Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000595-TA|BGIBMGA000595-PA|IPR004142|Ndr
(54 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC093038-1|AAH93038.1| 357|Homo sapiens NDRG family member 2 pr... 49 3e-06
BC011240-1|AAH11240.1| 360|Homo sapiens NDRG2 protein protein. 49 3e-06
BC010458-1|AAH10458.1| 357|Homo sapiens NDRG family member 2 pr... 49 3e-06
AY028430-1|AAK50340.1| 357|Homo sapiens N-myc downstream regula... 49 3e-06
AL132768-3|CAI21463.1| 388|Homo sapiens NDRG family member 3 pr... 49 3e-06
AL132768-2|CAM28251.1| 363|Homo sapiens NDRG family member 3 pr... 49 3e-06
AL132768-1|CAI21461.1| 375|Homo sapiens NDRG family member 3 pr... 49 3e-06
AL031662-6|CAI21402.1| 187|Homo sapiens NDRG family member 3 pr... 49 3e-06
AL031662-5|CAI21399.1| 375|Homo sapiens NDRG family member 3 pr... 49 3e-06
AL031662-4|CAM45843.1| 363|Homo sapiens NDRG family member 3 pr... 49 3e-06
AL031662-3|CAI21401.1| 388|Homo sapiens NDRG family member 3 pr... 49 3e-06
AF308609-1|AAL08807.1| 375|Homo sapiens NDR1-related developmen... 49 3e-06
AF304051-1|AAL08624.1| 371|Homo sapiens NDR1-related protein ND... 49 3e-06
AF251054-1|AAK34944.1| 363|Homo sapiens NDR3 protein. 49 3e-06
AF159092-1|AAD43131.2| 357|Homo sapiens syld709613 protein prot... 49 3e-06
AF087872-1|AAM10500.1| 356|Homo sapiens cytoplasmic protein Ndr... 49 3e-06
AB044943-1|BAB20067.1| 375|Homo sapiens NDRG3 protein. 49 3e-06
AB033074-1|BAA86562.1| 368|Homo sapiens KIAA1248 protein protein. 49 3e-06
AK027665-1|BAB55277.1| 363|Homo sapiens protein ( Homo sapiens ... 47 1e-05
X92845-1|CAA63430.1| 394|Homo sapiens Drg1 protein. 46 3e-05
D87953-1|BAA13505.1| 394|Homo sapiens RTP protein. 46 3e-05
CR456842-1|CAG33123.1| 394|Homo sapiens NDRG1 protein. 46 3e-05
BC003175-1|AAH03175.1| 394|Homo sapiens N-myc downstream regula... 46 3e-05
AK223542-1|BAD97262.1| 394|Homo sapiens N-myc downstream regula... 46 3e-05
AF004162-1|AAC13419.1| 394|Homo sapiens nickel-specific inducti... 46 3e-05
AY277597-1|AAQ18036.1| 394|Homo sapiens transformation-related ... 44 8e-05
BC011795-1|AAH11795.1| 339|Homo sapiens NDRG4 protein protein. 41 5e-04
AK131248-1|BAD18428.1| 357|Homo sapiens protein ( Homo sapiens ... 41 5e-04
AK126574-1|BAC86600.1| 391|Homo sapiens . protein. 41 5e-04
AF308608-1|AAL08806.1| 339|Homo sapiens development-related pro... 41 5e-04
AB044947-3|BAB20073.1| 352|Homo sapiens NDRG4-H protein. 41 5e-04
AB044947-2|BAB20072.1| 339|Homo sapiens NDRG4-Bvar protein. 41 5e-04
AB044947-1|BAB20071.1| 371|Homo sapiens NDRG4-B protein. 41 5e-04
AB044946-1|BAB20070.1| 371|Homo sapiens NDRG4-H protein. 41 5e-04
AB044945-1|BAB20069.1| 352|Homo sapiens NDRG4-Bvar protein. 41 5e-04
AB044944-1|BAB20068.1| 339|Homo sapiens NDRG4-B protein. 41 5e-04
AB033006-1|BAA86494.2| 360|Homo sapiens KIAA1180 protein protein. 41 5e-04
AB021172-1|BAB20288.1| 371|Homo sapiens SMAP-8 protein. 41 5e-04
BC032376-1|AAH32376.1| 509|Homo sapiens PHF17 protein protein. 30 1.3
AK127326-1|BAC86931.1| 830|Homo sapiens protein ( Homo sapiens ... 30 1.3
AK027620-1|BAB55239.1| 509|Homo sapiens protein ( Homo sapiens ... 30 1.3
AF520952-1|AAM95612.1| 509|Homo sapiens PHD protein Jade-1 prot... 30 1.3
AC108024-1|AAY40997.1| 327|Homo sapiens unknown protein. 30 1.3
>BC093038-1|AAH93038.1| 357|Homo sapiens NDRG family member 2
protein.
