++
Sbjct: 913 AEKQLLHTENEELHIRLDKLTGKLKIEESKSSDLGKKLTARQEEISNLKEENMSQSQAIT 972
Query: 416 NNAGGGDNEEEADVPLAQRRRFTRVEMARVLMERNQY---KERLME 458
+ D L + +++ V +ERN ERLM+
Sbjct: 973 SVKSKLDETLSKSSKLEADIEHLKNKVSEVEVERNALLASNERLMD 1018
Score = 28.3 bits (60), Expect = 6.3
Identities = 31/140 (22%), Positives = 59/140 (42%), Gaps = 14/140 (10%)
Query: 365 KDDLIVKVDELTG-------EQEMLREEVANLSSAREKLRDRVTQLEDELRRLKEAMSNN 417
KD V+++ELT E +++E+ L +K D D+L+ +A+
Sbjct: 1090 KDQRNVELEELTSKYGKLGEENAQIKDELLALRKKSKKQHDLCANFVDDLKEKSDALEQL 1149
Query: 418 AGGGDNEEEADVPLAQRRRFTRVEMARVLMERNQYKERLMELQDAVRWTEMVRAS--RVD 475
+ + E V L Q + N+ + L D+ ++R+ RV+
Sbjct: 1150 T---NEKNELIVSLEQSNSNNEALVEERSDLANRLSDMKKSLSDSDNVISVIRSDLVRVN 1206
Query: 476 NSID--KKSKQSIWTFFSKL 493
+ +D KK K S+ T +S++
Sbjct: 1207 DELDTLKKDKDSLSTQYSEV 1226
>SPAC6G10.03c |||abhydrolase family protein, unknown biological
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 428
Score = 31.5 bits (68), Expect = 0.68
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 5/58 (8%)
Query: 743 TPVKEPEEPAADNDENPKESMVKNVEDEAENDGHDSPPLSSTPNNV--TEPSVSSPEP 798
+PV PE P A ND+ + +V A + D PPLS+ N V T+ + EP
Sbjct: 204 SPVAIPENPFASNDD---AEVYNSVASSAVHAVMDEPPLSNVTNEVLQTQEETTGLEP 258
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 31.1 bits (67), Expect = 0.90
Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 4/78 (5%)
Query: 755 NDENPKESMVKNVEDEAEN---DGHDSPPLSSTPNNVTEPSVSSPEPGLDAFAQEQSNVE 811
N+++ E + N ED A D ++ L S N VT+ SV S D+ + Q E
Sbjct: 3928 NEDDDLEELA-NEEDTANQSDLDESEARELESDMNGVTKDSVVSENENSDSEEENQDLDE 3986
Query: 812 NRGDVPDRKMSTVMATMW 829
D+P+ +++ +W
Sbjct: 3987 EVNDIPEDLSNSLNEKLW 4004
>SPAC688.07c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1038
Score = 31.1 bits (67), Expect = 0.90
Identities = 39/172 (22%), Positives = 69/172 (40%), Gaps = 12/172 (6%)
Query: 630 ANEDDKTENNMSLAYEMSKAQSAHSPEVEQISRQLQSTQSVEYTEKNLSSLVWICASTQA 689
AN+D +N S E + +++ P EQ Q + Q VE + N+++ + + +
Sbjct: 354 ANDDANELDNTS---EKATLETSSKPVTEQAIEQSEVVQEVEEGDTNMTTNTILKPTDEI 410
Query: 690 --KGVVMSLLCVGKSESVESQPNGPVEDXXXXXXXXXXVIGTTKLIKAT-LLTPP--STP 744
KG S+ + S E P D + + K+T L+ P +P
Sbjct: 411 INKGYAYSITSSHSNHSNEKFEQIPSPDEKLSRTDIDTHVKQLQTTKSTDSLSIPFVESP 470
Query: 745 VKEPEEPAADNDENPKESMVKNVEDEAENDGHDSPPLSSTPNNVTEPSVSSP 796
+ PEE +D+ N + +DE + P ++S V P + SP
Sbjct: 471 QQNPEEELSDSLSNDFGIDAEKEKDENLSKPEHHPSITS----VNSPFLYSP 518
>SPCC736.07c |||cell polarity protein |Schizosaccharomyces pombe|chr
3|||Manual
Length = 699
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/56 (26%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 502 LRAVAASQPTMRHSQTQGDFLEAQLS-DHHQKRHERTEQFRQVRVHVRKEDGRTHA 556
LR + PT + T + S H+KR +R +F+Q ++ +K + HA
Sbjct: 281 LRDIVLEHPTAKAQDTGESNKDNNTSTSKHKKRPKRLSKFKQAKLETKKSGNKDHA 336
>SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 905
