GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000602-TA|BGIBMGA000602-PA|IPR000494|EGF receptor, L
domain, IPR006211|Furin-like cysteine rich region, IPR001245|Tyrosine
protein kinase, IPR011009|Protein kinase-like, IPR009030|Growth
factor, receptor, IPR000719|Protein kinase, IPR008266|Tyrosine protein
kinase, active site, IPR006212|Furin-like repeat
         (1397 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...   153   6e-39
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    29   0.30 
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    29   0.30 
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    29   0.30 
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    29   0.30 
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    29   0.30 
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    29   0.30 
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    29   0.30 
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    29   0.30 
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           27   1.2  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    24   6.4  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
            kinase Torso-likeprotein protein.
          Length = 803

 Score =  153 bits (372), Expect = 6e-39
 Identities = 71/175 (40%), Positives = 116/175 (66%), Gaps = 4/175 (2%)

Query: 929  IGSKAFLNWCTQIARGMAYLEEKRLVHRDLAARNVLVQTPNSVKITDFGLAKLLDINEDE 988
            I  K  L+   Q+A GM +L + R+VHRDLAARNVLV   ++VK++DFGL++  D+ +D 
Sbjct: 589  IQPKHLLSIARQVALGMEHLAKTRVVHRDLAARNVLVCENHTVKVSDFGLSR--DVYQDN 646

Query: 989  Y--KAAGGKMPIKWLALECIQHRIFTHKSDVWAFGVTIWEILSYGARPYENISARNVPEL 1046
               K  GGK+P++W+ALE + H+ +T  SDVW+FGV +WEI++ G  PY  + +  + + 
Sbjct: 647  VYCKNGGGKLPVRWMALESLTHQRYTTYSDVWSFGVLLWEIVTLGGTPYVGVHSSELLDF 706

Query: 1047 IENGLKLPQPSICTLDIYCVMVSCWMLDADSRPTFKQLADTFAEMARDPGRYLVI 1101
            +++G +L +P+ C+ D+Y VM++CW     +RPTF +L+ +   +  +  +YL I
Sbjct: 707  LKSGNRLARPANCSPDLYAVMLNCWKECPKNRPTFTELSKSLEGLLENVAQYLQI 761



 Score = 63.3 bits (147), Expect = 1e-11
 Identities = 56/191 (29%), Positives = 95/191 (49%), Gaps = 16/191 (8%)

Query: 750 HANDIPTATARTSTVL-VIILVIASLFLAVLAIIGYNF-RQKAKAKKEAVKMTMVLTGCE 807
           H  DI   T  +     +++L+IA L   ++A +  N+ R K K + E  +    L   E
Sbjct: 364 HKTDINITTVPSEQQWGILVLIIAPLIATLIATVTVNYYRHKQKRRDERERYFKGLD--E 421

Query: 808 DNEPLRPTNVKPNLAKLRIVKEAELRR-----GGMLGFGAFGKVYKGVWVPEGENVKIPV 862
           +  P    N++ NL K  I  + EL        G++G GAFG + +  ++   E+ K  V
Sbjct: 422 EKLPESGENIEINLIKPDIFDQWELGPLKLSFQGVIGEGAFG-IVRRAFLDLKEDNKTQV 480

Query: 863 AIKVLKETTGANTSKEFLEEAYIMASV-EHPNLLQLLAVCMTNQM----MLITQLMPLGC 917
           A+K+LKE+  +   ++F +E  IM SV +HP ++ L+  C+T       +L+ +    G 
Sbjct: 481 AVKMLKESPTSEEIRQFTQEINIMKSVRQHPYIVSLIG-CVTEGRAEGPLLVVEYCSRGD 539

Query: 918 LVDYVRTHKEK 928
           L  Y+RT  +K
Sbjct: 540 LQTYLRTAWDK 550


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 28.7 bits (61), Expect = 0.30
 Identities = 22/77 (28%), Positives = 29/77 (37%), Gaps = 2/77 (2%)

Query: 225 QECPSMQIYNPTTYSWEPNPNGKYAYGATCVRNCPEHLLKDNGACVRSCPPNKTAVNGEC 284
           Q   S  + +P T +  P+ + KYA   +         L  NGA  RS PP  T  N   
Sbjct: 79  QRLASTHLQSPNTQT-HPSASCKYADSTSSTGVASPQDLSTNGAPPRSTPPLSTPSNSNA 137

Query: 285 IPCVG-TCPKTCRAEKP 300
               G T P +     P
Sbjct: 138 TKSSGLTSPLSVSTSPP 154


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 28.7 bits (61), Expect = 0.30
 Identities = 22/77 (28%), Positives = 29/77 (37%), Gaps = 2/77 (2%)

Query: 225 QECPSMQIYNPTTYSWEPNPNGKYAYGATCVRNCPEHLLKDNGACVRSCPPNKTAVNGEC 284
           Q   S  + +P T +  P+ + KYA   +         L  NGA  RS PP  T  N   
Sbjct: 79  QRLASTHLQSPNTQT-HPSASCKYADSTSSTGVASPQDLSTNGAPPRSTPPLSTPSNSNA 137

Query: 285 IPCVG-TCPKTCRAEKP 300
               G T P +     P
Sbjct: 138 TKSSGLTSPLSVSTSPP 154


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 28.7 bits (61), Expect = 0.30
 Identities = 22/77 (28%), Positives = 29/77 (37%), Gaps = 2/77 (2%)

