Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000594-TA|BGIBMGA000594-PA|IPR004142|Ndr
(62 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g56750.1 68418.m07083 Ndr family protein similar to SP|O23969... 42 5e-05
At2g19620.1 68415.m02292 Ndr family protein similar to SP|O23969... 39 5e-04
At5g11790.1 68418.m01376 Ndr family protein similar to SP|O23969... 38 0.001
At4g13240.1 68417.m02059 hypothetical protein contains Pfam prof... 31 0.073
At3g24620.1 68416.m03092 expressed protein contains Pfam profile... 29 0.29
At1g04920.1 68414.m00489 sucrose-phosphate synthase, putative si... 26 2.7
At4g10120.1 68417.m01655 sucrose-phosphate synthase, putative si... 26 3.6
At5g48460.1 68418.m05992 fimbrin-like protein, putative strong s... 25 8.3
At5g20280.1 68418.m02414 sucrose-phosphate synthase, putative si... 25 8.3
At2g38490.1 68415.m04728 CBL-interacting protein kinase 22, puta... 25 8.3
>At5g56750.1 68418.m07083 Ndr family protein similar to SP|O23969
Pollen specific protein SF21 {Helianthus annuus};
contains Pfam profile PF03096: Ndr family
Length = 346
Score = 41.9 bits (94), Expect = 5e-05
Identities = 20/33 (60%), Positives = 23/33 (69%)
Query: 27 EVRVRTDRGDILVAVQGDRNKPAIITYHDLGLN 59
E RV+T G + V V GDR KPA+ITY DL LN
Sbjct: 21 EHRVKTASGVVSVIVYGDREKPALITYPDLALN 53
>At2g19620.1 68415.m02292 Ndr family protein similar to SP|O23969
Pollen specific protein SF21 {Helianthus annuus};
contains Pfam profile PF03096: Ndr family
Length = 347
Score = 38.7 bits (86), Expect = 5e-04
Identities = 17/33 (51%), Positives = 22/33 (66%)
Query: 27 EVRVRTDRGDILVAVQGDRNKPAIITYHDLGLN 59
E V+T G + V V GD+ KPA+ITY D+ LN
Sbjct: 21 EHHVKTCHGSVSVVVYGDQEKPALITYPDVALN 53
>At5g11790.1 68418.m01376 Ndr family protein similar to SP|O23969
Pollen specific protein SF21 {Helianthus annuus};
contains Pfam profile PF03096: Ndr family
Length = 344
Score = 37.5 bits (83), Expect = 0.001
Identities = 17/30 (56%), Positives = 21/30 (70%)
Query: 30 VRTDRGDILVAVQGDRNKPAIITYHDLGLN 59
V T G + VAV GD +KPA+ITY D+ LN
Sbjct: 24 VETTYGPVCVAVCGDPDKPALITYPDIALN 53
>At4g13240.1 68417.m02059 hypothetical protein contains Pfam profile
PF03759: Domain of unknown function (DUF315)
Length = 517
Score = 31.5 bits (68), Expect = 0.073
Identities = 13/41 (31%), Positives = 24/41 (58%)
Query: 11 LQFPSARRFSGEAACTEVRVRTDRGDILVAVQGDRNKPAII 51
++F +++ S E CTE+ V RGD+L+ + R A++
Sbjct: 148 VEFVPSQQISKEGVCTEIMVTRQRGDLLMNIPALRKLDAML 188
>At3g24620.1 68416.m03092 expressed protein contains Pfam profile
PF03759: Domain of unknown function (DUF315); expression
supported by MPSS
Length = 523
Score = 29.5 bits (63), Expect = 0.29
Identities = 12/41 (29%), Positives = 24/41 (58%)
Query: 11 LQFPSARRFSGEAACTEVRVRTDRGDILVAVQGDRNKPAII 51
++F +++ S + CTE+ V RGD+L+ + R A++
Sbjct: 159 VEFVPSQQTSKDGVCTEIMVTRQRGDLLMNIPALRKLDAML 199
>At1g04920.1 68414.m00489 sucrose-phosphate synthase, putative
similar to GB:Y11795 from [Craterostigma plantagineum]
Length = 1062
Score = 26.2 bits (55), Expect = 2.7
Identities = 11/27 (40%), Positives = 14/27 (51%)
Query: 33 DRGDILVAVQGDRNKPAIITYHDLGLN 59
D GD + G N P ++T H LG N
Sbjct: 319 DAGDSAALLSGALNVPMVLTGHSLGRN 345
>At4g10120.1 68417.m01655 sucrose-phosphate synthase, putative
similar to sucrose-phosphate synthase, Zea mays,
PIR2:JQ1329; contains non-consensus (GC) donor splice
site at intron 4
Length = 1050
Score = 25.8 bits (54), Expect = 3.6
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 33 DRGDILVAVQGDRNKPAIITYHDLGLN 59
D G++ + G N P ++T H LG N
Sbjct: 339 DAGEVAAHLAGALNVPMVLTGHSLGRN 365
>At5g48460.1 68418.m05992 fimbrin-like protein, putative strong
similarity to fimbrin-like protein AtFim2 [Arabidopsis
thaliana] GI:2737926; contains Pfam profile PF00307:
Calponin homology (CH) domain
Length = 654
Score = 24.6 bits (51), Expect = 8.3
Identities = 12/43 (27%), Positives = 25/43 (58%), Gaps = 4/43 (9%)
Query: 4 IELRNIQLQFPSARRFSGEAACTEVRVRTDRGDILVAVQGDRN 46
+ELR+++ F S +R SG+ +++ R + ++ GD+N
Sbjct: 21 VELRSLKSHFTSMKRESGKLTVSDLASRMGKSKVV----GDQN 59
>At5g20280.1 68418.m02414 sucrose-phosphate synthase, putative
similar to sucrose-phosphate synthase (EC 2.4.1.14)
isoform 1 - Citrus unshiu, EMBL:AB005023
Length = 1043
Score = 24.6 bits (51), Expect = 8.3
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 33 DRGDILVAVQGDRNKPAIITYHDLG 57
D GD + G N P ++T H LG
Sbjct: 318 DAGDATALLSGALNVPMLLTGHSLG 342
>At2g38490.1 68415.m04728 CBL-interacting protein kinase 22,
putative (CIPK22) identical to CBL-interacting protein
kinase 22 [Arabidopsis thaliana]
gi|17902248|gb|AAL47845
Length = 455
Score = 24.6 bits (51), Expect = 8.3
Identities = 11/21 (52%), Positives = 14/21 (66%)
Query: 37 ILVAVQGDRNKPAIITYHDLG 57
I+V V GD NK A+ +DLG
Sbjct: 35 IIVNVTGDDNKSALFGKYDLG 55
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.324 0.140 0.416
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,367,064
Number of Sequences: 28952
Number of extensions: 38079
Number of successful extensions: 77
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 68
Number of HSP's gapped (non-prelim): 10
length of query: 62
length of database: 12,070,560
effective HSP length: 42
effective length of query: 20
effective length of database: 10,854,576
effective search space: 217091520
effective search space used: 217091520
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 51 (24.6 bits)
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