Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000596-TA|BGIBMGA000596-PA|IPR004908|ATPase, V1 complex,
subunit H
(478 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U50199-6|AAA91266.1| 470|Caenorhabditis elegans Vacuolar h atpa... 483 e-137
U41109-12|AAB37043.1| 451|Caenorhabditis elegans Hypothetical p... 361 e-100
L12018-11|AAA65467.1| 348|Caenorhabditis elegans Hypothetical p... 31 1.4
AL033514-16|CAA22102.1| 272|Caenorhabditis elegans Hypothetical... 31 2.4
AF003141-8|AAK21480.1| 141|Caenorhabditis elegans Hypothetical ... 30 3.1
Z54342-11|CAA91146.1| 502|Caenorhabditis elegans Hypothetical p... 29 5.5
U58760-5|AAK31464.1| 1076|Caenorhabditis elegans Hypothetical pr... 29 5.5
AF144639-1|AAD44756.1| 552|Caenorhabditis elegans sphingosine-1... 29 5.5
AF100673-6|AAC69001.1| 552|Caenorhabditis elegans Sphingosine p... 29 5.5
AL034393-11|CAA22324.2| 2417|Caenorhabditis elegans Hypothetical... 29 7.2
AJ250261-1|CAB59919.1| 2417|Caenorhabditis elegans hypothetical ... 29 7.2
Z92813-3|CAB07287.1| 621|Caenorhabditis elegans Hypothetical pr... 29 9.5
Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical p... 29 9.5
Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical pr... 29 9.5
J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy ch... 29 9.5
AF003390-3|AAB54272.1| 1308|Caenorhabditis elegans Hypothetical ... 29 9.5
>U50199-6|AAA91266.1| 470|Caenorhabditis elegans Vacuolar h atpase
protein 15 protein.
Length = 470
Score = 483 bits (1192), Expect = e-137
Identities = 229/449 (51%), Positives = 316/449 (70%), Gaps = 9/449 (2%)
Query: 25 DMIAATSVLQIRASEIRQTRINWQSYLQSQMITQRDHDFIVNLDQRGQKDLPDK-----N 79
DM+ ATS LQ+ A E+R + NW SY +SQMI + D++FI + + K+ D+ N
Sbjct: 13 DMLNATSRLQLEAQELRNNKPNWGSYFRSQMIQEDDYNFITSFENAKSKEERDQVLAANN 72
Query: 80 PDA-CAEVFLNLLTHISKDHTIQYILVLIDDILSEDKSRVKIFRET--KFSGNVWQPFLN 136
+ A+ NL+T ++KD ++Y+L L DD+L EDKSRV++F + VW +L
Sbjct: 73 ANGQAAKTMANLITQVAKDQNVRYVLTLFDDMLQEDKSRVELFHSAAARQKRTVWSQYLG 132
Query: 137 LLNRQDEFVQHMTARIIAKLACWHPQLMDKSDLHFYLSWLKDQLKTNN-NDYIQSVARCL 195
+L RQD F+ + + IIAKLAC+ M+ DL +Y S+LK+QLK + NDY+ + ARCL
Sbjct: 133 ILQRQDNFIVNQMSSIIAKLACFGTTRMEGQDLQYYFSFLKEQLKNSTTNDYMNTTARCL 192
Query: 196 QMMLRIDEYRFAFLSVDGISTLLSILASRVNFQVQYQLVFCLWVLTFNPLLAEKMNKFNV 255
QMMLR DEYR F+ DG+ TL++ L + NFQ+QYQL+F +W LTFN +A K +
Sbjct: 193 QMMLRHDEYRHEFVDSDGVQTLVTALNGKTNFQLQYQLIFAVWCLTFNADIARKAPSLGL 252
Query: 256 IPILADILSDSVKEKVTRIVLAVFRNLIEKPEDQQVAKEHCIAMVQCKVLKQLSILEQKR 315
