Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000591-TA|BGIBMGA000591-PA|IPR003961|Fibronectin, type
III, IPR013098|Immunoglobulin I-set, IPR008957|Fibronectin, type
III-like fold, IPR007110|Immunoglobulin-like, IPR003599|Immunoglobulin
subtype, IPR003598|Immunoglobulin subtype 2
(1081 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1952.03 |||cysteine protease, OTU family|Schizosaccharomyces... 38 0.008
SPAC26F1.09 |gyp51||GTPase activating protein Gyp51 |Schizosacch... 37 0.013
SPAC2F7.07c |||histone deacetylase complex subunit Rco1 |Schizos... 36 0.031
SPBC336.15 |pic1|SPBC685.01|INCENP-like|Schizosaccharomyces pomb... 31 1.1
SPBC36.09 |sap61||U2 snRNP-associated protein sap61|Schizosaccha... 31 1.1
SPBC9B6.11c |||CCR4/nocturin family endoribonuclease|Schizosacch... 31 1.1
SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 30 1.5
SPBC6B1.09c |nbs1||Mre11 complex subunit Nbs1|Schizosaccharomyce... 30 1.5
SPBC409.19c |||metaxin|Schizosaccharomyces pombe|chr 2|||Manual 30 1.5
SPCC4B3.15 |mid1|dmf1|medial ring protein Mid1|Schizosaccharomyc... 30 1.5
SPBC365.11 |||GRIP domain protein|Schizosaccharomyces pombe|chr ... 30 2.0
SPAC26A3.12c |dhp1||5'-3' exoribonuclease Dhp1 |Schizosaccharomy... 30 2.0
SPAP14E8.02 |||transcription factor |Schizosaccharomyces pombe|c... 30 2.0
SPAC1782.03 |||microfibrillar-associated protein family protein|... 29 3.5
SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1... 29 3.5
SPBC19C2.10 |||BAR adaptor protein|Schizosaccharomyces pombe|chr... 29 3.5
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 29 4.6
SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40 |Schi... 29 4.6
SPAC607.10 |spo3||sporulation protein Spo3|Schizosaccharomyces p... 29 4.6
SPBC9B6.10 |cdc37||Hsp90 co-chaperone Cdc37|Schizosaccharomyces ... 29 4.6
SPAPB17E12.13 |rpl1802|rpl18-2|60S ribosomal protein L18|Schizos... 29 4.6
SPBC1685.01 |pmp1||dual-specificity MAP kinase phosphatase Pmp1|... 29 4.6
SPCC1183.06 |ung1||uracil DNA N-glycosylase Ung1|Schizosaccharom... 29 4.6
SPAC1A6.01c ||SPAC23C4.20c|human thyroid receptor interacting pr... 28 6.1
SPAC19G12.02c |pms1||MutL family mismatch-repair protein Pms1|Sc... 28 6.1
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 28 6.1
SPBC1604.18c |||vacuolar sorting protein |Schizosaccharomyces po... 28 6.1
SPAC144.05 |||ATP-dependent DNA helicase|Schizosaccharomyces pom... 28 6.1
SPAC1142.01 ||SPAC17G6.18|DUF654 family protein|Schizosaccharomy... 28 6.1
SPBC1706.01 |tea4|wsh3|tip elongation aberrant protein Tea4|Schi... 28 6.1
SPAC16E8.11c |tfb1||transcription factor TFIIH complex subunit T... 28 6.1
