GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000602-TA|BGIBMGA000602-PA|IPR000494|EGF receptor, L
domain, IPR006211|Furin-like cysteine rich region, IPR001245|Tyrosine
protein kinase, IPR011009|Protein kinase-like, IPR009030|Growth
factor, receptor, IPR000719|Protein kinase, IPR008266|Tyrosine protein
kinase, active site, IPR006212|Furin-like repeat
         (1397 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.   204   5e-54
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    59   2e-10
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                56   2e-09
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    48   4e-07
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    48   4e-07
AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C prot...    44   9e-06
AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II ...    40   1e-04
DQ288392-1|ABC41342.1|  120|Apis mellifera nanos protein.              26   2.5  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    25   3.3  
AY526236-1|AAS20469.1|   85|Apis mellifera epoxide hydrolase pro...    24   7.6  

>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score =  204 bits (497), Expect = 5e-54
 Identities = 109/262 (41%), Positives = 147/262 (56%), Gaps = 3/262 (1%)

Query: 837  MLGFGAFGKVYKG-VWVPEGENVKIPVAIKVLKETTGANTSKEFLEEAYIMASVEHPNLL 895
            ++G G FG V +G + +P     +I VAIK LK  +      +FL EA IM   EHPN++
Sbjct: 638  IIGGGEFGDVCRGKLKLPPDGRTEIDVAIKTLKPGSADKARNDFLTEASIMGQFEHPNVI 697

Query: 896  QLLAVCM-TNQMMLITQLMPLGCLVDYVRTHKEKIGSKAFLNWCTQIARGMAYLEEKRLV 954
             L  V   +N +M+IT+ M  G L  ++R +  K      +     IA GM YL E   V
Sbjct: 698  FLQGVVTKSNPVMIITEFMENGSLDTFLRANDGKFQVLQLVGMLRGIASGMQYLAEMNYV 757

Query: 955  HRDLAARNVLVQTPNSVKITDFGLAKLLD-INEDEYKAAGGKMPIKWLALECIQHRIFTH 1013
            HRDLAARNVLV      KI DFGL++ ++   E  Y   GGK+P++W A E I  R FT 
Sbjct: 758  HRDLAARNVLVNAALVCKIADFGLSREIESATEGAYTTRGGKIPVRWTAPEAIAFRKFTS 817

Query: 1014 KSDVWAFGVTIWEILSYGARPYENISARNVPELIENGLKLPQPSICTLDIYCVMVSCWML 1073
             SDVW+ G+  WE++SYG RPY N S ++V + IE G +LP P  C   IY +M+ CW  
Sbjct: 818  ASDVWSMGIVCWEVMSYGERPYWNWSNQDVIKSIEKGYRLPAPMDCPEAIYQLMLDCWQK 877

Query: 1074 DADSRPTFKQLADTFAEMARDP 1095
            +   RPTF  L  T  ++ R P
Sbjct: 878  ERTHRPTFANLTQTLDKLIRSP 899


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
            kinase foraging protein.
          Length = 678

 Score = 59.3 bits (137), Expect = 2e-10
 Identities = 56/233 (24%), Positives = 105/233 (45%), Gaps = 13/233 (5%)

Query: 823  KLRIVKEAELRRGGMLGFGAFGKVYKGVWVPEGENVKIPVAIKVLKETTGANTSKE--FL 880
            + R ++  +LR    LG G FG+V + V +  G++ +   A+K +K+     T ++   +
Sbjct: 358  EFRDLRLQDLRPLATLGVGGFGRV-ELVQIA-GDSSR-SFALKQMKKAQIVETRQQQHIM 414

Query: 881  EEAYIMASVEHPNLLQLLAVCMTNQMMLITQLMPLGCLVDYVRTHKEKI--GSKAFLNWC 938
             E  IM   +   +++L       + + +     LG  +  V   K     G+  F   C
Sbjct: 415  SEKRIMGEADCDFVVKLFKTFKDRKYLYMLMEACLGGELWTVLRDKGHFDDGTTRFYTAC 474

Query: 939  TQIARGMAYLEEKRLVHRDLAARNVLVQTPNSVKITDFGLAKLLDINEDEYKAAGGKMPI 998
              +     YL  + +++RDL   N+L+ +   VK+ DFG AK LD     +   G     
Sbjct: 475  --VVEAFDYLHSRNIIYRDLKPENLLLDSQGYVKLVDFGFAKRLDHGRKTWTFCGTP--- 529

