BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA000591-TA|BGIBMGA000591-PA|IPR003961|Fibronectin, type III, IPR013098|Immunoglobulin I-set, IPR008957|Fibronectin, type III-like fold, IPR007110|Immunoglobulin-like, IPR003599|Immunoglobulin subtype, IPR003598|Immunoglobulin subtype 2 (1081 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 03_05_0276 + 22646416-22646760,22646858-22647090,22647184-226472... 33 0.94 01_06_1089 - 34451982-34452670,34452755-34452814,34453287-344533... 33 1.2 05_03_0040 - 7646525-7647775 32 2.2 05_03_0039 - 7621613-7622695 32 2.2 11_01_0477 - 3688357-3690042 32 2.9 04_03_0659 - 18453778-18453903,18453976-18454963,18455496-184562... 32 2.9 10_01_0298 - 3094197-3094307,3095093-3095253,3095462-3095666,309... 31 3.8 09_02_0625 + 11334418-11334499,11335067-11335164,11335758-113358... 31 3.8 06_03_1378 + 29705711-29706725,29707139-29707363,29707445-29707554 31 3.8 03_02_0804 + 11374219-11374221,11374326-11374473,11374556-113746... 31 3.8 02_01_0696 + 5208020-5208460 31 3.8 01_05_0598 + 23548081-23548186,23548277-23549508,23549621-235496... 31 5.0 07_03_1160 - 24430240-24431268 31 6.6 05_03_0487 + 14629678-14629789,14637563-14637687,14637898-146379... 30 8.7 04_04_1477 + 33873976-33874080,33874433-33874544,33874777-338748... 30 8.7 03_03_0246 + 15789635-15794227,15794314-15794555,15794630-157947... 30 8.7 02_05_0788 + 31758119-31758384,31758482-31758634,31759385-317595... 30 8.7 >03_05_0276 + 22646416-22646760,22646858-22647090,22647184-22647259, 22647383-22647459,22647559-22647592,22647699-22647848, 22647935-22648069,22648156-22648227 Length = 373 Score = 33.5 bits (73), Expect = 0.94 Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 1/62 (1%) Query: 70 HWKSAGRPAPPGKPQIIPILSDDEP-NAITLKWAPATHDGGAPLRGYQVECNRLGSTEWI 128 H +PAPP P ++ ++ DDE AP D + LR +V+ R + ++I Sbjct: 68 HAAEPKKPAPPPAPAVVVVVDDDEEGEGDPQLCAPYASDINSYLRSMEVQAKRRPAADYI 127 Query: 129 RT 130 T Sbjct: 128 ET 129 >01_06_1089 - 34451982-34452670,34452755-34452814,34453287-34453352, 34454055-34454253,34454470-34454719,34454830-34454898, 34455733-34455804,34456027-34456168,34456544-34457064, 34457166-34457739,34459164-34459269 Length = 915 Score = 33.1 bits (72), Expect = 1.2 Identities = 16/54 (29%), Positives = 26/54 (48%) Query: 816 LTLFKKITKMPVQKPFNFPKILSKNSMNKKQNTSEPEIEKIISTNEKNLDKIND 869 +T + +TK+P F P + + + N SE + I N KN+D IN+ Sbjct: 250 MTTNQDVTKLPGNDDFQVPMPILQKASTISSNFSEFNVSVIFPDNMKNIDNINN 303 >05_03_0040 - 