Query: 225 QECPSMQIYNPTTYSWEPNPNGKYAYGATCVRNCPEHLLKDNGACVRSCPPNKTAVNGEC 284
           Q   S  + +P T +  P+ + KYA   +         L  NGA  RS PP  T  N   
Sbjct: 79  QRLASTHLQSPNTQT-HPSASCKYADSTSSTGVASPQDLSTNGAPPRSTPPLSTPSNSNA 137

Query: 285 IPCVG-TCPKTCRAEKP 300
               G T P +     P
Sbjct: 138 TKSSGLTSPLSVSTSPP 154


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 28.7 bits (61), Expect = 0.30
 Identities = 22/77 (28%), Positives = 29/77 (37%), Gaps = 2/77 (2%)

Query: 225 QECPSMQIYNPTTYSWEPNPNGKYAYGATCVRNCPEHLLKDNGACVRSCPPNKTAVNGEC 284
           Q   S  + +P T +  P+ + KYA   +         L  NGA  RS PP  T  N   
Sbjct: 79  QRLASTHLQSPNTQT-HPSASCKYADSTSSTGVASPQDLSTNGAPPRSTPPLSTPSNSNA 137

Query: 285 IPCVG-TCPKTCRAEKP 300
               G T P +     P
Sbjct: 138 TKSSGLTSPLSVSTSPP 154


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 28.7 bits (61), Expect = 0.30
 Identities = 22/77 (28%), Positives = 29/77 (37%), Gaps = 2/77 (2%)

Query: 225 QECPSMQIYNPTTYSWEPNPNGKYAYGATCVRNCPEHLLKDNGACVRSCPPNKTAVNGEC 284
           Q   S  + +P T +  P+ + KYA   +         L  NGA  RS PP  T  N   
Sbjct: 79  QRLASTHLQSPNTQT-HPSASCKYADSTSSTGVASPQDLSTNGAPPRSTPPLSTPSNSNA 137

Query: 285 IPCVG-TCPKTCRAEKP 300
               G T P +     P
Sbjct: 138 TKSSGLTSPLSVSTSPP 154


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 28.7 bits (61), Expect = 0.30
 Identities = 22/77 (28%), Positives = 29/77 (37%), Gaps = 2/77 (2%)

Query: 225 QECPSMQIYNPTTYSWEPNPNGKYAYGATCVRNCPEHLLKDNGACVRSCPPNKTAVNGEC 284
           Q   S  + +P T +  P+ + KYA   +         L  NGA  RS PP  T  N   
Sbjct: 35  QRLASTHLQSPNTQT-HPSASCKYADSTSSTGVASPQDLSTNGAPPRSTPPLSTPSNSNA 93

Query: 285 IPCVG-TCPKTCRAEKP 300
               G T P +     P
Sbjct: 94  TKSSGLTSPLSVSTSPP 110


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
           protein.
          Length = 157

 Score = 28.7 bits (61), Expect = 0.30
 Identities = 22/77 (28%), Positives = 29/77 (37%), Gaps = 2/77 (2%)

Query: 225 QECPSMQIYNPTTYSWEPNPNGKYAYGATCVRNCPEHLLKDNGACVRSCPPNKTAVNGEC 284
           Q   S  + +P T +  P+ + KYA   +         L  NGA  RS PP  T  N   
Sbjct: 79  QRLASTHLQSPNTQT-HPSASCKYADSTSSTGVASPQDLSTNGAPPRSTPPLSTPSNSNA 137

Query: 285 IPCVG-TCPKTCRAEKP 300
               G T P +     P
Sbjct: 138 TKSSGLTSPLSVSTSPP 154


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 28.7 bits (61), Expect = 0.30
 Identities = 22/77 (28%), Positives = 29/77 (37%), Gaps = 2/77 (2%)

Query: 225 QECPSMQIYNPTTYSWEPNPNGKYAYGATCVRNCPEHLLKDNGACVRSCPPNKTAVNGEC 284
           Q   S  + +P T +  P+ + KYA   +         L  NGA  RS PP  T  N   
Sbjct: 79  QRLASTHLQSPNTQT-HPSASCKYADSTSSTGVASPQDLSTNGAPPRSTPPLSTPSNSNA 137

Query: 285 IPCVG-TCPKTCRAEKP 300
               G T P +     P
Sbjct: 138 TKSSGLTSPLSVSTSPP 154


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 26.6 bits (56), Expect = 1.2
 Identities = 21/77 (27%), Positives = 28/77 (36%), Gaps = 2/77 (2%)

Query: 225 QECPSMQIYNPTTYSWEPNPNGKYAYGATCVRNCPEHLLKDNGACVRSCPPNKTAVNGEC 284
           Q      + +P T +  P+ + KYA   +         L  NGA  RS PP  T  N   
Sbjct: 79  QRLAPTHLQSPNTQT-HPSASCKYADSTSSTGVASPQDLSTNGAPPRSTPPLSTPSNSNA 137

Query: 285 IPCVG-TCPKTCRAEKP 300
               G T P +     P
Sbjct: 138 TKSSGLTSPLSVSTSPP 154


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 24.2 bits (50), Expect = 6.4
 Identities = 9/23 (39%), Positives = 10/23 (43%)

Query: 650 QVCNGFKRGDQCEDECPSDHFTD 672
           Q CNG  R   C+  C   H  D
Sbjct: 551 QFCNGDNRPADCQQNCMCTHKVD 573


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.318    0.135    0.424 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 352,579
Number of Sequences: 317
Number of extensions: 16685
Number of successful extensions: 66
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 38
Number of HSP's gapped (non-prelim): 27
length of query: 1397
length of database: 114,650
effective HSP length: 65
effective length of query: 1332
effective length of database: 94,045
effective search space: 125267940
effective search space used: 125267940
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 49 (23.8 bits)