GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000601-TA|BGIBMGA000601-PA|IPR011009|Protein
kinase-like, IPR000719|Protein kinase, IPR008271|Serine/threonine
protein kinase, active site, IPR000472|TGF-beta receptor/activin
receptor, type I/II, IPR003605|TGF beta receptor, GS motif,
IPR002290|Serine/threonine protein kinase, IPR000333|Activin type II
receptor
         (477 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    63   4e-12
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                61   2e-11
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    42   1e-05
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    42   1e-05
AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II ...    33   0.007
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    28   0.15 
AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C prot...    28   0.15 
AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    23   7.4  

>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 63.3 bits (147), Expect = 4e-12
 Identities = 65/223 (29%), Positives = 100/223 (44%), Gaps = 34/223 (15%)

Query: 176 ARQIQLVDIIGKGRFGEVWRGRWR----GE---NVAVKIF----SSREECSWFREAEIYQ 224
           A  I +  IIG G FG+V RG+ +    G    +VA+K      + +    +  EA I  
Sbjct: 630 AGYITIEAIIGGGEFGDVCRGKLKLPPDGRTEIDVAIKTLKPGSADKARNDFLTEASIMG 689

Query: 225 TVMLRHENILGFIAADNKDNGTWTQLWLITDYHENGSLFDFLTAKS--IDSNTLIKMSLS 282
                H N++       K N     + +IT++ ENGSL  FL A         L+ M   
Sbjct: 690 --QFEHPNVIFLQGVVTKSN----PVMIITEFMENGSLDTFLRANDGKFQVLQLVGMLRG 743

Query: 283 IATGLAHLHMDIVGTKGKPAIAHRDLKSKNILVKSNLSCVIGDLGLAVRHNVSNDSVDVP 342
           IA+G+ +L         +    HRDL ++N+LV + L C I D GL+     + +     
Sbjct: 744 IASGMQYL--------AEMNYVHRDLAARNVLVNAALVCKIADFGLSREIESATEGAYTT 795

Query: 343 STNRVGTKRYMAPEVLDETMDTRQFDPYKRSDVYSFGLVLWEM 385
              ++   R+ APE +      R+F     SDV+S G+V WE+
Sbjct: 796 RGGKIPV-RWTAPEAI----AFRKFT--SASDVWSMGIVCWEV 831


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 60.9 bits (141), Expect = 2e-11
 Identities = 61/204 (29%), Positives = 91/204 (44%), Gaps = 26/204 (12%)

Query: 185 IGKGRFGEVWRGRWRGENVAVKIFSSREECSWFREAEIYQTVMLRHENILGFIAADNKDN 244
           +G G FG V++  ++GE VA KI  + E+ S    +E + +  L+H NI+  +  +    
Sbjct: 73  LGSGGFGIVYKALYKGEQVAAKIIQT-EKYSNMLNSEKHAS-FLKHSNIVKVLMIEQ--- 127

Query: 245 GTWTQLWLITDYHENGSLFDFLTAKSIDSNTLIKMSLSIATGLAHLHMDIVGTKGKPAIA 304
                L LIT      +L + L    +  N  I +  SI   L   H           I 
Sbjct: 128 --GASLSLITMELCGTTLQNRLDEAILIKNERICILKSITCALQFCH--------NAGIV 177

Query: 305 HRDLKSKNILVKSNLSCVIGDLGLAVRHNVSNDSVDVPSTNRVGTKRYMAPEVLDETMDT 364
           H D+K KNIL+  N    + D G +V     N+ +D       GT  Y APEV+      
Sbjct: 178 HADVKPKNILMSKNGQPKLTDFGSSVLIGAPNE-ID----KFYGTPGYTAPEVI------ 226

Query: 365 RQFDPYKRSDVYSFGLVLWEMARR 388
           +Q  P   +D+YS G+V W+M  R
Sbjct: 227 KQNRPTPAADIYSLGIVAWQMLFR 250


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 41.5 bits (93), Expect = 1e-05
 Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 22/121 (18%)

Query: 277 IKMSLSIATGLAHLHMDIVGTKGKPAIAHRDLKSKNILVKSNLSCVIGDLGLAVRHNVSN 336
           I+++L +  G+ +LH           + HRD+K KN+L+       + D G  +   +  
Sbjct: 700 IQIALDVLEGIRYLHSQ--------GLVHRDVKLKNVLLDIENRAKLTDFGFCITEVMML 751