Query: 999  KWLALECIQHRIFTHKSDVWAFGVTIWEILSYGARPYENISARNVPELIENGL 1051
            +++A E I ++     +D W+ GV ++E+L+ G  P+          +I  G+
Sbjct: 530  EYVAPEVILNKGHDISADYWSLGVLMFELLT-GTPPFTGGDPMKTYNIILKGI 581


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 56.0 bits (129), Expect = 2e-09
 Identities = 61/248 (24%), Positives = 111/248 (44%), Gaps = 24/248 (9%)

Query: 807  EDNEPLRPTNVK-PNLAKLRIVKEA-ELRRGGMLGFGAFGKVYKGVWVPEGENVKIPVAI 864
            E    L P N+  PN  K  I+K+   ++ G  LG G FG VYK ++  +GE V   + I
Sbjct: 42   ETKNQLSPFNIDTPNRQK--ILKDGFPIKCGTFLGSGGFGIVYKALY--KGEQVAAKI-I 96

Query: 865  KVLKETTGANTSKEFLEEAYIMASVEHPNLLQLLAVCMTNQMMLITQLMPLGCLVDYVRT 924
            +  K +   N+ K         + ++H N++++L +     + LIT  M L       R 
Sbjct: 97   QTEKYSNMLNSEKH-------ASFLKHSNIVKVLMIEQGASLSLIT--MELCGTTLQNRL 147

Query: 925  HKEKIGSKAFLNWCTQIARGMAYLEEKRLVHRDLAARNVLVQTPNSVKITDFGLAKLLDI 984
             +  +     +     I   + +     +VH D+  +N+L+      K+TDFG + L+  
Sbjct: 148  DEAILIKNERICILKSITCALQFCHNAGIVHADVKPKNILMSKNGQPKLTDFGSSVLIGA 207

Query: 985  -NE-DEYKAAGGKMPIKWLALECIQHRIFTHKSDVWAFGVTIWEILSYGARPYENISARN 1042
             NE D++    G     + A E I+    T  +D+++ G+  W++L +   P+  + +  
Sbjct: 208  PNEIDKFYGTPG-----YTAPEVIKQNRPTPAADIYSLGIVAWQML-FRKLPFAGLHSHT 261

Query: 1043 VPELIENG 1050
            +  L   G
Sbjct: 262  IIYLSAKG 269


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
            isoform B protein.
          Length = 931

 Score = 48.4 bits (110), Expect = 4e-07
 Identities = 47/166 (28%), Positives = 72/166 (43%), Gaps = 23/166 (13%)

Query: 930  GSKAFLNWCTQIA------RGMAYLEEKRLVHRDLAARNVLVQTPNSVKITDFGLAKLLD 983
            G +A L+W  +I        G+ YL  + LVHRD+  +NVL+   N  K+TDFG      
Sbjct: 689  GIRAGLSWLERIQIALDVLEGIRYLHSQGLVHRDVKLKNVLLDIENRAKLTDFGFC---- 744

Query: 984  INEDEYKAAGGKMPIKWLALECIQHRIFTHKSDVWAFGVTIWEILSYGAR-PYENISARN 1042
            I E     +    P+  +A E +    +    DV+AFG+  W + +   R PY      N
Sbjct: 745  ITEVMMLGSIVGTPVH-MAPELLSGH-YDSSVDVYAFGILFWYLCAGHVRLPYTFEQFHN 802

Query: 1043 VPELIENGLK-------LPQPSICTLDIYC--VMVSCWMLDADSRP 1079
              EL+   +K       +    + + D  C  +M  CW  +   RP
Sbjct: 803  -KELLWTSVKKALMIVGIRPERLPSFDDECWRLMEQCWSGEPSKRP 847


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
            isoform A protein.
          Length = 969

 Score = 48.4 bits (110), Expect = 4e-07
 Identities = 47/166 (28%), Positives = 72/166 (43%), Gaps = 23/166 (13%)

Query: 930  GSKAFLNWCTQIA------RGMAYLEEKRLVHRDLAARNVLVQTPNSVKITDFGLAKLLD 983
            G +A L+W  +I        G+ YL  + LVHRD+  +NVL+   N  K+TDFG      
Sbjct: 727  GIRAGLSWLERIQIALDVLEGIRYLHSQGLVHRDVKLKNVLLDIENRAKLTDFGFC---- 782

