Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000599-TA|BGIBMGA000599-PA|IPR011009|Protein
kinase-like, IPR000719|Protein kinase
(617 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_34807| Best HMM Match : zf-CCCH (HMM E-Value=4.6e-07) 214 2e-55
SB_54934| Best HMM Match : No HMM Matches (HMM E-Value=.) 144 2e-34
SB_28982| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.39
SB_17501| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.90
SB_23777| Best HMM Match : Pkinase (HMM E-Value=0.065) 33 0.90
SB_17071| Best HMM Match : Pkinase (HMM E-Value=0.065) 33 0.90
SB_27678| Best HMM Match : Pkinase (HMM E-Value=0) 32 1.6
SB_34303| Best HMM Match : Pkinase (HMM E-Value=0) 31 2.1
SB_22843| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.7
SB_18146| Best HMM Match : Pkinase (HMM E-Value=0) 31 2.7
SB_11202| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.7
SB_8354| Best HMM Match : Pkinase (HMM E-Value=6.3e-15) 30 4.8
SB_19291| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 6.3
SB_17656| Best HMM Match : TIR (HMM E-Value=1.3) 30 6.3
SB_36849| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 6.3
SB_26127| Best HMM Match : Pkinase (HMM E-Value=5.3e-10) 30 6.3
SB_26833| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.4
>SB_34807| Best HMM Match : zf-CCCH (HMM E-Value=4.6e-07)
Length = 505
Score = 214 bits (522), Expect = 2e-55
Identities = 119/298 (39%), Positives = 177/298 (59%), Gaps = 23/298 (7%)
Query: 193 HALVLVYQYHPAAVTLMNKYLXXXXXXXXXXXXXYHDPFSSDPDA--PRPYTHQKNAMLR 250
++LV VY YHP A TL++++ P ++D P P R
Sbjct: 187 NSLVFVYDYHPGAETLLSRHFSGPDSTL---------PVNADGSLAFPAPNRAGMPGANR 237
Query: 251 AVACGALLPEAVLWSLLVQLTAGLRAIHTAGLACRSLEPNKVIMNG-CRVRIAWCGAADA 309
+ L+PE ++WS ++QL++ LRAIH+AGL CR ++P+K+++ G R+RI CG D
Sbjct: 238 GGSRHGLMPERLIWSYIIQLSSALRAIHSAGLPCRMIDPSKILLIGNSRLRINGCGIFDI 297
Query: 310 LH---SNTNDVV--QAQQDDXXXXXXXXXX-XXC---RTIHCDNLAASMELVARTYSADL 360
L SN+++ + QQ+D C ++I +++ S+E VA YS+DL
Sbjct: 298 LSFDPSNSSNAMIPHFQQEDLTSLGKLVLALASCYSLQSIQREHIQQSLEYVAMNYSSDL 357
Query: 361 KNLILYLLSSSPAR--RSVIDLMPMIGARFYTQVEALERRADAFEDQLSQEIDNXXXXXX 418
KNL++YLLS+ +SV D+MPMIGARFYTQ+EA + + D E +L++E++N
Sbjct: 358 KNLVIYLLSNQMTTHLKSVNDIMPMIGARFYTQLEAAQVKCDVMEGELAKEMENGRLLRL 417
Query: 419 XXXXXXVNERPELNLDPAWSETGDRYMLKLFRDYLFHSVTTDGRPWLDQAHLTHCLNQ 476
VNERPEL +DP+WSETGDRY+LKLFRD++FH VT G P +D +H+ CLN+
Sbjct: 418 LTKLGVVNERPELGMDPSWSETGDRYLLKLFRDHVFHQVTDAGTPVVDLSHVVTCLNK 475
Score = 50.0 bits (114), Expect = 6e-06
Identities = 23/60 (38%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Query: 80 MSTSYRATNRQNGDYVALRRLHSYTSPASKRL---EMWKQIDHPNIVRLEEYFSTKAFND 136
++T Y+A N ++G LRR+H + +K + + WK+I H N+V L E F++KAF D
Sbjct: 127 ITTCYKAINSKDGLLYVLRRVHGFRLVNAKSMVIVDQWKKISHSNLVSLREVFTSKAFGD 186
>SB_54934| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 125
Score = 144 bits (349), Expect = 2e-34
Identities = 66/123 (53%), Positives = 89/123 (72%), Gaps = 2/123 (1%)
Query: 356 YSADLKNLILYLLSSSPAR--RSVIDLMPMIGARFYTQVEALERRADAFEDQLSQEIDNX 413
YS+DLKNL++YLLS+ +SV D+MPMIGARFYTQ+EA + + D E +L++E++N
Sbjct: 3 YSSDLKNLVIYLLSNQMTTHLKSVNDIMPMIGARFYTQLEAAQVKCDVMEGELAKEMENG 62