Length = 357
Score = 48.8 bits (111), Expect = 3e-06
Identities = 22/42 (52%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Query: 11 LIYKDASFQPFFGYVDMRALLENFCVYHVNAPGQEEGAPSLP 52
L YK FQP F + DM+ +++NF HV+APG EEGAP P
Sbjct: 59 LNYKSC-FQPLFQFEDMQEIIQNFVRVHVDAPGMEEGAPVFP 99
>BC011240-1|AAH11240.1| 360|Homo sapiens NDRG2 protein protein.
Length = 360
Score = 48.8 bits (111), Expect = 3e-06
Identities = 22/42 (52%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Query: 11 LIYKDASFQPFFGYVDMRALLENFCVYHVNAPGQEEGAPSLP 52
L YK FQP F + DM+ +++NF HV+APG EEGAP P
Sbjct: 73 LNYKSC-FQPLFQFEDMQEIIQNFVRVHVDAPGMEEGAPVFP 113
>BC010458-1|AAH10458.1| 357|Homo sapiens NDRG family member 2
protein.
Length = 357
Score = 48.8 bits (111), Expect = 3e-06
Identities = 22/42 (52%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Query: 11 LIYKDASFQPFFGYVDMRALLENFCVYHVNAPGQEEGAPSLP 52
L YK FQP F + DM+ +++NF HV+APG EEGAP P
Sbjct: 59 LNYKSC-FQPLFQFEDMQEIIQNFVRVHVDAPGMEEGAPVFP 99
>AY028430-1|AAK50340.1| 357|Homo sapiens N-myc downstream
regulator 2 protein.
Length = 357
Score = 48.8 bits (111), Expect = 3e-06
Identities = 22/42 (52%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Query: 11 LIYKDASFQPFFGYVDMRALLENFCVYHVNAPGQEEGAPSLP 52
L YK FQP F + DM+ +++NF HV+APG EEGAP P
Sbjct: 59 LNYKSC-FQPLFQFEDMQEIIQNFVRVHVDAPGMEEGAPVFP 99
>AL132768-3|CAI21463.1| 388|Homo sapiens NDRG family member 3
protein.
Length = 388
Score = 48.8 bits (111), Expect = 3e-06
Identities = 19/35 (54%), Positives = 26/35 (74%)
Query: 18 FQPFFGYVDMRALLENFCVYHVNAPGQEEGAPSLP 52
F FF + DM+ + ++F V HV+APGQ+EGAPS P
Sbjct: 71 FNAFFNFEDMQEITQHFAVCHVDAPGQQEGAPSFP 105
>AL132768-2|CAM28251.1| 363|Homo sapiens NDRG family member 3
protein.
Length = 363
Score = 48.8 bits (111), Expect = 3e-06
Identities = 19/35 (54%), Positives = 26/35 (74%)
Query: 18 FQPFFGYVDMRALLENFCVYHVNAPGQEEGAPSLP 52
F FF + DM+ + ++F V HV+APGQ+EGAPS P
Sbjct: 59 FNAFFNFEDMQEITQHFAVCHVDAPGQQEGAPSFP 93
>AL132768-1|CAI21461.1| 375|Homo sapiens NDRG family member 3
protein.