SPAC15A10.13 |ppk3||serine/threonine protein kinase Ppk3|Schizos... 28 8.1
SPCC330.09 |||rRNA processing protein Enp2 |Schizosaccharomyces ... 28 8.1
SPAC13A11.01c |rga8|SPAC2F7.18c|GTPase activating protein Rga8 |... 28 8.1
SPAC1639.02c |trk2|SPAC1F5.12|potassium ion transporter Trk2|Sch... 28 8.1
>SPAC1952.03 |||cysteine protease, OTU family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 324
Score = 37.9 bits (84), Expect = 0.008
Identities = 36/164 (21%), Positives = 69/164 (42%), Gaps = 11/164 (6%)
Query: 861 EKNLDKINDEGRTVIDYYGNIVKEY--GTHKKSTPIYLNTEDLK-EVAEKQNIERTKTQN 917
E+ L K +E + + N+ K+ G K+ + ++ ++++K ER K
Sbjct: 26 EELLSKQREECKELQSKITNLRKQLKEGNKKQKRALQQKISQMEADLSQKHATERQKLDK 85
Query: 918 DGITETNTSSQSNMPKTIIQNKPQNRVDKNIKQRKQSSNNITVDRNKSKLEAPPFSDKHN 977
G ETN + Q ++ T++Q ++ K QSS N +K P K
Sbjct: 86 -GDEETNETQQEDLLNTLLQQMEDTKITTAEKSSVQSSLN-------TKENTPQQPKKSR 137
Query: 978 QTQKKSIPQIQTVLKKTERATIVIPINYQELETKAKKKVRSIID 1021
QK+ + + + +KK + +L+ + KKK I++
Sbjct: 138 NRQKERLERRKAEMKKMSEQAELESEKMADLKNEEKKKFSKILE 181
>SPAC26F1.09 |gyp51||GTPase activating protein Gyp51
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1031
Score = 37.1 bits (82), Expect = 0.013
Identities = 34/161 (21%), Positives = 72/161 (44%), Gaps = 15/161 (9%)
Query: 835 KILSKNSMNKKQNTSEPEIEKIISTNEKNLDKINDEGRTVIDYYGNIVKEYGTHK--KST 892
++ S + N+ + + E E ++ N+++ D ++ ++ E T + K
Sbjct: 200 EVKSVHEFNEPNDLRQQE-ESYSDDDDTNVNEFEDVNEIENEHQLSVADEDQTSRLVKGK 258
Query: 893 PIYLNTEDLKEVAEKQN---IERTKTQND---GITET----NTSSQSNMPKTIIQNKPQN 942
I++ ED E A+ N IE+ +D G ET N+SS + P + ++
Sbjct: 259 MIFVGKEDFGEEADISNSVFIEQNGPNSDTVSGFKETSSIVNSSSTTEKPGVALDSQNDT 318
Query: 943 RV--DKNIKQRKQSSNNITVDRNKSKLEAPPFSDKHNQTQK 981
+ ++ ++ N++T+D +E+ P + K N+T K
Sbjct: 319 SIFNEEQTNSLTETFNDLTLDHLPENVESEPVAGKENETAK 359
>SPAC2F7.07c |||histone deacetylase complex subunit Rco1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 607
Score = 35.9 bits (79), Expect = 0.031
Identities = 38/187 (20%), Positives = 76/187 (40%), Gaps = 13/187 (6%)
Query: 836 ILSKNSMNKKQNTSEPEIEKIISTNEKNLDKINDEGRTVIDYYGNIVKEY----GTHKKS 891
I S+++ K + + S ++D +D + +DY ++ +++ G K
Sbjct: 40 INSRSASPNKATSRRNRAQNGNSNGRASVDNSDDGSKDDLDYSPSVKRKHVNGEGAEKGD 99
Query: 892 TPIYLNTEDLKEVAEKQNIERTKTQNDGITETNTSSQSNMPKTIIQNKPQNRVDKNIKQR 951
N + ++ K + RT DG NT P I+ ++ ++R I +
Sbjct: 100 HDTSNNGPSITKLRRK--VRRTYDTKDGFVAWNTLDDDFRP--IVPDQERSR---KINPQ 152
Query: 952 KQSSNNITVDRNKSKLEAPPFSDKHNQTQKKSIPQIQTVL--KKTERATIVIPINYQELE 1009
K ++NN+ + K A SD + + KK+ + + K T +A I +P + E
Sbjct: 153 KGNNNNLLKENKSLKTTAKDLSDISSSSMKKANNSSKPLFSGKLTFKANIPVPTSEVVTE 212
Query: 1010 TKAKKKV 1016
+ V
Sbjct: 213 NNVTRNV 219