7646525-7647775 Length = 416 Score = 32.3 bits (70), Expect = 2.2 Identities = 22/67 (32%), Positives = 25/67 (37%) Query: 769 KPLPDPNFVPKPILKRREIPEQSPAQNLMPPKSFVSAPKTEAKRQEKLTLFKKITKMPVQ 828 KP P P PKP K PE P P PK E K + + K P Sbjct: 269 KPEPKPEPKPKPEPKPHPKPEPKPEPKPEPKPEPKPEPKPEPKPEPEPKPEPKPEPKPEP 328 Query: 829 KPFNFPK 835 KP+ PK Sbjct: 329 KPYPEPK 335 Score = 31.9 bits (69), Expect = 2.9 Identities = 21/67 (31%), Positives = 25/67 (37%) Query: 769 KPLPDPNFVPKPILKRREIPEQSPAQNLMPPKSFVSAPKTEAKRQEKLTLFKKITKMPVQ 828 KP P+P PKP K P+ P P PK E K + K + P Sbjct: 105 KPYPEPKPEPKPEPKPEPEPKPEPKPEPKPEPKPYPEPKPEPKPEPKPEPKPEPKPKPEP 164 Query: 829 KPFNFPK 835 KP PK Sbjct: 165 KPHPEPK 171 Score = 30.3 bits (65), Expect = 8.7 Identities = 24/75 (32%), Positives = 30/75 (40%), Gaps = 6/75 (8%) Query: 767 TLKPLPDPNFVPKPILKRREIPEQSPAQNLMP---PKSFVS---APKTEAKRQEKLTLFK 820 T KP P P PKP+ + PE P P PK + PK E K + + Sbjct: 69 TPKPEPKPEPEPKPVPEPEPKPEPKPEPKPEPKPEPKPYPEPKPEPKPEPKPEPEPKPEP 128 Query: 821 KITKMPVQKPFNFPK 835 K P KP+ PK Sbjct: 129 KPEPKPEPKPYPEPK 143 >05_03_0039 - 7621613-7622695 Length = 360 Score = 32.3 bits (70), Expect = 2.2 Identities = 26/69 (37%), Positives = 28/69 (40%), Gaps = 4/69 (5%) Query: 768 LKPLPDPNFVPKPILKRREIPEQSPAQNLMP-PKSFVSAPKTEAKRQEKLTLFKKITKMP 826 LKP P PN PKP K PE P P PK PK E K + K + P Sbjct: 98 LKPEPKPNPEPKPEPKPEPKPEPKPYPEPKPKPK---PEPKPEPKPEHKPEPKPEPEPKP 154 Query: 827 VQKPFNFPK 835 KP PK Sbjct: 155 YPKPKPEPK 163 Score = 31.5 bits (68), Expect = 3.8 Identities = 17/48 (35%), Positives = 21/48 (43%) Query: 769 KPLPDPNFVPKPILKRREIPEQSPAQNLMPPKSFVSAPKTEAKRQEKL 816 KP P P+ PKP K + +P P P PK E K + KL Sbjct: 171 KPEPKPHPEPKPEPKPKPVPHPEPKPEPKPEPKPHPEPKPEPKPEPKL 218 Score = 31.5 bits (68), Expect = 3.8 Identities = 22/67 (32%), Positives = 26/67 (38%), Gaps = 2/67 (2%) Query: 769 KPLPDPNFVPKPILKRREIPEQSPAQNLMPPKSFVSAPKTEAKRQEKLTLFKKITKMPVQ 828 KP P+P PKP K PE P P PK E K + + K P Sbjct: 203 KPHPEPKPEPKPEPKLHPKPEPKPHPE--PEPKLKPEPKPEPKPEPEPKPEPKPEPKPEP 260 Query: 829 KPFNFPK 835 KP+ PK Sbjct: 261 KPYPKPK 267 Score = 31.5 bits (68), Expect = 3.8 Identities = 19/67 (28%), Positives = 24/67 (35%) Query: 769 KPLPDPNFVPKPILKRREIPEQSPAQNLMPPKSFVSAPKTEAKRQEKLTLFKKITKMPVQ 828 KP P P PKP+ K + IP P P P E K K P Sbjct: 261 KPYPKPKPEPKPVPKPKPIPHPGPKPKPKPDPKLEPKPHPEPKPHPMPEPEPKPKPEPKP 320 Query: 829 KPFNFPK 835 +P +P+ Sbjct: 321 EPKPYPE 327 Score = 30.7 bits (66), Expect = 6.6 Identities = 22/67 (32%), Positives = 24/67 (35%) Query: 