Score = 29.9 bits (64), Expect = 2.1
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
Query: 67 ECLDSAYQTNQEHEVELELLREDNEQLVTQYEREKAARKYAEQKLLEAEDHYEGERKDLT 126
E LD+ + ++ VE+ L + ++ ER KAARK AEQ E E + +
Sbjct: 414 EVLDNLERKLRQLRVEIRALEREKDE--ASKERLKAARKEAEQVEEETRPIREKYELEKS 471
Query: 127 GRLEALDSIVRMLELKHK 144
E D+ R+ ELK K
Sbjct: 472 RGSELQDAKRRLDELKAK 489
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 29.5 bits (63), Expect = 2.7
Identities = 22/99 (22%), Positives = 48/99 (48%), Gaps = 10/99 (10%)
Query: 744 PVKEPEEPAADNDENPKESMVKNVEDEAENDGHDSPPLSSTPNNV--------TEPSVSS 795
P +EP+EPA + E +E M + +E++ E+ + + ++ + T +
Sbjct: 592 PFEEPDEPAHEPTEEEQEEM-RKLEEKIESTKYGLETIQTSGKTIKQRIEQKKTRLMILR 650
Query: 796 PE-PGLDAFAQEQSNVENRGDVPDRKMSTVMATMWLGTK 833
E LDA +E ++ + D+++ST + ++ +G K
Sbjct: 651 EELQELDAIKEEAQKQISQSLIADQQLSTQIGSVGMGKK 689
>SPAC17C9.03 |tif471||translation initiation factor eIF4G
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1403
Score = 29.5 bits (63), Expect = 2.7
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 74 QTNQEHEVELELLREDNEQLVTQYEREKAARKYAEQKLLEAEDHYEGERKDLTGRLEALD 133
+ N + E E + RE E+ + E EKA R+ E+ EAE++ + E ++ R EA +
Sbjct: 558 EENAKREAEEQAKREAEEKAKREAE-EKAKREAEEKAKREAEENAKREAEEKAKR-EAEE 615
Query: 134 SIVRMLELKHKNSLD 148
R E K K +
Sbjct: 616 KAKREAEEKAKREAE 630
Score = 29.1 bits (62), Expect = 3.6
Identities = 35/149 (23%), Positives = 60/149 (40%), Gaps = 5/149 (3%)
Query: 78 EHEVELELLREDNEQLVTQYEREKAARKYAEQKLLEAEDHYEGERKDLTGRLEALDSIVR 137
+ E E + RE E + E EKA R+ E+ EAE+ + E ++ R EA + R
Sbjct: 586 KREAEEKAKREAEENAKREAE-EKAKREAEEKAKREAEEKAKREAEEKAKR-EAEEKAKR 643
Query: 138 MLELKHKNSLDHASXXXXXXXXXXXXYAKLHERYTELFKTHMDYMERTKLLLSTASDRSE 197
E K K + + K E K + + + A ++E
Sbjct: 644 EAEEKAKREAEEKAKREAEENAKREAEEKAKREAEENAKREAEEKVKRE-TEENAKRKAE 702
Query: 198 VRGR--LGLNPVGRSSGPISFGFASLESS 224
G+ NP +SS P++ A++++S
Sbjct: 703 EEGKREADKNPEIKSSAPLASSEANVDTS 731
>SPAC18G6.02c |chp1||chromodomain protein Chp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 960
Score = 29.5 bits (63), Expect = 2.7
Identities = 23/98 (23%), Positives = 38/98 (38%), Gaps = 5/98 (5%)
Query: 358 KNALNVVKDDLIVKVDELTGEQEMLREEVANLSSAREKLRDRVTQLEDELRRLKEAMSNN 417
K ++ L+ D E + ++ E L R+K + +TQL +++ + M
Sbjct: 71 KKRKKLIAKGLLEPFDAEDNEAKKMKREKEILRQQRQKRKSELTQLSQKVKEKFKKMRKK 130
Query: 418 AGG-----GDNEEEADVPLAQRRRFTRVEMARVLMERN 450
++EEE D F R M L ERN
Sbjct: 131 PARRIVTIANDEEEEDDQTMDEDAFERKSMQGELKERN 168
>SPAC1093.05 |||ATP-dependent RNA helicase Hca4 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 735
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/58 (24%), Positives = 29/58 (50%)
Query: 472 SRVDNSIDKKSKQSIWTFFSKLFRPLSTPHLRAVAASQPTMRHSQTQGDFLEAQLSDH 529
S ++ +D ++KQ++ T + ++F + L A + + GDFL+ + DH
Sbjct: 503 SSEESEVDVENKQNVRTKYDRIFERKNQDVLAAHRQRLVEVNSDEDDGDFLQVKRVDH 560