Length = 375
Score = 48.8 bits (111), Expect = 3e-06
Identities = 19/35 (54%), Positives = 26/35 (74%)
Query: 18 FQPFFGYVDMRALLENFCVYHVNAPGQEEGAPSLP 52
F FF + DM+ + ++F V HV+APGQ+EGAPS P
Sbjct: 71 FNAFFNFEDMQEITQHFAVCHVDAPGQQEGAPSFP 105
>AL031662-6|CAI21402.1| 187|Homo sapiens NDRG family member 3
protein.
Length = 187
Score = 48.8 bits (111), Expect = 3e-06
Identities = 19/35 (54%), Positives = 26/35 (74%)
Query: 18 FQPFFGYVDMRALLENFCVYHVNAPGQEEGAPSLP 52
F FF + DM+ + ++F V HV+APGQ+EGAPS P
Sbjct: 62 FNAFFNFEDMQEITQHFAVCHVDAPGQQEGAPSFP 96
>AL031662-5|CAI21399.1| 375|Homo sapiens NDRG family member 3
protein.
Length = 375
Score = 48.8 bits (111), Expect = 3e-06
Identities = 19/35 (54%), Positives = 26/35 (74%)
Query: 18 FQPFFGYVDMRALLENFCVYHVNAPGQEEGAPSLP 52
F FF + DM+ + ++F V HV+APGQ+EGAPS P
Sbjct: 71 FNAFFNFEDMQEITQHFAVCHVDAPGQQEGAPSFP 105
>AL031662-4|CAM45843.1| 363|Homo sapiens NDRG family member 3
protein.
Length = 363
Score = 48.8 bits (111), Expect = 3e-06
Identities = 19/35 (54%), Positives = 26/35 (74%)
Query: 18 FQPFFGYVDMRALLENFCVYHVNAPGQEEGAPSLP 52
F FF + DM+ + ++F V HV+APGQ+EGAPS P
Sbjct: 59 FNAFFNFEDMQEITQHFAVCHVDAPGQQEGAPSFP 93
>AL031662-3|CAI21401.1| 388|Homo sapiens NDRG family member 3
protein.
Length = 388
Score = 48.8 bits (111), Expect = 3e-06
Identities = 19/35 (54%), Positives = 26/35 (74%)
Query: 18 FQPFFGYVDMRALLENFCVYHVNAPGQEEGAPSLP 52
F FF + DM+ + ++F V HV+APGQ+EGAPS P
Sbjct: 71 FNAFFNFEDMQEITQHFAVCHVDAPGQQEGAPSFP 105
>AF308609-1|AAL08807.1| 375|Homo sapiens NDR1-related development
protein NDR3 protein.
Length = 375
Score = 48.8 bits (111), Expect = 3e-06
Identities = 19/35 (54%), Positives = 26/35 (74%)
Query: 18 FQPFFGYVDMRALLENFCVYHVNAPGQEEGAPSLP 52
F FF + DM+ + ++F V HV+APGQ+EGAPS P
Sbjct: 71 FNAFFNFEDMQEITQHFAVCHVDAPGQQEGAPSFP 105
>AF304051-1|AAL08624.1| 371|Homo sapiens NDR1-related protein NDR2
protein.
Length = 371
Score = 48.8 bits (111), Expect = 3e-06
Identities = 22/42 (52%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Query: 11 LIYKDASFQPFFGYVDMRALLENFCVYHVNAPGQEEGAPSLP 52
L YK FQP F + DM+ +++NF HV+APG EEGAP P
Sbjct: 73 LNYKSC-FQPLFQFEDMQEIIQNFVRVHVDAPGMEEGAPVFP 113
>AF251054-1|AAK34944.1| 363|Homo sapiens NDR3 protein.
Length = 363
Score = 48.8 bits (111), Expect = 3e-06
Identities = 19/35 (54%), Positives = 26/35 (74%)
Query: 18 FQPFFGYVDMRALLENFCVYHVNAPGQEEGAPSLP 52
F FF + DM+ + ++F V HV+APGQ+EGAPS P
Sbjct: 59 FNAFFNFEDMQEITQHFAVCHVDAPGQQEGAPSFP 93
>AF159092-1|AAD43131.2| 357|Homo sapiens syld709613 protein
protein.
