Silkworm BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000594-TA|BGIBMGA000594-PA|IPR004142|Ndr
         (62 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ130949-1|CAA10258.1|  401|Anopheles gambiae SG1 protein protein.     23   1.4  
U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette...    21   3.2  
U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette...    21   3.2  
U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette...    21   3.2  
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    21   5.6  
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    21   5.6  

>AJ130949-1|CAA10258.1|  401|Anopheles gambiae SG1 protein protein.
          Length = 401

 Score = 22.6 bits (46), Expect = 1.4
 Identities = 10/23 (43%), Positives = 15/23 (65%)

Query: 32  TDRGDILVAVQGDRNKPAIITYH 54
           T R  +L++VQG  +K A+  YH
Sbjct: 138 TYRSLVLMSVQGGASKQALKYYH 160


>U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 21.4 bits (43), Expect = 3.2
 Identities = 8/19 (42%), Positives = 11/19 (57%)

Query: 21  GEAACTEVRVRTDRGDILV 39
           GE ACT   V   R +I++
Sbjct: 637 GEIACTRANVTCPRSEIIL 655


>U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 21.4 bits (43), Expect = 3.2
 Identities = 8/19 (42%), Positives = 11/19 (57%)

Query: 21  GEAACTEVRVRTDRGDILV 39
           GE ACT   V   R +I++
Sbjct: 637 GEIACTRANVTCPRSEIIL 655


>U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 673

 Score = 21.4 bits (43), Expect = 3.2
 Identities = 8/19 (42%), Positives = 11/19 (57%)

Query: 21  GEAACTEVRVRTDRGDILV 39
           GE ACT   V   R +I++
Sbjct: 615 GEIACTRANVTCPRSEIIL 633


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 8/20 (40%), Positives = 11/20 (55%)

Query: 12  QFPSARRFSGEAACTEVRVR 31
           Q PS  +  G+   TE R+R
Sbjct: 905 QIPSVEQLKGKIHTTEKRIR 924


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
           FGF-signaling promoter protein.
          Length = 1197

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 9/25 (36%), Positives = 14/25 (56%)

Query: 4   IELRNIQLQFPSARRFSGEAACTEV 28
           IE+ NI+ + P   +FS    C E+
Sbjct: 432 IEITNIKRRNPYTIQFSVPEVCMEI 456


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.324    0.140    0.416 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,166
Number of Sequences: 2123
Number of extensions: 1610
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of query: 62
length of database: 516,269
effective HSP length: 41
effective length of query: 21
effective length of database: 429,226
effective search space:  9013746
effective search space used:  9013746
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (21.1 bits)
S2: 39 (19.8 bits)