GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000601-TA|BGIBMGA000601-PA|IPR011009|Protein
kinase-like, IPR000719|Protein kinase, IPR008271|Serine/threonine
protein kinase, active site, IPR000472|TGF-beta receptor/activin
receptor, type I/II, IPR003605|TGF beta receptor, GS motif,
IPR002290|Serine/threonine protein kinase, IPR000333|Activin type II
receptor
         (477 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    52   7e-09

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 52.4 bits (120), Expect = 7e-09
 Identities = 60/223 (26%), Positives = 96/223 (43%), Gaps = 38/223 (17%)

Query: 255 DYHENGSLFDFLTAKSIDSNTLIKMSLSIATGLAHLHMDIVGTKGKPAIAHRDLKSKNIL 314
           D+H      DF+    I    L+ ++  +A G+ HL         K  + HRDL ++N+L
Sbjct: 577 DFHNMSFENDFI----IQPKHLLSIARQVALGMEHL--------AKTRVVHRDLAARNVL 624

Query: 315 VKSNLSCVIGDLGLAVRHNVSNDSVDVPSTNRVGTKRYMAPEVLDETMDTRQFDPYKRSD 374
           V  N +  + D GL+   +V  D+V   +       R+MA E L      +++  Y  SD
Sbjct: 625 VCENHTVKVSDFGLS--RDVYQDNVYCKNGGGKLPVRWMALESLTH----QRYTTY--SD 676

Query: 375 VYSFGLVLWEMARRCGNMPDDYQPPYYDCVPPDPALEDMRRVVCTEKRRPNVPNRWHSDP 434
           V+SFG++LWE+    G        PY   V     L+ ++        R   P     D 
Sbjct: 677 VWSFGVLLWEIVTLGGT-------PYVG-VHSSELLDFLK-----SGNRLARPANCSPD- 722

Query: 435 VLSGISKVMKECWYQNPAARLTALRIKKTLANVGTNGADYIKL 477
               +  VM  CW + P  R T   + K+L  +  N A Y+++
Sbjct: 723 ----LYAVMLNCWKECPKNRPTFTELSKSLEGLLENVAQYLQI 761


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.321    0.136    0.441 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,235
Number of Sequences: 317
Number of extensions: 5822
Number of successful extensions: 7
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 4
Number of HSP's gapped (non-prelim): 2
length of query: 477
length of database: 114,650
effective HSP length: 59
effective length of query: 418
effective length of database: 95,947
effective search space: 40105846
effective search space used: 40105846
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 45 (22.2 bits)