Length = 357
Score = 48.8 bits (111), Expect = 3e-06
Identities = 22/42 (52%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Query: 11 LIYKDASFQPFFGYVDMRALLENFCVYHVNAPGQEEGAPSLP 52
L YK FQP F + DM+ +++NF HV+APG EEGAP P
Sbjct: 59 LNYKSC-FQPLFQFEDMQEIIQNFVRVHVDAPGMEEGAPVFP 99
>AF087872-1|AAM10500.1| 356|Homo sapiens cytoplasmic protein Ndr1
protein.
Length = 356
Score = 48.8 bits (111), Expect = 3e-06
Identities = 22/42 (52%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Query: 11 LIYKDASFQPFFGYVDMRALLENFCVYHVNAPGQEEGAPSLP 52
L YK FQP F + DM+ +++NF HV+APG EEGAP P
Sbjct: 58 LNYKSC-FQPLFQFEDMQEIIQNFVRVHVDAPGMEEGAPVFP 98
>AB044943-1|BAB20067.1| 375|Homo sapiens NDRG3 protein.
Length = 375
Score = 48.8 bits (111), Expect = 3e-06
Identities = 19/35 (54%), Positives = 26/35 (74%)
Query: 18 FQPFFGYVDMRALLENFCVYHVNAPGQEEGAPSLP 52
F FF + DM+ + ++F V HV+APGQ+EGAPS P
Sbjct: 71 FNAFFNFEDMQEITQHFAVCHVDAPGQQEGAPSFP 105
>AB033074-1|BAA86562.1| 368|Homo sapiens KIAA1248 protein protein.
Length = 368
Score = 48.8 bits (111), Expect = 3e-06
Identities = 22/42 (52%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Query: 11 LIYKDASFQPFFGYVDMRALLENFCVYHVNAPGQEEGAPSLP 52
L YK FQP F + DM+ +++NF HV+APG EEGAP P
Sbjct: 70 LNYKSC-FQPLFQFEDMQEIIQNFVRVHVDAPGMEEGAPVFP 110
>AK027665-1|BAB55277.1| 363|Homo sapiens protein ( Homo sapiens
cDNA FLJ14759 fis, clone NT2RP3003290, moderately
similar to Mus musculus mRNA for Ndr1 related protein
Ndr3. ).
Length = 363
Score = 46.8 bits (106), Expect = 1e-05
Identities = 18/32 (56%), Positives = 25/32 (78%)
Query: 21 FFGYVDMRALLENFCVYHVNAPGQEEGAPSLP 52
FF + DM+ + ++F V HV+APGQ+EGAPS P
Sbjct: 62 FFNFEDMQEITQHFAVCHVDAPGQQEGAPSFP 93
>X92845-1|CAA63430.1| 394|Homo sapiens Drg1 protein.
Length = 394
Score = 45.6 bits (103), Expect = 3e-05
Identities = 17/35 (48%), Positives = 25/35 (71%)
Query: 18 FQPFFGYVDMRALLENFCVYHVNAPGQEEGAPSLP 52
+ P F Y DM+ + ++F V HV+APGQ++GA S P
Sbjct: 73 YNPLFNYEDMQEITQHFAVCHVDAPGQQDGAASFP 107
>D87953-1|BAA13505.1| 394|Homo sapiens RTP protein.
Length = 394
Score = 45.6 bits (103), Expect = 3e-05
Identities = 17/35 (48%), Positives = 25/35 (71%)
Query: 18 FQPFFGYVDMRALLENFCVYHVNAPGQEEGAPSLP 52
+ P F Y DM+ + ++F V HV+APGQ++GA S P
Sbjct: 73 YNPLFNYEDMQEITQHFAVCHVDAPGQQDGAASFP 107
>CR456842-1|CAG33123.1| 394|Homo sapiens NDRG1 protein.
