GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000595-TA|BGIBMGA000595-PA|IPR004142|Ndr
         (54 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ989011-1|ABK97612.1|  467|Anopheles gambiae gustatory receptor...    21   4.4  
AY659929-1|AAT51797.1|  140|Anopheles gambiae lysozyme c-2 protein.    21   5.9  
AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.           20   7.7  

>DQ989011-1|ABK97612.1|  467|Anopheles gambiae gustatory receptor 22
           protein.
          Length = 467

 Score = 21.0 bits (42), Expect = 4.4
 Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 1/35 (2%)

Query: 7   LSYKLIYKDASFQPFFGYVDMRALLENFC-VYHVN 40
           LS   +  D  F   F Y  + A+L  FC ++ VN
Sbjct: 219 LSQYYLQPDFQFCHTFAYYHIIAMLNGFCSLWFVN 253


>AY659929-1|AAT51797.1|  140|Anopheles gambiae lysozyme c-2 protein.
          Length = 140

 Score = 20.6 bits (41), Expect = 5.9
 Identities = 6/17 (35%), Positives = 11/17 (64%)

Query: 10  KLIYKDASFQPFFGYVD 26
           K++Y    F  ++G+VD
Sbjct: 110 KMVYSHHGFNAWYGWVD 126


>AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.
          Length = 897

 Score = 20.2 bits (40), Expect = 7.7
 Identities = 6/13 (46%), Positives = 9/13 (69%)

Query: 40  NAPGQEEGAPSLP 52
           N  G+E G P++P
Sbjct: 244 NGVGEESGCPTIP 256


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.320    0.137    0.417 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,237
Number of Sequences: 2123
Number of extensions: 2015
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of query: 54
length of database: 516,269
effective HSP length: 33
effective length of query: 21
effective length of database: 446,210
effective search space:  9370410
effective search space used:  9370410
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.3 bits)
S2: 40 (20.2 bits)