I L DILS+S KEKV RI+LA F N++ K ++++V +E + MVQCK LK L +++ K+
Sbjct: 253 IQALGDILSESTKEKVIRIILASFVNILSKVDEREVKREAALQMVQCKTLKTLELMDAKK 312
Query: 316 SDDEDIMNDVEYLNERLQASVQDLSSFDQYATEVKSGRLEWSPVHKSAKFWRENAARLNE 375
DD D+ +DV++L E L SV DLSS+D+Y +EV+SGRL+WSPVHKS KFWRENA++ N+
Sbjct: 313 YDDPDLEDDVKFLTEELTLSVHDLSSYDEYYSEVRSGRLQWSPVHKSEKFWRENASKFND 372
Query: 376 RGQELLRTLVHLLEKSRDPVVLAVACYDIGEYVRHYPRGKHIIEQLGGKQRVMYLLSHDD 435
+ E+++ L+ LLE S DP++L VA +DIGEYVRHYPRGK ++EQ GK VM LL+ +D
Sbjct: 373 KQFEVVKILIKLLESSHDPLILCVASHDIGEYVRHYPRGKTVVEQYQGKAAVMRLLTAED 432
Query: 436 PNVRYEALLAVQKLMVHNWEYLGKQLEKE 464
PNVRY ALLAVQKLMVHNWEYLGKQL+ +
Sbjct: 433 PNVRYHALLAVQKLMVHNWEYLGKQLDSD 461
>U41109-12|AAB37043.1| 451|Caenorhabditis elegans Hypothetical
protein F52E1.10 protein.
Length = 451
Score = 361 bits (889), Expect = e-100
Identities = 182/437 (41%), Positives = 275/437 (62%), Gaps = 9/437 (2%)
Query: 34 QIRASEIRQTRINWQSYLQSQMITQRDHDFIVNLDQRGQK----DLPDKNPDACAEVFLN 89
Q A ++R + NW + +++MI Q D+DFIV Q + + + F++
Sbjct: 15 QKEADKVRAMKTNWGLFTRTRMIAQSDYDFIVTYQQAENEAERSTVLSVFKEKAVYAFVH 74
Query: 90 LLTHISKDHTIQYILVLIDDILSEDKSRVKIFRETK--FSGNVWQPFLNLLNRQDEFVQH 147
L++ ISKD ++Y L LIDD+L ED +R IF + + + F+ LL+RQD+++ H
Sbjct: 75 LMSQISKDDYVRYTLTLIDDMLREDVTRTIIFEDVAVLLKRSPFSFFMGLLHRQDQYIVH 134
Query: 148 MTARIIAKLACWHPQLMDKSDLHFYLSWLKDQL-KTNNNDYIQSVARCLQMMLRIDEYRF 206
+T I+ K+A + + +L + + LK+ + + NNDYI + RC+Q + R D YR
Sbjct: 135 ITFSILTKMAVFGNIKLSGDELDYCMGSLKEAMNRGTNNDYIVTAVRCMQTLFRFDPYRV 194
Query: 207 AFLSVDGISTLLSILAS--RVNFQVQYQLVFCLWVLTFNPLLAEKMNKFNVIPILADILS 264
+F++++G +L L S + FQ+QYQ++FC+W+LTFN AE N+I ++ IL
Sbjct: 195 SFVNINGYDSLTHALYSTRKCGFQIQYQIIFCMWLLTFNGHAAEVALSGNLIQTISGILG 254
Query: 265 DSVKEKVTRIVLAVFRNLIEKPEDQQVAKEHCIAMVQCKVLKQLSILEQKRSDDEDIMND 324
+ KEKV RIV++ RNLI +D + K+ + M+Q ++ +L LE ++ D D++ D
Sbjct: 255 NCQKEKVIRIVVSTLRNLITSNQDVYMKKQAALQMIQNRIPTKLDHLENRKFTDVDLVED 314
Query: 325 VEYLNERLQASVQDLSSFDQYATEVKSGRLEWSPVHKSAKFWRENAARLNERGQELLRTL 384
+ YL L+ VQ L+SFD+Y E++ G L WSP HK FW ENA RLN+ QELL+ L
Sbjct: 315 MVYLQTELKKVVQVLTSFDEYENELRQGSLHWSPAHKCEVFWNENAHRLNDNRQELLKLL 374
Query: 385 VHLLEKSRDPVVLAVACYDIGEYVRHYPRGKHIIEQLGGKQRVMYLLSHDDPNVRYEALL 444
V +LEKS DP+VL VA +DIGE+VR+YPRGK +EQLGGK+ +M LL+ DPNVRY ALL
Sbjct: 375 VAMLEKSNDPLVLCVAAHDIGEFVRYYPRGKLKVEQLGGKEAMMRLLTVKDPNVRYHALL 434
Query: 445 AVQKLMVHNWEYLGKQL 461
A QKLM++NW+ LG ++
Sbjct: 435 AAQKLMINNWKDLGLEI 451
>L12018-11|AAA65467.1| 348|Caenorhabditis elegans Hypothetical
protein F22B7.1 protein.