Length = 394
Score = 45.6 bits (103), Expect = 3e-05
Identities = 17/35 (48%), Positives = 25/35 (71%)
Query: 18 FQPFFGYVDMRALLENFCVYHVNAPGQEEGAPSLP 52
+ P F Y DM+ + ++F V HV+APGQ++GA S P
Sbjct: 73 YNPLFNYEDMQEITQHFAVCHVDAPGQQDGAASFP 107
>BC003175-1|AAH03175.1| 394|Homo sapiens N-myc downstream regulated
gene 1 protein.
Length = 394
Score = 45.6 bits (103), Expect = 3e-05
Identities = 17/35 (48%), Positives = 25/35 (71%)
Query: 18 FQPFFGYVDMRALLENFCVYHVNAPGQEEGAPSLP 52
+ P F Y DM+ + ++F V HV+APGQ++GA S P
Sbjct: 73 YNPLFNYEDMQEITQHFAVCHVDAPGQQDGAASFP 107
>AK223542-1|BAD97262.1| 394|Homo sapiens N-myc downstream regulated
gene 1 variant protein.
Length = 394
Score = 45.6 bits (103), Expect = 3e-05
Identities = 17/35 (48%), Positives = 25/35 (71%)
Query: 18 FQPFFGYVDMRALLENFCVYHVNAPGQEEGAPSLP 52
+ P F Y DM+ + ++F V HV+APGQ++GA S P
Sbjct: 73 YNPLFNYEDMQEITQHFAVCHVDAPGQQDGAASFP 107
>AF004162-1|AAC13419.1| 394|Homo sapiens nickel-specific induction
protein protein.
Length = 394
Score = 45.6 bits (103), Expect = 3e-05
Identities = 17/35 (48%), Positives = 25/35 (71%)
Query: 18 FQPFFGYVDMRALLENFCVYHVNAPGQEEGAPSLP 52
+ P F Y DM+ + ++F V HV+APGQ++GA S P
Sbjct: 73 YNPLFNYEDMQEITQHFAVCHVDAPGQQDGAASFP 107
>AY277597-1|AAQ18036.1| 394|Homo sapiens transformation-related
protein 14 protein.
Length = 394
Score = 44.0 bits (99), Expect = 8e-05
Identities = 17/35 (48%), Positives = 25/35 (71%)
Query: 18 FQPFFGYVDMRALLENFCVYHVNAPGQEEGAPSLP 52
+ P F Y DM+ + ++F V HV+APGQ++GA S P
Sbjct: 73 YNPPFNYEDMQEITQHFAVCHVDAPGQQDGAASFP 107
>BC011795-1|AAH11795.1| 339|Homo sapiens NDRG4 protein protein.
Length = 339
Score = 41.1 bits (92), Expect = 5e-04
Identities = 16/36 (44%), Positives = 24/36 (66%)
Query: 18 FQPFFGYVDMRALLENFCVYHVNAPGQEEGAPSLPE 53
F FF + DM+ + ++F V HV+APGQ+ GA P+
Sbjct: 47 FNTFFNFEDMQEITKHFVVCHVDAPGQQVGASQFPQ 82
>AK131248-1|BAD18428.1| 357|Homo sapiens protein ( Homo sapiens
cDNA FLJ16174 fis, clone BRHIP2005724, highly similar
to Homo sapiens mRNA for NDRG4-B. ).
Length = 357
Score = 41.1 bits (92), Expect = 5e-04
Identities = 16/36 (44%), Positives = 24/36 (66%)
Query: 18 FQPFFGYVDMRALLENFCVYHVNAPGQEEGAPSLPE 53
F FF + DM+ + ++F V HV+APGQ+ GA P+
Sbjct: 65 FNTFFNFEDMQEITKHFVVCHVDAPGQQVGASQFPQ 100
>AK126574-1|BAC86600.1| 391|Homo sapiens . protein.