769 KPLPDPNFVPKPILKRREIPEQSPAQNLMPPKSFVSAPKTEAKRQEKLTLFKKITKMPVQ 828 KP P+P PKP K PE P P PK E K K + P Sbjct: 121 KPYPEPKPKPKPEPKPEPKPEHKPEPKPEPEPKPYPKPKPEPKPGPKPEPKPEPKPHPEP 180 Query: 829 KPFNFPK 835 KP PK Sbjct: 181 KPEPKPK 187 Score = 30.7 bits (66), Expect = 6.6 Identities = 22/67 (32%), Positives = 24/67 (35%) Query: 769 KPLPDPNFVPKPILKRREIPEQSPAQNLMPPKSFVSAPKTEAKRQEKLTLFKKITKMPVQ 828 KP P+P PKP K PE P P PK E K + K K P Sbjct: 129 KPKPEPKPEPKPEHKPEPKPEPEPKPYPKPKPEPKPGPKPEPKPEPKPHPEPKPEPKPKP 188 Query: 829 KPFNFPK 835 P PK Sbjct: 189 VPHPEPK 195 >11_01_0477 - 3688357-3690042 Length = 561 Score = 31.9 bits (69), Expect = 2.9 Identities = 28/93 (30%), Positives = 40/93 (43%), Gaps = 11/93 (11%) Query: 700 QISFDEDYTASTVSTDGEYSDEGSFNGDIDRTQYLNEEETYNPRGKVAHPVSTKDTIVEK 759 Q+S+ Y STVS SD+G FN D+ + + ++ V+TK+ I+ Sbjct: 421 QLSYGYAYFVSTVSHCFNSSDDGGFNNDVTKPALMIIDD----------KVATKNNIIAN 470 Query: 760 DEFSESQTLKPLPDPNFVPKPILK-RREIPEQS 791 D S PK IL +EIPE S Sbjct: 471 DSLQSSCESSAKNSKVNSPKEILALLQEIPELS 503 >04_03_0659 - 18453778-18453903,18453976-18454963,18455496-18456229, 18456292-18456360,18456528-18456605,18456703-18456789, 18456881-18456931,18457021-18457092,18457177-18457304, 18458194-18458275,18458705-18458754,18459043-18459096, 18459586-18459675,18459903-18459983,18460443-18460538, 18460960-18461022,18461313-18461402,18461630-18461698, 18462051-18462291 Length = 1082 Score = 31.9 bits (69), Expect = 2.9 Identities = 32/157 (20%), Positives = 65/157 (41%), Gaps = 6/157 (3%) Query: 807 KTEAKRQEKLTLFKKITKMPVQKPFNFPKILSKNSMNKKQNTSEPEIEKIISTNEKNLDK 866 K E+K ++ K K+P F K + + K+ T E++I T+ + Sbjct: 63 KEESKSRKSTKDKSKKNKVPANAE-EFHKKYTTKVIRKESRTDSSSTEQVIGTSSIQEME 121 Query: 867 INDEGR---TVIDYYGNIVKEYGT--HKKSTPIYLNTEDLKEVAEKQNIERTKTQNDGIT 921 N++ + T I KEY T +K + N++ +++ NIE + + I+ Sbjct: 122 TNEQVKSKDTSKAIAERIHKEYTTKVNKHESRTVSNSKSKEQLIRTSNIEEKQKRKQIIS 181 Query: 922 ETNTSSQSNMPKTIIQNKPQNRVDKNIKQRKQSSNNI 958 E N+ + + + + N ++R S++I Sbjct: 182 ENNSKDMTQVQANAEEFHKEYTTKVNRQERITDSSSI 218 >10_01_0298 - 3094197-3094307,3095093-3095253,3095462-3095666, 3096349-3096534,3096616-3096756,3096843-3096959, 3097046-3097456 Length = 443 Score = 31.5 bits (68), Expect = 3.8 Identities = 27/129 (20%), Positives = 55/129 (42%), Gaps = 10/129 (7%) Query: 832 NFPKILSKNSMNKKQNTSEPEIEKIISTNEKNLDKINDEGRTVIDYYGNIVKEYGTHKKS 891 N PK LS++ + P + I + + D + G ++YY + +Y K S Sbjct: 195 NVPKGLSEDELRNIIQGKGPGVVNIEMFKDLH-DPSRNRGFLFVEYYNHACADYAKQKLS 253 