GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000597-TA|BGIBMGA000597-PA|IPR004142|Ndr
         (209 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    25   1.3  
AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    25   1.3  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    25   1.3  
AF487781-1|AAL96668.1|  533|Anopheles gambiae cytochrome P450 CY...    23   6.7  

>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 25.4 bits (53), Expect = 1.3
 Identities = 15/50 (30%), Positives = 20/50 (40%)

Query: 118  PSNLSMFIEAYVRRSDLGICRNADTIKVPVLNITGALSPHVDDTVTFNGR 167
            P +L    +    RS  GIC ++DT+    L      S     T T N R
Sbjct: 3011 PGSLQQQQQQQDARSSTGICTSSDTLSQQTLQAPKGESLSSSTTTTTNNR 3060


>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 25.4 bits (53), Expect = 1.3
 Identities = 10/34 (29%), Positives = 19/34 (55%)

Query: 108 YKNYFTRNVNPSNLSMFIEAYVRRSDLGICRNAD 141
           Y+ Y T N++      F++A+ R  D G  R+++
Sbjct: 439 YRRYLTANLSSDLSGDFVDAFFRGPDSGTDRHSE 472


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 25.4 bits (53), Expect = 1.3
 Identities = 10/34 (29%), Positives = 19/34 (55%)

Query: 108 YKNYFTRNVNPSNLSMFIEAYVRRSDLGICRNAD 141
           Y+ Y T N++      F++A+ R  D G  R+++
Sbjct: 439 YRRYLTANLSSDLSGDFVDAFFRGPDSGTDRHSE 472


>AF487781-1|AAL96668.1|  533|Anopheles gambiae cytochrome P450
           CYP9L1 protein protein.
          Length = 533

 Score = 23.0 bits (47), Expect = 6.7
 Identities = 10/31 (32%), Positives = 18/31 (58%)

Query: 24  FIGFGVGAGANVLARFALIHPKKVDALTLIN 54
           ++ FG+G    + +RFAL+  K +    L+N
Sbjct: 465 YLPFGIGPRNCIASRFALMEVKAIVYHILLN 495


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.322    0.137    0.425 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 222,272
Number of Sequences: 2123
Number of extensions: 9068
Number of successful extensions: 12
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 8
Number of HSP's gapped (non-prelim): 4
length of query: 209
length of database: 516,269
effective HSP length: 61
effective length of query: 148
effective length of database: 386,766
effective search space: 57241368
effective search space used: 57241368
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 46 (22.6 bits)