Length = 391
Score = 41.1 bits (92), Expect = 5e-04
Identities = 16/36 (44%), Positives = 24/36 (66%)
Query: 18 FQPFFGYVDMRALLENFCVYHVNAPGQEEGAPSLPE 53
F FF + DM+ + ++F V HV+APGQ+ GA P+
Sbjct: 99 FNTFFNFEDMQEITKHFVVCHVDAPGQQVGASQFPQ 134
>AF308608-1|AAL08806.1| 339|Homo sapiens development-related
protein NDR4 protein.
Length = 339
Score = 41.1 bits (92), Expect = 5e-04
Identities = 16/36 (44%), Positives = 24/36 (66%)
Query: 18 FQPFFGYVDMRALLENFCVYHVNAPGQEEGAPSLPE 53
F FF + DM+ + ++F V HV+APGQ+ GA P+
Sbjct: 47 FNTFFNFEDMQEITKHFVVCHVDAPGQQVGASQFPQ 82
>AB044947-3|BAB20073.1| 352|Homo sapiens NDRG4-H protein.
Length = 352
Score = 41.1 bits (92), Expect = 5e-04
Identities = 16/36 (44%), Positives = 24/36 (66%)
Query: 18 FQPFFGYVDMRALLENFCVYHVNAPGQEEGAPSLPE 53
F FF + DM+ + ++F V HV+APGQ+ GA P+
Sbjct: 47 FNTFFNFEDMQEITKHFVVCHVDAPGQQVGASQFPQ 82
>AB044947-2|BAB20072.1| 339|Homo sapiens NDRG4-Bvar protein.
Length = 339
Score = 41.1 bits (92), Expect = 5e-04
Identities = 16/36 (44%), Positives = 24/36 (66%)
Query: 18 FQPFFGYVDMRALLENFCVYHVNAPGQEEGAPSLPE 53
F FF + DM+ + ++F V HV+APGQ+ GA P+
Sbjct: 47 FNTFFNFEDMQEITKHFVVCHVDAPGQQVGASQFPQ 82
>AB044947-1|BAB20071.1| 371|Homo sapiens NDRG4-B protein.
Length = 371
Score = 41.1 bits (92), Expect = 5e-04
Identities = 16/36 (44%), Positives = 24/36 (66%)
Query: 18 FQPFFGYVDMRALLENFCVYHVNAPGQEEGAPSLPE 53
F FF + DM+ + ++F V HV+APGQ+ GA P+
Sbjct: 79 FNTFFNFEDMQEITKHFVVCHVDAPGQQVGASQFPQ 114
>AB044946-1|BAB20070.1| 371|Homo sapiens NDRG4-H protein.
Length = 371
Score = 41.1 bits (92), Expect = 5e-04
Identities = 16/36 (44%), Positives = 24/36 (66%)
Query: 18 FQPFFGYVDMRALLENFCVYHVNAPGQEEGAPSLPE 53
F FF + DM+ + ++F V HV+APGQ+ GA P+
Sbjct: 79 FNTFFNFEDMQEITKHFVVCHVDAPGQQVGASQFPQ 114
>AB044945-1|BAB20069.1| 352|Homo sapiens NDRG4-Bvar protein.
Length = 352
Score = 41.1 bits (92), Expect = 5e-04
Identities = 16/36 (44%), Positives = 24/36 (66%)
Query: 18 FQPFFGYVDMRALLENFCVYHVNAPGQEEGAPSLPE 53
F FF + DM+ + ++F V HV+APGQ+ GA P+
Sbjct: 47 FNTFFNFEDMQEITKHFVVCHVDAPGQQVGASQFPQ 82
>AB044944-1|BAB20068.1| 339|Homo sapiens NDRG4-B protein.
Length = 339
Score = 41.1 bits (92), Expect = 5e-04
Identities = 16/36 (44%), Positives = 24/36 (66%)
Query: 18 FQPFFGYVDMRALLENFCVYHVNAPGQEEGAPSLPE 53
F FF + DM+ + ++F V HV+APGQ+ GA P+
Sbjct: 47 FNTFFNFEDMQEITKHFVVCHVDAPGQQVGASQFPQ 82
>AB033006-1|BAA86494.2| 360|Homo sapiens KIAA1180 protein
protein.