Query: 892 TPIYLNTEDLKEVAEKQNIERTKTQNDGITETNTSSQSNMPKTI-IQNKPQNRVDKNIKQ 950 P + + + + + G + +++SS + KTI ++N P+N + IK+ Sbjct: 254 APNF--------KVDGSQLTVSWAEPKGSSSSDSSSAAAQVKTIYVKNLPENASKEKIKE 305 Query: 951 RKQSSNNIT 959 + +T Sbjct: 306 IFEIHGEVT 314 >09_02_0625 + 11334418-11334499,11335067-11335164,11335758-11335831, 11335996-11336598,11336692-11337185,11338035-11338170, 11338417-11338488,11338581-11338652,11339078-11339226, 11340129-11340364,11340567-11340693,11341011-11341079, 11341172-11341361,11341465-11341857,11342084-11342195 Length = 968 Score = 31.5 bits (68), Expect = 3.8 Identities = 26/101 (25%), Positives = 47/101 (46%), Gaps = 3/101 (2%) Query: 644 NELTKNSCSRETTAKTVEKIKGPEILIESEFVDNNVYSNDTRQ-LSRESMASDGKWQQIS 702 N++T + T AK+ + L+ ++FV D R L ++ + S+G + IS Sbjct: 37 NQITIICPQKITGAKSCYDQYFGKFLVVTDFVTRKQIKVDQRNNLGKQRLFSNGTYFHIS 96 Query: 703 FDEDYTA--STVSTDGEYSDEGSFNGDIDRTQYLNEEETYN 741 DED+ + + + Y DE + I QY++ E +N Sbjct: 97 VDEDFISIDCGLPSGFSYVDEKTNITYISDDQYIDTGENHN 137 >06_03_1378 + 29705711-29706725,29707139-29707363,29707445-29707554 Length = 449 Score = 31.5 bits (68), Expect = 3.8 Identities = 30/97 (30%), Positives = 43/97 (44%), Gaps = 9/97 (9%) Query: 130 TAPPIVLRPELVLTGLEPPHKYQFRVAALNDVGHSNYSELSDVLTVSSDRASQEPPVFIK 189 ++PPI + P + ++PPH F A+ + + H + V T + + PP Sbjct: 12 SSPPIGIPPTSIAAPVDPPHPI-FGAASSSPIAHRSLLPTPSVATAVAVQVDPPPP--HS 68 Query: 190 RLEDVTALENDKVEFHVTF--SGIPSPTI--AWFKDD 222 E V AL +DK V F S IP PT AW D Sbjct: 69 ESELVQAL-SDKYRLPVRFLLSSIP-PTYLSAWELSD 103 >03_02_0804 + 11374219-11374221,11374326-11374473,11374556-11374629, 11374736-11375233,11375749-11376093,11376178-11376390, 11376669-11377457,11377686-11377769 Length = 717 Score = 31.5 bits (68), Expect = 3.8 Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 2/52 (3%) Query: 938 NKPQNRVDKNIKQRKQSSNN-ITVDRNKSKLEAPPFSDKHNQTQKKSIPQIQ 988 NKP N D N+ +R +SS + +TV + S + SD+ NQ+ K+ + IQ Sbjct: 209 NKPSNPPDANMSRRDKSSTSLVTVPVDASSTDKDGKSDEGNQS-KEHVQSIQ 259 >02_01_0696 + 5208020-5208460 Length = 146 Score = 31.5 bits (68), Expect = 3.8 Identities = 30/124 (24%), Positives = 53/124 (42%), Gaps = 12/124 (9%) Query: 759 KDEFSESQTLK------PLPDPNFVPKPILKRREIPEQSPAQNLMPPKSFVSAPKTEAKR 812 +DEF+ +T K PLP +P L RRE+P S P +F + P+ A + Sbjct: 9 RDEFATPKTHKRKVVSRPLPPSQIKAEPELLRREVPLTSGKTKKAPKITFKNEPRHSAPQ 68 Query: 813 QEKLTLFKKITKMPVQKPFNFPKILSKNSMNKKQNTSEPEIEKIISTNEKNLDKINDEGR 872 + + +P P + + L K + + E++K +S E+ + DE Sbjct: 69 