Length = 348
Score = 31.5 bits (68), Expect = 1.4
Identities = 24/91 (26%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
Query: 264 SDSVKEKVTRIVLAVFRNLIEKP-EDQQVAKEHCIAMVQCKVLKQLS-ILEQKRSDDEDI 321
SD K + L +F +++ P ED++ K A V+ K ++L +++ K + +
Sbjct: 63 SDKPKFNLLETYLPLFIFVLDLPTEDRETLK----AYVKDKTYEKLKYVIDSKVKMNRNE 118
Query: 322 MNDVEYLNERLQASVQDLSSFDQYATEVKSG 352
N + +NE L S+ +L FD+ +V +G
Sbjct: 119 KNVLGRINESLVQSIDNLEHFDEITVDVVNG 149
>AL033514-16|CAA22102.1| 272|Caenorhabditis elegans Hypothetical
protein Y75B8A.14 protein.
Length = 272
Score = 30.7 bits (66), Expect = 2.4
Identities = 36/183 (19%), Positives = 75/183 (40%), Gaps = 9/183 (4%)
Query: 173 LSWLKDQLKTNNNDYIQSVARCLQMMLRIDEYRFAFLSVDGIST----LLSILASRVNFQ 228
L WL D+L +DY V C + VD + + + S+ NF
Sbjct: 87 LEWLHDELDEGEDDYF--VIDCPGQIELYSHLPVMRQIVDALKSWDFNVCSVFLIDTNFV 144
Query: 229 VQYQLVFCLWVLTFNPLLAEKMNKFNVIPILADILSDSVKEKVTRIVLAVFRNLIEKPED 288
+ + + + ++A + NV+ + D+LS+ K+ V + R+++++ E
Sbjct: 145 LDAEKFISGALTALSAMVAIETPAINVLTKM-DLLSERNKQLVDEFLETDTRSIVDQDET 203
Query: 289 QQVAKEHCIAMVQCKVLKQLSILE--QKRSDDEDIMNDVEYLNERLQASVQDLSSFDQYA 346
+K + +VL+ SI++ +DE+ ++ + + +DL D Y
Sbjct: 204 VWNSKHRKLTRTIAQVLEDYSIVKFVPLNCEDEESIDQLLLTIDTTIQYGEDLEVKDHYP 263
Query: 347 TEV 349
E+
Sbjct: 264 EEL 266
>AF003141-8|AAK21480.1| 141|Caenorhabditis elegans Hypothetical
protein W02D3.1 protein.
Length = 141
Score = 30.3 bits (65), Expect = 3.1
Identities = 11/37 (29%), Positives = 22/37 (59%)
Query: 395 VVLAVACYDIGEYVRHYPRGKHIIEQLGGKQRVMYLL 431
+V++ YD+ +++ +P G+ +I QL GK + L
Sbjct: 26 IVISGKVYDVTKFLNEHPGGEEVITQLAGKDATVGFL 62
>Z54342-11|CAA91146.1| 502|Caenorhabditis elegans Hypothetical
protein C08H9.5 protein.