>SPAC17C9.12 |||MSP domain|Schizosaccharomyces pombe|chr 1|||Manual
Length = 319
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Query: 741 PSTPVKEPEEPAADNDENPKESMVKNVEDEAENDGHDSPPLSSTPNNVTEPSVSSP 796
PST VK P A+N+ PK V N+ + ++ NN + + +SP
Sbjct: 209 PSTAVKAPTATVAENEPYPKPQSVPTT-TSPNNENNALRSTANVINNTRQSTATSP 263
>SPBC16C6.08c |qcr6||ubiquinol-cytochrome-c reductase complex
subunit 8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 214
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 746 KEPEEPAADNDENPKESMVKNVEDEAEND 774
KEPEEP + E P+E + E+E E +
Sbjct: 117 KEPEEPPKEEAEEPQEGGEEEEEEEEEEE 145
>SPCP25A2.03 |||THO complex subunit |Schizosaccharomyces pombe|chr
3|||Manual
Length = 752
Score = 29.1 bits (62), Expect = 3.6
Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Query: 624 GESVFYANEDDKTENNMSLAYEMSKAQSAHSPEVEQISRQLQSTQSVEYTEKNLSSLVWI 683
GES+ N+ K+E++ + E SK S+H E I + Q+ E TE+ S++
Sbjct: 631 GESLVQVNKVLKSEDDNTS--EASKDPSSHVKSPENIEKLKQNDDHFEVTEEITSTINSK 688
Query: 684 CASTQAKGVVMSLLCVGKS 702
+ Q V ++L V S
Sbjct: 689 ISEKQENNVAETILEVTSS 707
>SPBC29A10.01 |ccr1|SPBC365.17|NADPH-cytochrome p450 reductase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 678
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/62 (27%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 55 VKTLMPLLVNVLECLDSAYQTNQEHEVELELLREDNEQLVTQYEREKAARKYAEQKLLEA 114
VK LL + D + +E + ++L+ D+ +L+T + RE+ + Y + +LLE
Sbjct: 560 VKVAKTLLFYGCQYSDKDFLYKEEWQQYKDVLK-DSFELITAFSREQDHKIYVQHRLLEH 618
Query: 115 ED 116
D
Sbjct: 619 SD 620
>SPAC57A10.11c |tim40||TIM22 inner membrane protein import complex
subunit Tim40|Schizosaccharomyces pombe|chr 1|||Manual
Length = 313
Score = 28.7 bits (61), Expect = 4.8
Identities = 32/157 (20%), Positives = 60/157 (38%), Gaps = 11/157 (7%)
Query: 620 GCMIGESVFYANEDDKTENNMSLAYEMSKAQSAHSPEVEQISRQLQSTQSVEYTEKNLSS 679
G ++ E + +DD+ E S +SA +P+ +I+ + +
Sbjct: 155 GNILREQIATGKDDDEYARKFEEVEEESSEESAFNPDTGEINWDCPCLGGMAHGPCGEEF 214
Query: 680 LVWICASTQAKGVVMSLLCVGKSESVESQPNGPVEDXXXXXXXXXXVIGTTKLIKATLLT 739
+K + C+ K +++++ E ++G ++ A
Sbjct: 215 KAAFSCFVYSKSEPKGMECLDKFQAMQACFQKHPE-------IYQDMVGESEEEDAETNE 267
Query: 740 PPSTPVKE---PEEPAADNDENPKESMVKNVEDEAEN 773
PST E P+ P +DN NP+E V N+E E N
Sbjct: 268 KPSTTSDENNQPQSPPSDNASNPEED-VMNMEKEIVN 303
>SPAC1687.11 |spb1||rRNA methyltransferase Spb1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 802
Score = 28.7 bits (61), Expect = 4.8
Identities = 25/98 (25%), Positives = 48/98 (48%), Gaps = 10/98 (10%)
Query: 361 LNVVKDDLIVKVDELTGEQEMLREEVANLSSAREKLRDRV---TQLEDELRRLKEAMSNN 417
L+V +++++ +L Q + ++E ++ R K+RD + ++EDE + + E +
Sbjct: 292 LDVTTEEILLCCSDL---QVLGKKEFRDILRWRLKIRDEMGIGKKVEDEQKTVVEEIPEM 348
Query: 418 AGGGDNEEEADVPLAQRRRFTRVEMARVLMERNQYKER 455
D EE D L RV++ R + NQ K+R
Sbjct: 349 ----DEEERLDQELQDLSEAERVKLKRERRKANQRKQR 382
>SPAC6F12.12 |par2|pbp2|protein phosphatase regulatory subunit