SD----WGTPDSVPEFGPADEYRALRKKYLLLEDENG--ELDKQLSQAEEEASVLEDEKF 122 Query: 873 TVID 876 ++D Sbjct: 123 ALLD 126 >01_05_0598 + 23548081-23548186,23548277-23549508,23549621-23549652, 23549796-23550039 Length = 537 Score = 31.1 bits (67), Expect = 5.0 Identities = 17/72 (23%), Positives = 37/72 (51%), Gaps = 4/72 (5%) Query: 841 SMNKKQNTSEPEIEKIISTNEKNLDKINDEGRTVIDYYGNIVKEYGTHKKSTPIYLNTED 900 ++N + P++ +S LD++ + R ++++ GN+ K+ G K+ N E+ Sbjct: 406 ALNHRYGAKLPDLHTGLSQTTMALDRMKADVRDLVEWKGNVAKDLGELKEWRS---NVEE 462 Query: 901 LKEVAE-KQNIE 911 ++ + E QN E Sbjct: 463 MRSIQETMQNKE 474 >07_03_1160 - 24430240-24431268 Length = 342 Score = 30.7 bits (66), Expect = 6.6 Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 1/32 (3%) Query: 770 PLPDPNFVPKPILKRREIPEQSPAQNLMP-PK 800 PLP+PN PKP + IP P +++P PK Sbjct: 168 PLPNPNVPPKPDQPPQPIPNGPPKPDMLPMPK 199 >05_03_0487 + 14629678-14629789,14637563-14637687,14637898-14637987, 14638267-14638319,14638616-14638718,14639057-14639131, 14639479-14639583 Length = 220 Score = 30.3 bits (65), Expect = 8.7 Identities = 31/134 (23%), Positives = 58/134 (43%), Gaps = 7/134 (5%) Query: 781 ILKRREIPEQSPAQNL----MPPKSFVSAPKTEAKRQEKLTLFKKITKMPVQKPFNFPKI 836 +LKR +P+++ + +PP V P++ L I ++ ++ F FP Sbjct: 32 LLKRNLVPKKTTSMGFERWWLPPPPEVKKPRSLYNAASLAYLGDCIYELYARRHFFFPP- 90 Query: 837 LSKNSMNKK-QNTSEPEIEKIISTNEKNLDKINDEGRTVIDYYGNIV-KEYGTHKKSTPI 894 LS N NK+ + + E + ++ D + E R ++ + NIV + T K++ Sbjct: 91 LSINDYNKRVMDVVKCESQDLLLNKLLGEDFLTQEERDILRWGRNIVSSKTRTRKRAGIA 150 Query: 895 YLNTEDLKEVAEKQ 908 N E EK+ Sbjct: 151 VYNRASSLETLEKE 164 >04_04_1477 + 33873976-33874080,33874433-33874544,33874777-33874874, 33875548-33876261,33876348-33876518,33876955-33877011, 33877096-33878718 Length = 959 Score = 30.3 bits (65), Expect = 8.7 Identities = 31/156 (19%), Positives = 66/156 (42%), Gaps = 12/156 (7%) Query: 709 ASTVSTDGEYSDEGSFNGDIDRTQYLNEEETYNPRGKVAHPVSTKDTIVEKDEFSESQTL 768 AS E DE + + L ++E P K+ + I+++D+ E Sbjct: 160 ASEKPLQQEKPDEKILQQEKSDEKILQQDE---PAEKILQQEKPDEKILQQDKPDEGPLN 216 Query: 769 KPLPDPNFVPKPILKRREIPEQSPAQNLMPPKSFVSAPKTEAKRQEKLTLFKKITKMPVQ 828 + +PD + KPI + + + PA P + TE ++ +++T++P+Q Sbjct: 217 EEMPDEKLIEKPIDQPGDESIEKPADE---PIEKSADQITERSIEQPA---ERVTEVPIQ 270 Query: 829 KP---FNFPKILSKNSMNKKQNTSEPEIEKIISTNE 861 +P I+ N + +++T + + +S+ E Sbjct: 271 EPTERVTETPIVKPNDNDVEEHTDKTDESIFVSSTE 306 >03_03_0246 + 15789635-15794227,15794314-15794555,15794630-15794771, 15796089-15796272,15796349-15796696,15796753-15797450, 15798208-15798900 