GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000596-TA|BGIBMGA000596-PA|IPR004908|ATPase, V1 complex,
subunit H
         (478 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF017062-1|AAC47144.2|  649|Anopheles gambiae soluble guanylyl c...    26   2.6  
AY183376-1|AAO24766.1|  128|Anopheles gambiae cytochrome b5 prot...    24   7.8  
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    24   7.8  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    24   7.8  

>AF017062-1|AAC47144.2|  649|Anopheles gambiae soluble guanylyl
           cyclase beta subunit protein.
          Length = 649

 Score = 25.8 bits (54), Expect = 2.6
 Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 5/57 (8%)

Query: 306 KQLSILEQKRSDDEDIMNDVEYLNERLQASVQDLSSFDQYATEVKSGRLEWSPVHKS 362
           + L +L +K   +  +  ++E L +RLQ + +DL S  Q     K+ RL +S + K+
Sbjct: 429 RDLVLLSEKFEAEYKLTTNLEILTDRLQQTYRDLESEKQ-----KTDRLLYSVLPKT 480


>AY183376-1|AAO24766.1|  128|Anopheles gambiae cytochrome b5
           protein.
          Length = 128

 Score = 24.2 bits (50), Expect = 7.8
 Identities = 7/31 (22%), Positives = 19/31 (61%)

Query: 395 VVLAVACYDIGEYVRHYPRGKHIIEQLGGKQ 425
           +V+    YD+ E++  +P G+ ++ +  G++
Sbjct: 23  IVIHNDIYDVTEFLNEHPGGEEVLLEQAGRE 53


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1977

 Score = 24.2 bits (50), Expect = 7.8
 Identities = 13/40 (32%), Positives = 21/40 (52%)

Query: 309 SILEQKRSDDEDIMNDVEYLNERLQASVQDLSSFDQYATE 348
           S ++   S D +   D+  +++RL       SSF Q+ATE
Sbjct: 715 SSIDSNLSSDRETSPDLPSIDDRLLHRGVTASSFIQHATE 754


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1978

 Score = 24.2 bits (50), Expect = 7.8
 Identities = 13/40 (32%), Positives = 21/40 (52%)

Query: 309 SILEQKRSDDEDIMNDVEYLNERLQASVQDLSSFDQYATE 348
           S ++   S D +   D+  +++RL       SSF Q+ATE
Sbjct: 715 SSIDSNLSSDRETSPDLPSIDDRLLHRGVTASSFIQHATE 754


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.322    0.135    0.396 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 458,542
Number of Sequences: 2123
Number of extensions: 17821
Number of successful extensions: 42
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 38
Number of HSP's gapped (non-prelim): 4
length of query: 478
length of database: 516,269
effective HSP length: 67
effective length of query: 411
effective length of database: 374,028
effective search space: 153725508
effective search space used: 153725508
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 50 (24.2 bits)