Par2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 627
Score = 28.7 bits (61), Expect = 4.8
Identities = 19/57 (33%), Positives = 23/57 (40%), Gaps = 1/57 (1%)
Query: 755 NDENPKESMVKNVEDEAENDGHDSPPLSSTPNNVTEPSVSSPEPGLDAFAQEQSNVE 811
N PK V + DE ND S S P + VS P P L+ F NV+
Sbjct: 125 NYPEPKNDSVSSNIDEFPNDSISSASFLSVPQSTPPYLVSQPTP-LNKFLAGAENVD 180
>SPBC19C2.10 |||BAR adaptor protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 501
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 363 VVKDDLIVKVDELTGEQEMLREEVANLSSAREKLRDRVTQLEDELRRLKE 412
+V D L K+ + E+ L E++ N AR K + + + ED + +LKE
Sbjct: 148 LVFDALSTKIQKAKKEESKLEEDLRN---ARAKYEESLEEFEDRMVQLKE 194
>SPCC24B10.11c |||THO complex subunit 7 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 202
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 736 TLLTPPSTPVKEPEEPAADNDENPKES 762
++L PPS P + EE A ENP S
Sbjct: 168 SILHPPSNPESDSEEGIASEGENPSSS 194
>SPAC17A5.01 |pex6||peroxin-6 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 948
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/40 (35%), Positives = 24/40 (60%)
Query: 800 LDAFAQEQSNVENRGDVPDRKMSTVMATMWLGTKNGNLYV 839
LD+ A + N + G+V DR +S ++A + +K+ N YV
Sbjct: 756 LDSIAPHRGNSSDSGNVMDRVVSQLLAELDSISKDNNKYV 795
>SPBC3E7.08c |rad13||DNA repair nuclease Rad13|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1112
Score = 28.3 bits (60), Expect = 6.3
Identities = 21/88 (23%), Positives = 39/88 (44%), Gaps = 13/88 (14%)
Query: 741 PSTPVKEPEEPAADNDENPKESMVKNVEDEAENDGHDSPPLSSTPNNVTEPSVSSPEPGL 800
P PVK+ E+ + NP E +N++++A+ DG VT P S + +
Sbjct: 579 PLLPVKDDEKDLDLRELNPLEPF-ENMKEQAD-DG-----------TVTNPLNVSSDKAM 625
Query: 801 DAFAQEQSNVENRGDVPDRKMSTVMATM 828
+ N ++ GD+ + V+ T+
Sbjct: 626 SVYLLSSENAKDTGDIKSESIDAVLPTL 653
>SPBC2A9.11c ||SPBC2D10.01c|nuclear export
factor|Schizosaccharomyces pombe|chr 2|||Manual
Length = 395
Score = 28.3 bits (60), Expect = 6.3
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 388 NLSSAREKLRDRVTQLEDELRRLKEAMSNNAGG-GDNEEEADVPLAQRRRF 437
NL S R+ + T +ED+ R++++ +S N E+E D +RRRF
Sbjct: 58 NLESLRKLTNAQNTIIEDKKRKVEKPVSGNQFSLLSEEDEVDKKEKRRRRF 108
>SPBC32C12.03c |ppk25||serine/threonine protein kinase Ppk25
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 423
Score = 28.3 bits (60), Expect = 6.3
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Query: 41 QEFERMIAR--YDEDVVKTLMPLLVNVLECLDSAYQTNQEHEVELELLREDNEQL 93
Q E ++AR DED+ ++ L+N L L + +++ ++E LL +D+ Q+
Sbjct: 136 QLLEYILARGKLDEDLARSFAMQLINALVYLHKNFIVHRDLKIENVLLTQDSRQV 190
>SPBC19F8.03c |||clathrin binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 649
Score = 28.3 bits (60), Expect = 6.3
Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 370 VKVDELTGEQEMLREEVANLSSAREKLRDRVTQL 403
+K +E+ GE+E EEV N S E L D+V L
Sbjct: 356 IKEEEMEGEEEEEEEEVPNYESENE-LEDKVGDL 388
>SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 633
Score = 28.3 bits (60), Expect = 6.3
Identities = 16/44 (36%), Positives = 20/44 (45%)
Query: 82 ELELLREDNEQLVTQYEREKAARKYAEQKLLEAEDHYEGERKDL 125
EL LR N QL + +E + EQK E E+ KDL
Sbjct: 384 ELAKLRSTNAQLTDRITQESKKASFLEQKASEQEEVIRKLEKDL 427
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/42 (33%), Positives = 23/42 (54%)
Query: 374 ELTGEQEMLREEVANLSSAREKLRDRVTQLEDELRRLKEAMS 415
+L ++ L EE+A L S +L DR+TQ + L++ S
Sbjct: 373 QLLKREKQLSEELAKLRSTNAQLTDRITQESKKASFLEQKAS 414
>SPBC19F5.05c |ppp1|SPBC25D12.01c|pescadillo-family BRCT domain
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 607
Score = 28.3 bits (60), Expect = 6.3
Identities = 22/83 (26%), Positives = 39/83 (46%), Gaps = 2/83 (2%)
Query: 66 LECLDSAYQTNQEHEVELELLRED--NEQLVTQYEREKAARKYAEQKLLEAEDHYEGERK 123
+E +D A + + EH+ ELE + V Q + K ++ L AE+ E E K
Sbjct: 499 VEQIDDAEEEDLEHQRELEAEAGGVAYSEYVKQNSKSAKKTKKRQRDTLTAEEKEEKEAK 558
Query: 124 DLTGRLEALDSIVRMLELKHKNS 146
+L+ + + +LK++NS
Sbjct: 559 ELSKMMMSNKQRKLYSKLKNENS 581
>SPCC70.05c |||serine/threonine protein kinase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 781
Score = 28.3 bits (60), Expect = 6.3
Identities = 21/79 (26%), Positives = 32/79 (40%), Gaps = 12/79 (15%)
Query: 739 TPPSTPVKEPEEPAADNDENPKESMVKNVEDEAENDGHDSPPLSSTPNNVTEPSVSSPEP 798
T P+TP+ +A P S +KN+ ++A + GH S N P+ SP
Sbjct: 101 TAPATPIPV----SASRHHKPHHSGLKNLLEKAMHPGHKS--------NANSPTSESPSK 148
Query: 799 GLDAFAQEQSNVENRGDVP 817
G +F +N P
Sbjct: 149 GFGSFINNHILHKNTSSHP 167
>SPAC11E3.01c |swr1|SPAC2H10.03c|SNF2 family helicase
Swr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1288
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 86 LREDNEQLVTQYEREKAARKYAEQKLLEAEDHYEGERKDLT 126
L+ N L+ ERE+ A + ++ + L +ED E E +D+T
Sbjct: 265 LKYSNPDLIKNIEREEEAEETSDDEPLSSEDE-ENEDEDIT 304
>SPBC1604.20c |tea2|klp4|kinesin-like protein
Tea2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 628
Score = 28.3 bits (60), Expect = 6.3
Identities = 16/49 (32%), Positives = 25/49 (51%)
Query: 92 QLVTQYEREKAARKYAEQKLLEAEDHYEGERKDLTGRLEALDSIVRMLE 140
+ VT + E A+ A +K + ++Y K LT LE D+ + MLE
Sbjct: 468 EAVTNVQAELASLHSALEKNAQEVEYYASLVKQLTSDLEERDTYIAMLE 516
>SPAC29B12.01 |ino80|SPAC3G6.12|SNF2 family helicase
Ino80|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1604
Score = 28.3 bits (60), Expect = 6.3
Identities = 9/30 (30%), Positives = 22/30 (73%)
Query: 735 ATLLTPPSTPVKEPEEPAADNDENPKESMV 764
+ +LTP ++P+ + +E +D+D N +++M+
Sbjct: 298 SVVLTPDTSPLLDSDEVVSDDDSNEQQTMM 327
>SPAC1486.01 |||manganese superoxide dismutase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 218
Score = 27.9 bits (59), Expect = 8.3
Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 386 VANLSSAREKLRDRVTQLEDELRRLKEAMSNNAGGGDN 423
V NL++A+EKL D LE E+ L+ A+ N GG N
Sbjct: 59 VNNLNAAQEKLADPNLDLEGEV-ALQAAIKFNGGGHIN 95