Length = 2299 Score = 30.3 bits (65), Expect = 8.7 Identities = 33/171 (19%), Positives = 65/171 (38%), Gaps = 12/171 (7%) Query: 841 SMNKKQNTSEPEIEKIISTNEKNLDKINDEGRTVIDYYGNIVKEYGTHKKSTPIYLNTED 900 S N + + E ++ +N D+IN+ +D + + TH + P+ L ++ Sbjct: 957 SENNENRQKQDEYDE--ESNSYQEDEINEGDDENLDLDDEFAEGHSTHIEMEPVILGFDE 1014 Query: 901 LKEVAEKQNIE----RTKTQNDGITETNTSSQSNMPKTIIQNKPQNRVDKNIKQRKQSSN 956 +V N E K + G+ E S S P ++ + + + Q ++ Sbjct: 1015 GVQVEIPPNPEVELVSMKNTHSGVMEQQVGSSSVCPSDLVTEAEKALRNLALDQINALTD 1074 Query: 957 NITVDRNKSKLEAPPFSDKHNQTQKKSI-PQIQTVLKKTERATIVIPINYQ 1006 + + S + + P S H I P V ++E +P+N Q Sbjct: 1075 ETNNEPSNSLVASAPGSKLHQAPSTDPIMPPASAVSGRSE-----VPVNLQ 1120 >02_05_0788 + 31758119-31758384,31758482-31758634,31759385-31759509, 31759650-31759678,31760943-31761008,31761059-31761125, 31761226-31761370,31761404-31761451,31762014-31762182, 31762645-31762779,31762858-31763064,31763608-31763735, 31763815-31763866,31764046-31764060,31764502-31764609 Length = 570 Score = 30.3 bits (65), Expect = 8.7 Identities = 33/159 (20%), Positives = 63/159 (39%), Gaps = 15/159 (9%) Query: 336 SVLKIHSAKRSDRGEYQIQAKNIIGEDTAAFLVTVTAPPDPPRNVSVTRQVDKSVTLDWE 395 +++ + +A+R R ++ ++ + D AF P P RQ+ +T Sbjct: 31 AIVFVEAARRRRRW---LRDRSEVPPDFGAFCYRFEIAPAPQPPPPAARQLLSGLTF--- 84 Query: 396 PPADDGGCKVGNYIVEYYRTGWNVWLKAITSRKTNVTLFDLIEGSEYKFRIKAESPYGMS 455 A ++ Y+ + W KA T VT+ G+ + E +G+S Sbjct: 85 --AASDNFEIEGYVAGFGNPDWKRTHKAATRTAVPVTMLQKQGGTYVGSTVMDELGFGVS 142 Query: 456 A-------PSSESSPVRIPGRAIDMDFLAVEARIINEAL 487 P + +SP PG + +AV A++++ AL Sbjct: 143 GGNLHNGTPINPASPSLFPGGSCSGSAVAVSAQLVDFAL 181 Database: rice Posted date: Oct 3, 2007 3:31 PM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.314 0.131 0.381 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 30,861,542 Number of Sequences: 37544 Number of extensions: 1332770 Number of successful extensions: 2868 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 4 Number of HSP's successfully gapped in prelim test: 13 Number of HSP's that attempted gapping in prelim test: 2671 Number of HSP's gapped (non-prelim): 183 length of query: 1081 length of database: 14,793,348 effective HSP length: 90 effective length of query: 991 effective length of database: 11,414,388 effective search space: 11311658508 effective search space used: 11311658508 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 42 (21.9 bits) S2: 65 (30.3 bits)
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