Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000592-TA|BGIBMGA000592-PA|IPR008283|Peptidase M17,
leucyl aminopeptidase, N-terminal, IPR000819|Peptidase M17, leucyl
aminopeptidase, C-terminal, IPR011356|Peptidase M17, leucyl
aminopeptidase
         (452 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    24   2.5  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    23   4.4  

>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 23.8 bits (49), Expect = 2.5
 Identities = 10/26 (38%), Positives = 17/26 (65%)

Query: 306 LVYARNYWPKLIIDIGTMSKELIYTL 331
           L++  N++P+LII I   +  LI+ L
Sbjct: 86  LIFLVNWYPRLIIGIMNSTLNLIFLL 111


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory
          receptor candidate 50 protein.
          Length = 350

 Score = 23.0 bits (47), Expect = 4.4
 Identities = 10/33 (30%), Positives = 21/33 (63%)

Query: 24 AFVAVSGLGSECLTYNVSEQLDENKEAIRIAAG 56
          +F  V  LGS  ++  ++ ++D + E+I +A+G
Sbjct: 39 SFSVVLSLGSFIVSVYLTTKIDNDGESISLASG 71


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.321    0.138    0.424 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,075
Number of Sequences: 317
Number of extensions: 4327
Number of successful extensions: 5
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 3
Number of HSP's gapped (non-prelim): 2
length of query: 452
length of database: 114,650
effective HSP length: 59
effective length of query: 393
effective length of database: 95,947
effective search space: 37707171
effective search space used: 37707171
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 45 (22.2 bits)