Query: 414 XXXXXXXXXXXVNERPELNLDPAWSETGDRYMLKLFRDYLFHSVTTDGRPWLDQAHLTHC 473
VNERPEL +DP+WSETGDRY+LKLFRD++FH VT G P +D +H+ C
Sbjct: 63 RLLRLLTKLGVVNERPELGMDPSWSETGDRYLLKLFRDHVFHQVTDAGTPVVDLSHVVTC 122
Query: 474 LNQ 476
LN+
Sbjct: 123 LNK 125
>SB_28982| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1287
Score = 33.9 bits (74), Expect = 0.39
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 257 LLPEAVLWSLLVQLTAGLRAIHTAGLACRSLEPNKVIMNGCR-VRIAWCGAA 307
LLPE+V+ +++ Q+ GL IH G R ++P ++ G V+IA G A
Sbjct: 62 LLPESVIRNVIYQILQGLAFIHKHGYFHRDMKPENLLCTGHELVKIADFGLA 113
>SB_17501| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 819
Score = 32.7 bits (71), Expect = 0.90
Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 7/79 (8%)
Query: 60 PDSVDMYAELVPLEGAVTHSMSTSYRATNRQNGDYVALRRLHSYTSPASKRLEM------ 113
PD +Y ++ P E + Y +RQ+G VA++ + P + ++
Sbjct: 516 PDISQLY-QVFPDEILGSGQFGIVYGGVHRQSGREVAVKVIDKLRFPTKQEAQLKNEVAI 574
Query: 114 WKQIDHPNIVRLEEYFSTK 132
KQ++HP +V LE+ F T+
Sbjct: 575 LKQLNHPGMVTLEQMFETQ 593
>SB_23777| Best HMM Match : Pkinase (HMM E-Value=0.065)
Length = 97
Score = 32.7 bits (71), Expect = 0.90
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 6/60 (10%)
Query: 79 SMSTSYRATNRQNGDYVALRR-LHSYTSPASKRL-----EMWKQIDHPNIVRLEEYFSTK 132
S ++ +++ G VA+++ + S P K++ +M KQ+ HPN+V L E F K
Sbjct: 14 SYGVVFKCRHKETGQIVAIKKFVESEDDPLIKKIAMREVKMLKQLKHPNLVNLLEVFKRK 73
>SB_17071| Best HMM Match : Pkinase (HMM E-Value=0.065)
Length = 97
Score = 32.7 bits (71), Expect = 0.90
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 6/60 (10%)
Query: 79 SMSTSYRATNRQNGDYVALRR-LHSYTSPASKRL-----EMWKQIDHPNIVRLEEYFSTK 132
S ++ +++ G VA+++ + S P K++ +M KQ+ HPN+V L E F K
Sbjct: 14 SYGVVFKCRHKETGQIVAIKKFVESEDDPLIKKIAMREVKMLKQLKHPNLVNLLEVFKRK 73
>SB_27678| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 641
Score = 31.9 bits (69), Expect = 1.6
Identities = 26/95 (27%), Positives = 42/95 (44%), Gaps = 6/95 (6%)
Query: 79 SMSTSYRATNRQNGDYVALRRLHSYTSPASK-----RLEMWKQIDHPNIVRLEEYF-STK 132
S + Y+ + + G VA L S + + EM KQ+ HPNIV+ +++ S +
Sbjct: 90 SFKSVYQGLDTETGVAVAWCELQDKYSRSERARFREEAEMLKQLQHPNIVKFHDFWESRQ 149
Query: 133 AFNDICRMNCVIMLRYRAPTVPHQKKCNGVKSQDL 167
D R+ V L + K+ GVK + L
Sbjct: 150 TRTDKKRVMLVTELMTSGTLKTYLKRFKGVKEKIL 184
>SB_34303| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 226
Score = 31.5 bits (68), Expect = 2.1
Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 10/63 (15%)
Query: 77 THSMSTSYRATNRQN-GDYVALRRLHSYTS----PAS--KRLEMWKQID---HPNIVRLE 126
T + T Y+A + N G +VAL+R+ S P S + + + KQID HPN+VRL
Sbjct: 13 TGAYGTVYKAKDLLNDGKFVALKRVRIQNSEEGMPLSTIREIALLKQIDNFAHPNVVRLL 72
Query: 127 EYF 129
+ F
Sbjct: 73 DIF 75
>SB_22843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1138
Score = 31.1 bits (67), Expect = 2.7
Identities = 14/39 (35%), Positives = 23/39 (58%)
Query: 258 LPEAVLWSLLVQLTAGLRAIHTAGLACRSLEPNKVIMNG 296
LPEA + ++ L IHT G+ L+P+KV+++G
Sbjct: 93 LPEATVKHFGAEIAKALFYIHTLGIVYCDLKPSKVLLDG 131
>SB_18146| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 888
Score = 31.1 bits (67), Expect = 2.7
Identities = 14/39 (35%), Positives = 23/39 (58%)
Query: 258 LPEAVLWSLLVQLTAGLRAIHTAGLACRSLEPNKVIMNG 296