Length = 502
Score = 29.5 bits (63), Expect = 5.5
Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 5/70 (7%)
Query: 131 WQPFLNLLNRQDEFVQ--HMTARI--IAKLACWHPQLMDKSDLHFYLSWLKDQLKTNNND 186
W+ L+ LN Q H A I + KL CW + ++ + + + +LKT +N+
Sbjct: 413 WKYVLSYLNEGKRLAQPAHADAEIYNVMKL-CWDLDMNSRTTFLDCIEFFEKELKTTSNE 471
Query: 187 YIQSVARCLQ 196
Y + R L+
Sbjct: 472 YFLDLTRKLR 481
>U58760-5|AAK31464.1| 1076|Caenorhabditis elegans Hypothetical
protein C27A2.1 protein.
Length = 1076
Score = 29.5 bits (63), Expect = 5.5
Identities = 14/71 (19%), Positives = 33/71 (46%)
Query: 294 EHCIAMVQCKVLKQLSILEQKRSDDEDIMNDVEYLNERLQASVQDLSSFDQYATEVKSGR 353
E + + K+ +Q D E ++ RLQ +V L+ ++++ +E+KS
Sbjct: 316 EDMMQRAKAKLESAKKAADQHEKDVEKARKMIDQARARLQEAVDTLNGYEEFQSEMKSLE 375
Query: 354 LEWSPVHKSAK 364
++S + ++
Sbjct: 376 QKYSTAERDSR 386
>AF144639-1|AAD44756.1| 552|Caenorhabditis elegans
sphingosine-1-phosphate lyase protein.
Length = 552
Score = 29.5 bits (63), Expect = 5.5
Identities = 24/96 (25%), Positives = 44/96 (45%), Gaps = 4/96 (4%)
Query: 384 LVHLLEKSRDPVVLAVACYDIGEYVRHYPRGKHIIEQ--LGGKQRVMYLLSHDDPNVRYE 441
+VHL KS DP++ + Y + +R P + IE+ K +++ + DD + ++
Sbjct: 48 VVHLYRKSEDPILKRMGAY-VFSLLRKLPAVRDKIEKELAAEKPKLIESIHKDDKDKQFI 106
Query: 442 ALLAVQKLMVHNWEYLGKQLEK-EQIDKQAGTVVGA 476
+ L + L + L K+ E + G V GA
Sbjct: 107 STLPIAPLSQDSIMELAKKYEDYNTFNIDGGRVSGA 142
>AF100673-6|AAC69001.1| 552|Caenorhabditis elegans Sphingosine
phosphate lyase protein1 protein.
Length = 552
Score = 29.5 bits (63), Expect = 5.5
Identities = 24/96 (25%), Positives = 44/96 (45%), Gaps = 4/96 (4%)
Query: 384 LVHLLEKSRDPVVLAVACYDIGEYVRHYPRGKHIIEQ--LGGKQRVMYLLSHDDPNVRYE 441
+VHL KS DP++ + Y + +R P + IE+ K +++ + DD + ++
Sbjct: 48 VVHLYRKSEDPILKRMGAY-VFSLLRKLPAVRDKIEKELAAEKPKLIESIHKDDKDKQFI 106
Query: 442 ALLAVQKLMVHNWEYLGKQLEK-EQIDKQAGTVVGA 476
+ L + L + L K+ E + G V GA
Sbjct: 107 STLPIAPLSQDSIMELAKKYEDYNTFNIDGGRVSGA 142
>AL034393-11|CAA22324.2| 2417|Caenorhabditis elegans Hypothetical
protein Y18D10A.13 protein.
Length = 2417
Score = 29.1 bits (62), Expect = 7.2
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Query: 143 EFVQHMTARIIAKLACWHPQLMDKSDLHFYLSWLK-DQLKTNNNDYIQSVARCLQMMLRI 201
+ V HM A + A L+ + L F ++ D N D++Q + RCL ++LR
Sbjct: 227 DHVNHMVAALCAVADDTGSPLVQRYLLDFLVAAFPLDSTNLTNEDFVQLLRRCLFVVLRR 286
Query: 202 D 202
D
Sbjct: 287 D 287
>AJ250261-1|CAB59919.1| 2417|Caenorhabditis elegans hypothetical
protein protein.