Length = 360
Score = 41.1 bits (92), Expect = 5e-04
Identities = 16/36 (44%), Positives = 24/36 (66%)
Query: 18 FQPFFGYVDMRALLENFCVYHVNAPGQEEGAPSLPE 53
F FF + DM+ + ++F V HV+APGQ+ GA P+
Sbjct: 55 FNTFFNFEDMQEITKHFVVCHVDAPGQQVGASQFPQ 90
>AB021172-1|BAB20288.1| 371|Homo sapiens SMAP-8 protein.
Length = 371
Score = 41.1 bits (92), Expect = 5e-04
Identities = 16/36 (44%), Positives = 24/36 (66%)
Query: 18 FQPFFGYVDMRALLENFCVYHVNAPGQEEGAPSLPE 53
F FF + DM+ + ++F V HV+APGQ+ GA P+
Sbjct: 79 FNTFFNFEDMQEITKHFVVCHVDAPGQQVGASQFPQ 114
>BC032376-1|AAH32376.1| 509|Homo sapiens PHF17 protein protein.
Length = 509
Score = 29.9 bits (64), Expect = 1.3
Identities = 13/31 (41%), Positives = 17/31 (54%)
Query: 10 KLIYKDASFQPFFGYVDMRALLENFCVYHVN 40
K I S P GYVD+R L ++ C Y +N
Sbjct: 114 KYIVSSGSEPPELGYVDIRTLADSVCRYDLN 144
>AK127326-1|BAC86931.1| 830|Homo sapiens protein ( Homo sapiens
cDNA FLJ45397 fis, clone BRHIP3027651, weakly similar
to Bromodomain-containing protein 1. ).
Length = 830
Score = 29.9 bits (64), Expect = 1.3
Identities = 13/31 (41%), Positives = 17/31 (54%)
Query: 10 KLIYKDASFQPFFGYVDMRALLENFCVYHVN 40
K I S P GYVD+R L ++ C Y +N
Sbjct: 102 KYIVSSGSEPPELGYVDIRTLADSVCRYDLN 132
>AK027620-1|BAB55239.1| 509|Homo sapiens protein ( Homo sapiens
cDNA FLJ14714 fis, clone NT2RP3001107, weakly similar to
PEREGRIN. ).
Length = 509
Score = 29.9 bits (64), Expect = 1.3
Identities = 13/31 (41%), Positives = 17/31 (54%)
Query: 10 KLIYKDASFQPFFGYVDMRALLENFCVYHVN 40
K I S P GYVD+R L ++ C Y +N
Sbjct: 114 KYIVSSGSEPPELGYVDIRTLADSVCRYDLN 144
>AF520952-1|AAM95612.1| 509|Homo sapiens PHD protein Jade-1
protein.
Length = 509
Score = 29.9 bits (64), Expect = 1.3
Identities = 13/31 (41%), Positives = 17/31 (54%)
Query: 10 KLIYKDASFQPFFGYVDMRALLENFCVYHVN 40
K I S P GYVD+R L ++ C Y +N
Sbjct: 114 KYIVSSGSEPPELGYVDIRTLADSVCRYDLN 144
>AC108024-1|AAY40997.1| 327|Homo sapiens unknown protein.
Length = 327
Score = 29.9 bits (64), Expect = 1.3
Identities = 13/31 (41%), Positives = 17/31 (54%)
Query: 10 KLIYKDASFQPFFGYVDMRALLENFCVYHVN 40
K I S P GYVD+R L ++ C Y +N
Sbjct: 114 KYIVSSGSEPPELGYVDIRTLADSVCRYDLN 144
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.320 0.137 0.417
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,877,702
Number of Sequences: 224733
Number of extensions: 246924
Number of successful extensions: 411
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 368
Number of HSP's gapped (non-prelim): 43
length of query: 54
length of database: 73,234,838
effective HSP length: 34
effective length of query: 20
effective length of database: 65,593,916
effective search space: 1311878320
effective search space used: 1311878320
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 57 (27.1 bits)
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