>SPAC1783.07c |pap1|caf3, caf3|transcription factor
Caf3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 552
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/31 (41%), Positives = 22/31 (70%)
Query: 382 LREEVANLSSAREKLRDRVTQLEDELRRLKE 412
L+E ++ + ++LR +V QLE+ELR LK+
Sbjct: 111 LKELHSSTTLENDQLRQKVRQLEEELRILKD 141
>SPBC32F12.08c |duo1||DASH complex subunit Duo1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 166
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/43 (32%), Positives = 25/43 (58%)
Query: 74 QTNQEHEVELELLREDNEQLVTQYEREKAARKYAEQKLLEAED 116
Q ++ ++EL+ +E EQ Q E A +K +Q+LL ++D
Sbjct: 91 QAEEQRKIELQQEQERLEQERRQKEEAIALQKQQQQRLLRSKD 133
>SPAC13A11.01c |rga8|SPAC2F7.18c|GTPase activating protein Rga8
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 777
Score = 27.9 bits (59), Expect = 8.3
Identities = 29/134 (21%), Positives = 55/134 (41%), Gaps = 10/134 (7%)
Query: 65 VLECLDSAYQTNQEHEVELELLREDNEQL---VTQYEREKAARKYAEQKLLEAEDH--YE 119
+ +CLD+ + N++ + L+L +E NE+ + + +E K E A + +E
Sbjct: 21 LFDCLDNGVEENEQVKNLLKLYKEANEEFGEKLQEITKECLKGKKPENTEDGATSNKAFE 80
Query: 120 GERKDLTGRLEALDSIVRMLELK-----HKNSLDHASXXXXXXXXXXXXYAKLHERYTEL 174
G R ++ + + I + LE K S+DH+ ++Y L
Sbjct: 81 GLRSEIANQGKQHIRIAKDLETLIIAPFSKMSIDHSQKLQTSQQVLTNQIKSYEKKYYTL 140
Query: 175 FKTHMDYMERTKLL 188
KT Y + + L
Sbjct: 141 KKTKSAYYNKCRNL 154
>SPAC1F8.03c |str3||siderophore-iron transporter Str3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 630
Score = 27.9 bits (59), Expect = 8.3
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Query: 4 DDSASSGYVTNETIYGTHEDS--HVVMSEKVQSLAGSIYQEFERMIARY 50
D+ SGY TNET Y ++S H +S K++++ SIYQ M Y
Sbjct: 39 DEEKGSGYNTNET-YSKMDNSLQHRGVS-KIEAVRDSIYQNKRGMYLAY 85
>SPBC11C11.08 |srp1||SR family protein Srp1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 275
Score = 27.9 bits (59), Expect = 8.3
Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 4/64 (6%)
Query: 747 EPEEPAADNDENPKESMVKNVEDEAENDGHDSPPLSSTPN-NVTEPSVSSPEPGLDAFAQ 805
E E+ +A N +E V N+E +N+ PP N + +P + PE A Q
Sbjct: 208 EVEQQSAPNSNGNEE--VNNLEPVGQNESKQEPPKEENSNVSQEQPEQAQPEVSA-ASEQ 264
Query: 806 EQSN 809
+SN
Sbjct: 265 PESN 268
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.313 0.128 0.367
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,598,995
Number of Sequences: 5004
Number of extensions: 183033
Number of successful extensions: 688
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 31
Number of HSP's that attempted gapping in prelim test: 633
Number of HSP's gapped (non-prelim): 82
length of query: 1113
length of database: 2,362,478
effective HSP length: 80
effective length of query: 1033
effective length of database: 1,962,158
effective search space: 2026909214
effective search space used: 2026909214
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 59 (27.9 bits)
- SilkBase 1999-2023 -