>SPBC336.15 |pic1|SPBC685.01|INCENP-like|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1018
Score = 30.7 bits (66), Expect = 1.1
Identities = 56/275 (20%), Positives = 111/275 (40%), Gaps = 28/275 (10%)
Query: 670 IESEFVDNNVYSNDTRQLSRESMASDGKWQQISFDEDYTASTVSTDGEY--SDEGSFN-G 726
+E+E + + SN+ R SD K Q+ F E +++ E S+E +
Sbjct: 374 VEAEALTAKLKSNEERLPVSSQPGSDAKSQEFDFFEAKIPDSIAKLNELTASNENHYELK 433
Query: 727 DIDRTQYLNE--EETYNPRGKVAHPVSTKDTIVEKDEFSESQTLKPLPDPNFVPKPILKR 784
DR + L + +E + + + TK I + +++ K L L +
Sbjct: 434 TYDRAERLRQKIQEVSSNKRLIPSTPPTKKPINAVLDAAKNSAAKDLH---------LAK 484
Query: 785 REIPEQSPAQNLMPPKSFVSAPKTEAKRQEKLTLFKKITKMPVQKPFNFPKI-----LSK 839
++ ++ +L P KS A T+A + ++ F +++ FN K
Sbjct: 485 MKLNNKNDESSLSPAKS--HAVITQAPKIPLISTFTRLSTRKSSNDFNSSNSRPSSNALK 542
Query: 840 NSMNKKQNTSEPEIEKIISTNEKNLDKINDEGRTVIDYYGNIVKEYGTHKKSTPIYLNTE 899
+ N+ ++S P +K EK+L K+++ D N + H + I + T
Sbjct: 543 SDANENTDSSLPPSKK--EFIEKSLHKLSEPLHD--DSRQNSDHNFAPHSRPIAIRVATA 598
Query: 900 DLKEVAEKQNIERTKTQNDGITETNTSSQSNMPKT 934
+E+ + E+ K +N +N S+S+ +T
Sbjct: 599 SQREL---EQTEKRKAKNGAANASNMESRSSENET 630
>SPBC36.09 |sap61||U2 snRNP-associated protein
sap61|Schizosaccharomyces pombe|chr 2|||Manual
Length = 492
Score = 30.7 bits (66), Expect = 1.1
Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 3/96 (3%)
Query: 650 SCSRETTAKTVEKIKGPEILIESEFVDNNVYS--NDTRQLSRESMASDGKWQQISFDEDY 707
S S TT+ T EK KGP+ + EF+ + S +D R+ +RE++ +
Sbjct: 276 SSSPSTTSNTNEKQKGPKAIARIEFLIKKLTSLLDDVRKDTRENVVRRQTLTAAERLAEV 335
Query: 708 TASTVSTDGEYSDEGSFNGDID-RTQYLNEEETYNP 742
A+ + + S G+ D + +EE+ YNP
Sbjct: 336 EAAEREAFEQSTPSVSVEGNQDEESDQDDEEKIYNP 371
>SPBC9B6.11c |||CCR4/nocturin family
endoribonuclease|Schizosaccharomyces pombe|chr
2|||Manual
Length = 502
Score = 30.7 bits (66), Expect = 1.1
Identities = 24/76 (31%), Positives = 31/76 (40%), Gaps = 2/76 (2%)
Query: 760 DEFSESQTLKPLPDPNFVPKPILKRREIPEQSPAQNLMPPKSFVSAPKTEAKRQEKL-TL 818
D F L L F K IP + PP SFV+ E +RQ+KL +
Sbjct: 17 DRFHTDYRLSKLAISFFDQKKNKMADSIPVKKKGSAKGPP-SFVTPEYIEKQRQKKLEKM 75
Query: 819 FKKITKMPVQKPFNFP 834
KK + P+ P N P
Sbjct: 76 AKKAARKPIAPPSNAP 91
>SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 395
Score = 30.3 bits (65), Expect = 1.5
Identities = 29/121 (23%), Positives = 53/121 (43%), Gaps = 7/121 (5%)
Query: 902 KEVAEKQNIERTKTQNDGITETNTSSQSN--MPKTIIQNKPQN-RVDKNIKQRKQSSNNI 958
++ A K + E K +T +TSSQ + K + N + DK IK+ K+ N++
Sbjct: 118 EDKAAKPDGEIKKNVETEVTSRSTSSQEKDELEKQVKTLHDLNEQKDKKIKELKERINDL 177
Query: 959 TVDRNKSKLEAPPFSDKHNQTQKKSIP----QIQTVLKKTERATIVIPINYQELETKAKK 1014
T D K A K K+ Q + ++++ E + +N +E + K ++
Sbjct: 178 TYDYETLKANADDSEGKQTLVSKREAALEEFQSKLLIRENEINKRELKMNGKEDDLKKRE 237