Query: 337 DSVDVPSTNRVGTKRYMAPEVLDETMDTRQFDPYKRSDVYSFGLVLWEMARRCGNMPDDY 396
            S+       VGT  +MAPE+L    D+         DVY+FG++ W +      +P  +
Sbjct: 752 GSI-------VGTPVHMAPELLSGHYDS-------SVDVYAFGILFWYLCAGHVRLPYTF 797

Query: 397 Q 397
           +
Sbjct: 798 E 798


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 41.5 bits (93), Expect = 1e-05
 Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 22/121 (18%)

Query: 277 IKMSLSIATGLAHLHMDIVGTKGKPAIAHRDLKSKNILVKSNLSCVIGDLGLAVRHNVSN 336
           I+++L +  G+ +LH           + HRD+K KN+L+       + D G  +   +  
Sbjct: 738 IQIALDVLEGIRYLHSQ--------GLVHRDVKLKNVLLDIENRAKLTDFGFCITEVMML 789

Query: 337 DSVDVPSTNRVGTKRYMAPEVLDETMDTRQFDPYKRSDVYSFGLVLWEMARRCGNMPDDY 396
            S+       VGT  +MAPE+L    D+         DVY+FG++ W +      +P  +
Sbjct: 790 GSI-------VGTPVHMAPELLSGHYDS-------SVDVYAFGILFWYLCAGHVRLPYTF 835

Query: 397 Q 397
           +
Sbjct: 836 E 836


>AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II
           protein.
          Length = 190

 Score = 32.7 bits (71), Expect = 0.007
 Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 15/85 (17%)

Query: 303 IAHRDLKSKNILVKS---NLSCVIGDLGLAVRHNVSNDSVDVPSTNRVGTKRYMAPEVLD 359
           + HRDLK +N+L+ S     +  + D GLA+   V  ++         GT  Y++PEVL 
Sbjct: 30  VVHRDLKPENLLLASKAKGAAVKLADFGLAI--EVQGEA--QAWFGFAGTPGYLSPEVLK 85

Query: 360 ETMDTRQFDPY-KRSDVYSFGLVLW 383
           +       +PY K  D+++ G++L+
Sbjct: 86  K-------EPYGKPVDIWACGVILY 103


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 28.3 bits (60), Expect = 0.15
 Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 5/56 (8%)

Query: 303 IAHRDLKSKNILVKSNLSCVIGDLGLAVRHNVSNDSVDVPSTNRVGTKRYMAPEVL 358
           I +RDLK +N+L+ S     + D G A R +         +    GT  Y+APEV+
Sbjct: 487 IIYRDLKPENLLLDSQGYVKLVDFGFAKRLDHGR-----KTWTFCGTPEYVAPEVI 537


>AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C
           protein.
          Length = 149

 Score = 28.3 bits (60), Expect = 0.15
 Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 10/93 (10%)

Query: 246 TWTQLWLITDYHENGSL-FDFLTAKSIDSNTLIKMSLSIATGLAHLHMDIVGTKGKPAIA 304
           T  +L+ + +Y   G L +             +  +  IA GL  LH       G+  I 
Sbjct: 56  TMDRLYFVMEYVNGGDLMYQIQQCGKFKEPVAVFYASEIAIGLFFLH-------GR-GIV 107

Query: 305 HRDLKSKNILVKSNLSCVIGDLGLAVRHNVSND 337
           +RDLK  N+L+  +    I D G+  +  +S D
Sbjct: 108 YRDLKLDNVLLDQDGHIKIADFGMC-KEGISGD 139


>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 22.6 bits (46), Expect = 7.4
 Identities = 12/28 (42%), Positives = 14/28 (50%)

Query: 395 DYQPPYYDCVPPDPALEDMRRVVCTEKR 422
           DYQP Y+     + A E  RR V T  R
Sbjct: 435 DYQPIYFVADSFEDAKEKFRRWVSTMSR 462


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.321    0.136    0.441 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,046
Number of Sequences: 429
Number of extensions: 7133
Number of successful extensions: 25
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 8
Number of HSP's gapped (non-prelim): 8
length of query: 477
length of database: 140,377
effective HSP length: 60
effective length of query: 417
effective length of database: 114,637
effective search space: 47803629
effective search space used: 47803629
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 45 (22.2 bits)