Query: 984  INEDEYKAAGGKMPIKWLALECIQHRIFTHKSDVWAFGVTIWEILSYGAR-PYENISARN 1042
            I E     +    P+  +A E +    +    DV+AFG+  W + +   R PY      N
Sbjct: 783  ITEVMMLGSIVGTPVH-MAPELLSGH-YDSSVDVYAFGILFWYLCAGHVRLPYTFEQFHN 840

Query: 1043 VPELIENGLK-------LPQPSICTLDIYC--VMVSCWMLDADSRP 1079
              EL+   +K       +    + + D  C  +M  CW  +   RP
Sbjct: 841  -KELLWTSVKKALMIVGIRPERLPSFDDECWRLMEQCWSGEPSKRP 885


>AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C
           protein.
          Length = 149

 Score = 44.0 bits (99), Expect = 9e-06
 Identities = 33/122 (27%), Positives = 61/122 (50%), Gaps = 5/122 (4%)

Query: 863 AIKVLKETT---GANTSKEFLEEAYIMASVEHPNLLQLLAVCMT-NQMMLITQLMPLGCL 918
           AIK+LK+       +     +E+  +  S + P L+QL +   T +++  + + +  G L
Sbjct: 13  AIKILKKDIIIQDDDVECTMVEKRVLALSTKPPFLVQLHSCFQTMDRLYFVMEYVNGGDL 72

Query: 919 VDYVRTHKEKIGSKAFLNWCTQIARGMAYLEEKRLVHRDLAARNVLVQTPNSVKITDFGL 978
           + Y      K      + + ++IA G+ +L  + +V+RDL   NVL+     +KI DFG+
Sbjct: 73  M-YQIQQCGKFKEPVAVFYASEIAIGLFFLHGRGIVYRDLKLDNVLLDQDGHIKIADFGM 131

Query: 979 AK 980
            K
Sbjct: 132 CK 133


>AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II
            protein.
          Length = 190

 Score = 39.9 bits (89), Expect = 1e-04
 Identities = 31/109 (28%), Positives = 54/109 (49%), Gaps = 7/109 (6%)

Query: 931  SKAFLNWCTQ-IARGMAYLEEKRLVHRDLAARNVLVQTP---NSVKITDFGLAKLLDINE 986
            S+A  + C Q I   + +     +VHRDL   N+L+ +     +VK+ DFGLA  +++  
Sbjct: 7    SEADASHCIQQILESVHHCHHNGVVHRDLKPENLLLASKAKGAAVKLADFGLA--IEVQG 64

Query: 987  DEYKAAGGKMPIKWLALECIQHRIFTHKSDVWAFGVTIWEILSYGARPY 1035
            +     G      +L+ E ++   +    D+WA GV ++ IL  G  P+
Sbjct: 65   EAQAWFGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILY-ILLVGYPPF 112


>DQ288392-1|ABC41342.1|  120|Apis mellifera nanos protein.
          Length = 120

 Score = 25.8 bits (54), Expect = 2.5
 Identities = 9/15 (60%), Positives = 12/15 (80%)

Query: 206 PLPTQCLACRNFYDE 220
           PLPT+C+ CRN  +E
Sbjct: 35  PLPTECVFCRNNGEE 49


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
            protein.
          Length = 1143

 Score = 25.4 bits (53), Expect = 3.3
 Identities = 7/17 (41%), Positives = 12/17 (70%)

Query: 1196 WDHEMLRYNNQLNPDGS 1212
            W+H+++ Y    NPDG+
Sbjct: 186  WNHQLISYAGYKNPDGT 202


>AY526236-1|AAS20469.1|   85|Apis mellifera epoxide hydrolase
           protein.
          Length = 85

 Score = 24.2 bits (50), Expect = 7.6
 Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)

Query: 340 ERYPKMEPDALEVFSTVREVTGYLNVQAHHPN 371
           E Y K  P + E+ S + E +GY ++QA  P+
Sbjct: 54  EHYSKFFPVS-EILSFLIEESGYFHIQATKPD 84


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.318    0.135    0.424 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 437,460
Number of Sequences: 429
Number of extensions: 20095
Number of successful extensions: 34
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 16
Number of HSP's gapped (non-prelim): 13
length of query: 1397
length of database: 140,377
effective HSP length: 66
effective length of query: 1331
effective length of database: 112,063
effective search space: 149155853
effective search space used: 149155853
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 49 (23.8 bits)