Length = 2417
Score = 29.1 bits (62), Expect = 7.2
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Query: 143 EFVQHMTARIIAKLACWHPQLMDKSDLHFYLSWLK-DQLKTNNNDYIQSVARCLQMMLRI 201
+ V HM A + A L+ + L F ++ D N D++Q + RCL ++LR
Sbjct: 227 DHVNHMVAALCAVADDTGSPLVQRYLLDFLVAAFPLDSTNLTNEDFVQLLRRCLFVVLRR 286
Query: 202 D 202
D
Sbjct: 287 D 287
>Z92813-3|CAB07287.1| 621|Caenorhabditis elegans Hypothetical
protein T28A8.3 protein.
Length = 621
Score = 28.7 bits (61), Expect = 9.5
Identities = 15/56 (26%), Positives = 28/56 (50%)
Query: 352 GRLEWSPVHKSAKFWRENAARLNERGQELLRTLVHLLEKSRDPVVLAVACYDIGEY 407
G+L+ VH + + + +L+R + L+EK++D +V AC + EY
Sbjct: 112 GKLKLEAVHSHSARMKRMCFLQVKGSADLVRFMDFLVEKTKDTIVPVAACKVLTEY 167
>Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical
protein F11C3.3 protein.
Length = 1963
Score = 28.7 bits (61), Expect = 9.5
Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Query: 277 AVFRNLIEKPEDQQVAKEHCIAMVQCK---VLKQLSILEQKRSDDEDIMNDVEYLNERLQ 333
++F NL E + Q E +A ++ + KQLS L + +D+ED DV+ ++++
Sbjct: 895 SLFTNL-ESTKTQLSDAEERLAKLEAQQKDASKQLSELNDQLADNEDRTADVQRAKKKIE 953
Query: 334 ASVQDL 339
A V+ L
Sbjct: 954 AEVEAL 959
>Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical
protein F11C3.3 protein.
Length = 1963
Score = 28.7 bits (61), Expect = 9.5
Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Query: 277 AVFRNLIEKPEDQQVAKEHCIAMVQCK---VLKQLSILEQKRSDDEDIMNDVEYLNERLQ 333
++F NL E + Q E +A ++ + KQLS L + +D+ED DV+ ++++
Sbjct: 895 SLFTNL-ESTKTQLSDAEERLAKLEAQQKDASKQLSELNDQLADNEDRTADVQRAKKKIE 953
Query: 334 ASVQDL 339
A V+ L
Sbjct: 954 AEVEAL 959
>J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy chain
protein.
Length = 1966
Score = 28.7 bits (61), Expect = 9.5
Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Query: 277 AVFRNLIEKPEDQQVAKEHCIAMVQCK---VLKQLSILEQKRSDDEDIMNDVEYLNERLQ 333
++F NL E + Q E +A ++ + KQLS L + +D+ED DV+ ++++
Sbjct: 898 SLFTNL-ESTKTQLSDAEERLAKLEAQQKDASKQLSELNDQLADNEDRTADVQRAKKKIE 956
Query: 334 ASVQDL 339
A V+ L
Sbjct: 957 AEVEAL 962
>AF003390-3|AAB54272.1| 1308|Caenorhabditis elegans Hypothetical
protein R155.2 protein.
Length = 1308
Score = 28.7 bits (61), Expect = 9.5
Identities = 15/45 (33%), Positives = 24/45 (53%)
Query: 166 KSDLHFYLSWLKDQLKTNNNDYIQSVARCLQMMLRIDEYRFAFLS 210
K DL+++LS + D T++ D +Q V + + R D F LS
Sbjct: 244 KKDLNYFLSEMNDFNTTSDLDNLQRVISAIALCKRFDPTPFKSLS 288
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.322 0.135 0.396
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,386,162
Number of Sequences: 27539
Number of extensions: 471453
Number of successful extensions: 1349
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 1336
Number of HSP's gapped (non-prelim): 17
length of query: 478
length of database: 12,573,161
effective HSP length: 84
effective length of query: 394
effective length of database: 10,259,885
effective search space: 4042394690
effective search space used: 4042394690
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 61 (28.7 bits)
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