Query: 1015 K 1015
K
Sbjct: 238 K 238
>SPBC6B1.09c |nbs1||Mre11 complex subunit Nbs1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 30.3 bits (65), Expect = 1.5
Identities = 36/161 (22%), Positives = 73/161 (45%), Gaps = 8/161 (4%)
Query: 764 ESQTLKPLPDPNFVPKPILKRREIPEQSPAQNLMPPKS-FVSAPKTE-AKRQEKLTL--F 819
E + LK N P+ I++ + +++ +L K +PK++ K E L++ F
Sbjct: 313 EIERLKYATASNSTPQKIIQPQRHIQKNIVDDLFSVKKPLPCSPKSKRVKTLENLSIMDF 372
Query: 820 KKITKMPVQKPFNFPKILSKN--SMNKKQ-NTSEPEIEKIISTNEKNLDKINDEGRTVID 876
+ +M ++P + S N + NKK + SE + S+++K+ + + +G+T ++
Sbjct: 373 VQPKQMFGKEPEGYLSNQSNNGSAQNKKSGDNSEKTKNSLKSSSKKSANTGSGQGKTKVE 432
Query: 877 YYGNIVKEYGTHKKSTPIYLNTEDLKEV-AEKQNIERTKTQ 916
Y + G P+ LN K+ AE ++ Q
Sbjct: 433 YVSYNSVDKGNSSPFKPLELNVVGEKKANAEVDSLPSENVQ 473
>SPBC409.19c |||metaxin|Schizosaccharomyces pombe|chr 2|||Manual
Length = 450
Score = 30.3 bits (65), Expect = 1.5
Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 156 AALNDVGHSNYSELSDVLTVSSDRASQEPPVFIKRL--EDVTALENDKVEFHVTFSGIPS 213
A L + + +S+ S++L+ S + E + I RL +VTA ND + FS P
Sbjct: 256 AYLKSLRETWFSDDSNILSPLSIKVQPENLLTIARLAWNNVTAKANDTRKSITKFSVPPE 315
Query: 214 PTIAWFKDDYEIFSS 228
+ W ++ + IF+S
Sbjct: 316 RKLLWARNGFFIFAS 330
>SPCC4B3.15 |mid1|dmf1|medial ring protein Mid1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 920
Score = 30.3 bits (65), Expect = 1.5
Identities = 21/90 (23%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Query: 688 SRESMASDGKWQQISFDEDYTASTVS-TDGEYSDEGSFNGDIDRTQYLNEEETYNPRGKV 746
+R+ M+S +++I+ +E+ +++ + G + S + + + ET+NP +
Sbjct: 104 NRKRMSSTSVFKRINSEEEGRIPSLTYSAGTMNSTSSSTASLKGADIVADYETFNPDQNL 163
Query: 747 AH-----PVSTKDTIVEKDEFSESQTLKPL 771
A S++ VE EFS ++T+ PL
Sbjct: 164 AELSFDRSKSSRKRAVEVAEFSRAKTMSPL 193
>SPBC365.11 |||GRIP domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 266
Score = 29.9 bits (64), Expect = 2.0
Identities = 19/99 (19%), Positives = 50/99 (50%), Gaps = 11/99 (11%)
Query: 835 KILSKNSMNKKQNTSEPEIEKIISTNEKNLDKINDEGRTVIDYYGNIVKEYGTHKKSTPI 894
+I +++++N KQ +I+K + +++ + K+ +E + D N+ E +
Sbjct: 112 EIYNRDALNTKQE--HLDIKKRLEKSDETVCKLKEENENLQDMLRNVGNE---------L 160
Query: 895 YLNTEDLKEVAEKQNIERTKTQNDGITETNTSSQSNMPK 933
+ +++KE+ EKQ +++ ++ ++ S +PK
Sbjct: 161 VESRDEIKELIEKQKVQKESVKSHESELSSVMSSEILPK 199
>SPAC26A3.12c |dhp1||5'-3' exoribonuclease Dhp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 991
Score = 29.9 bits (64), Expect = 2.0
Identities = 19/83 (22%), Positives = 39/83 (46%), Gaps = 3/83 (3%)
Query: 901 LKEVAEKQNIERTKTQNDGITETNTSSQSNMPKTIIQNKPQNRVDKNIKQRKQSSNNITV 960
LK+ +++N + Q E+N S+S + +IQ + + + + K +S +
Sbjct: 398 LKQQEDRRNENYRRRQQ---RESNQESESYVDNVVIQRSVETQSTEVVTSSKSTSVDTKP 454