LPEA + ++ L IHT G+ L+P+KV+++G
Sbjct: 93 LPEATVKHFGAEIAKALFYIHTLGIVYCDLKPSKVLLDG 131
>SB_11202| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1822
Score = 31.1 bits (67), Expect = 2.7
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 263 LWSLLVQLTAGLRAIHTAGLACRSLEPNKVIMN-GCRVRIAWCGAADALHSNTNDVVQAQ 321
+W LL ++ GL IH+ G+ R L+P + ++ G +++ G A H T + A+
Sbjct: 1076 VWRLLREIVEGLAHIHSQGIIHRDLKPVNIFLDAGGHIKLGDFGLA-TTHDKTRGGLTAE 1134
>SB_8354| Best HMM Match : Pkinase (HMM E-Value=6.3e-15)
Length = 280
Score = 30.3 bits (65), Expect = 4.8
Identities = 15/42 (35%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Query: 267 LVQLTAGLRAIHTAGLACRSLEPNKVIMN-GCRVRIAWCGAA 307
L Q+ GL+ IH+A + R L+P+ +++N C ++I G A
Sbjct: 19 LYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLA 60
>SB_19291| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1258
Score = 29.9 bits (64), Expect = 6.3
Identities = 11/33 (33%), Positives = 20/33 (60%)
Query: 260 EAVLWSLLVQLTAGLRAIHTAGLACRSLEPNKV 292
E +W+ L+ LT GL+ +H +G+ ++P V
Sbjct: 574 EREVWNFLLDLTLGLKHLHDSGMVHMDIKPANV 606
>SB_17656| Best HMM Match : TIR (HMM E-Value=1.3)
Length = 719
Score = 29.9 bits (64), Expect = 6.3
Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 9/85 (10%)
Query: 50 QPDLNQFPDIPDSVDM----YAELVPLEGAVTHS--MSTSYRATNRQNGDYVALRRLHSY 103
Q N +P++PDS M +A + LEG T + ++ Y + +LHS+
Sbjct: 335 QQAYNPYPNVPDSTPMNDFIFAVMTALEGEKTEEEREKAEIQVLTKELEQYKS--KLHSF 392
Query: 104 -TSPASKRLEMWKQIDHPNIVRLEE 127
P K E+W + P +R +
Sbjct: 393 PPPPRDKSKEVWVPLPSPEQLRTND 417
>SB_36849| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 634
Score = 29.9 bits (64), Expect = 6.3
Identities = 14/51 (27%), Positives = 29/51 (56%)
Query: 79 SMSTSYRATNRQNGDYVALRRLHSYTSPASKRLEMWKQIDHPNIVRLEEYF 129
S Y+A + + VA++++ ++ L++ +++DH NIVRL +F
Sbjct: 41 SFGVVYQARMCDSTELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRWFF 91
>SB_26127| Best HMM Match : Pkinase (HMM E-Value=5.3e-10)
Length = 460
Score = 29.9 bits (64), Expect = 6.3
Identities = 15/41 (36%), Positives = 23/41 (56%)
Query: 255 GALLPEAVLWSLLVQLTAGLRAIHTAGLACRSLEPNKVIMN 295
G L EA L LL+QL GL+ IH+ L ++P + ++
Sbjct: 232 GERLSEADLKMLLLQLAQGLKYIHSLHLVHMDIKPGNIFIS 272
>SB_26833| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 854
Score = 29.5 bits (63), Expect = 8.4
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 255 GALLPEAVLWSLLVQLTAGLRAIH-TAGLACRSLEPNKVIM 294
G E +W + +Q+ GLR IH + R L PN +++
Sbjct: 298 GTRFSEERIWHIFIQIVLGLRYIHKEKHIVHRDLTPNNIML 338
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.320 0.135 0.412
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,800,235
Number of Sequences: 59808
Number of extensions: 773702
Number of successful extensions: 1300
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 1282
Number of HSP's gapped (non-prelim): 20
length of query: 617
length of database: 16,821,457
effective HSP length: 86
effective length of query: 531
effective length of database: 11,677,969
effective search space: 6201001539
effective search space used: 6201001539
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 63 (29.5 bits)
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