GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000599-TA|BGIBMGA000599-PA|IPR011009|Protein
kinase-like, IPR000719|Protein kinase
         (617 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dp...    28   0.64 
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    25   4.5  
AY873992-1|AAW71999.1|  259|Anopheles gambiae nanos protein.           25   5.9  
DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.            25   7.8  

>AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dpp
           protein.
          Length = 474

 Score = 28.3 bits (60), Expect = 0.64
 Identities = 13/23 (56%), Positives = 16/23 (69%)

Query: 96  ALRRLHSYTSPASKRLEMWKQID 118
           +L  L S+TSPA K+L  WKQ D
Sbjct: 16  SLNSLFSFTSPAVKKLLGWKQGD 38


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 25.4 bits (53), Expect = 4.5
 Identities = 10/23 (43%), Positives = 15/23 (65%)

Query: 156 QKKCNGVKSQDLGGQYERLHDLE 178
           QK+     SQD+G   ER+H+L+
Sbjct: 462 QKRIKAELSQDVGTSKERIHELQ 484


>AY873992-1|AAW71999.1|  259|Anopheles gambiae nanos protein.
          Length = 259

 Score = 25.0 bits (52), Expect = 5.9
 Identities = 15/70 (21%), Positives = 31/70 (44%)

Query: 307 ADALHSNTNDVVQAQQDDXXXXXXXXXXXXCRTIHCDNLAASMELVARTYSADLKNLILY 366
           A+  H+ T D ++   +              +  H   +  S  + A   +A+LKN++L 
Sbjct: 68  ANKWHNTTLDEIREDFEANGTTCELEEEVYLQPKHAPEMDGSELMEAVDVAAELKNMVLQ 127

Query: 367 LLSSSPARRS 376
            +S+ P ++S
Sbjct: 128 DISNQPKQQS 137


>DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.
          Length = 847

 Score = 24.6 bits (51), Expect = 7.8
 Identities = 10/24 (41%), Positives = 17/24 (70%)

Query: 173 RLHDLEKPYAYIVIGLLQVLHALV 196
           R+ +LEK Y + + G L+++ ALV
Sbjct: 386 RISELEKDYLHTLDGALELVRALV 409


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.320    0.135    0.412 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 625,031
Number of Sequences: 2123
Number of extensions: 24422
Number of successful extensions: 26
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 23
Number of HSP's gapped (non-prelim): 4
length of query: 617
length of database: 516,269
effective HSP length: 68
effective length of query: 549
effective length of database: 371,905
effective search space: 204175845
effective search space used: 204175845
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 51 (24.6 bits)