Silkworm BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000600-TA|BGIBMGA000600-PA|IPR008973|C2
calcium/lipid-binding region, CaLB, IPR002048|Calcium-binding EF-hand,
IPR000008|C2 calcium-dependent membrane targeting, IPR000980|SH2
motif, IPR001452|Src homology-3,
IPR000909|Phosphatidylinositol-specific phospholipase C, X region,
IPR001711|Phosphatidylinositol-specific phospholipase C, Y domain,
IPR001849|Pleckstrin-like, IPR001192|Phosphoinositide-specific
phospholipase C, C-terminal (PLC),
IPR013841|Phosphatidylinositol-specific phospholipase C, X and Y boxes
         (1201 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    25   2.8  
DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    25   3.7  
AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic ac...    25   3.7  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    25   4.9  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    25   4.9  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    25   4.9  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    25   4.9  

>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 25.4 bits (53), Expect = 2.8
 Identities = 8/21 (38%), Positives = 14/21 (66%)

Query: 144 SYPLQIERWLRKEFYSIENSH 164
           +YP  ++RW  K F +IE ++
Sbjct: 70  NYPFDVDRWRDKTFVTIERNN 90


>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 25.0 bits (52), Expect = 3.7
 Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 3/34 (8%)

Query: 591 QGKVNHCRIKLKQERGVTKFYLIDSM---CFDSL 621
           +G++ HC   +  E G+  F LID     C++SL
Sbjct: 311 RGELGHCTASVMDENGLQFFNLIDQNAVGCWNSL 344


>AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha-3 protein.
          Length = 537

 Score = 25.0 bits (52), Expect = 3.7
 Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 3/37 (8%)

Query: 302 SQYDKVTQDMTRPLSHYWISSSHNT---YLTGDQFSS 335
           SQY  + +D  R + H  ++ S NT   YL+ D  S+
Sbjct: 414 SQYKNIREDDARHIPHASVTDSENTVPRYLSPDVISA 450


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 24.6 bits (51), Expect = 4.9
 Identities = 12/37 (32%), Positives = 22/37 (59%), Gaps = 1/37 (2%)

Query: 42  RALCVRRET-HQVLWSRINAPQRQGYEGALDIRDVKE 77
           + LC + E   ++L + I  P    ++G LD++DV+E
Sbjct: 263 KKLCPQEEACFRLLMNDILRPYVPEFKGVLDVKDVEE 299


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 24.6 bits (51), Expect = 4.9
 Identities = 12/37 (32%), Positives = 22/37 (59%), Gaps = 1/37 (2%)

Query: 42  RALCVRRET-HQVLWSRINAPQRQGYEGALDIRDVKE 77
           + LC + E   ++L + I  P    ++G LD++DV+E
Sbjct: 178 KKLCPQEEACFRLLMNDILRPYVPEFKGVLDVKDVEE 214


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 24.6 bits (51), Expect = 4.9
 Identities = 12/37 (32%), Positives = 22/37 (59%), Gaps = 1/37 (2%)

Query: 42  RALCVRRET-HQVLWSRINAPQRQGYEGALDIRDVKE 77
           + LC + E   ++L + I  P    ++G LD++DV+E
Sbjct: 497 KKLCPQEEACFRLLMNDILRPYVPEFKGVLDVKDVEE 533


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 24.6 bits (51), Expect = 4.9
 Identities = 11/32 (34%), Positives = 14/32 (43%)

Query: 1125 PLWNDICEFEVANPELALIRFVVQDEDIFGEP 1156
            P   D+C        LAL+ F V    + GEP
Sbjct: 24   PQLTDVCSASNGELFLALLNFFVATSPVIGEP 55


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.320    0.136    0.416 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 340,062
Number of Sequences: 429
Number of extensions: 14734
Number of successful extensions: 39
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 36
Number of HSP's gapped (non-prelim): 7
length of query: 1201
length of database: 140,377
effective HSP length: 66
effective length of query: 1135
effective length of database: 112,063
effective search space: 127191505
effective search space used: 127191505
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 49 (23.8 bits)