Query: 961 DRNKSKLEAPPFSDKHNQTQKKS 983
+ K++AP D N ++K S
Sbjct: 455 PKKTQKIDAPAPVDLVNLSEKTS 477
>SPAP14E8.02 |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 566
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/51 (25%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 718 YSDEGSFNGDIDRTQYLNEEETYNPRGKVAHPVST-KDTIVEKDEFSESQT 767
+ +E + D+D+ + ++E E Y P + P++ +D++++ DE S T
Sbjct: 306 FENEKIESDDLDKNEEISEGEEYTPIEESKEPITVRRDSVIQIDESSAGLT 356
>SPAC1782.03 |||microfibrillar-associated protein family
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 355
Score = 29.1 bits (62), Expect = 3.5
Identities = 34/146 (23%), Positives = 61/146 (41%), Gaps = 9/146 (6%)
Query: 887 THKKSTPIYLNTEDLKEVAEKQNIERTKT----QNDGITET--NTSSQSNMPKTIIQNKP 940
+H + I + + V EK+ I TKT QN +T N++S+ + +
Sbjct: 40 SHDQENSISSSRHVITPVFEKEGISETKTSSNFQNINPVQTIDNSASEYETDASSAEGGS 99
Query: 941 QNRVDKNIKQRKQSSNNITVDRNKSKLEAPPFSDKHNQTQKKSIPQIQTVLKKTERATIV 1000
+ + ++ S R ++ L P F+ K + + K+ + VLKK I+
Sbjct: 100 NSAASSSEEEDSSDSEYEMELRRRTLLLPPKFTSKVIKNRAKANEEDTEVLKKVTSQKIL 159
Query: 1001 IPINYQEL---ETKAKKKVRSIIDYT 1023
+EL ETK ++ + ID T
Sbjct: 160 EETIKRELLLKETKNNNELLNDIDDT 185
>SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1
complex subunit Tpr1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1039
Score = 29.1 bits (62), Expect = 3.5
Identities = 22/88 (25%), Positives = 41/88 (46%), Gaps = 5/88 (5%)
Query: 902 KEVAEKQNIERTKTQNDGITETNTS----SQSNMPKTIIQNKPQNRVDK-NIKQRKQSSN 956
K+ E+Q E + + + E S S+ +M + + K + K + K+RK S
Sbjct: 896 KQERERQLQEERQKMQEEVLEWRKSQQKASEDDMSLSDDEEKQSGKKKKKDRKKRKSKSK 955
Query: 957 NITVDRNKSKLEAPPFSDKHNQTQKKSI 984
+ D S+ + P SD N+T+K+ +
Sbjct: 956 QESSDSGVSEDDEIPLSDARNKTKKRRV 983
>SPBC19C2.10 |||BAR adaptor protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 501
Score = 29.1 bits (62), Expect = 3.5
Identities = 20/71 (28%), Positives = 30/71 (42%)
Query: 166 YSELSDVLTVSSDRASQEPPVFIKRLEDVTALENDKVEFHVTFSGIPSPTIAWFKDDYEI 225
YS S +SS + P I ++D ++ E+H + +PS D+ I
Sbjct: 243 YSARSIPSNISSTNVATTPSNTIFEMDDTLKADSSSNEYHSPTNTLPSYHTEADLDNSSI 302
Query: 226 FSSRRTAITTD 236
SS RT T D
Sbjct: 303 ASSNRTQHTED 313
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 28.7 bits (61), Expect = 4.6
Identities = 28/124 (22%), Positives = 51/124 (41%), Gaps = 7/124 (5%)
Query: 899 EDLKEVAEKQ----NIERTKTQNDGITETNTSSQSNMPKTI---IQNKPQNRVDKNIKQR 951
E+L++ A Q N E ++G ++ S+ PK + + N P ++ +I Q
Sbjct: 322 EELEQYANIQRNLANTESVNASDEGSDKSQKGIISDSPKLLSIPLNNVPSKSLNDDITQD 381
Query: 952 KQSSNNITVDRNKSKLEAPPFSDKHNQTQKKSIPQIQTVLKKTERATIVIPINYQELETK 1011
+ +S+N VD + + + NQ SI L+ T + P +K
Sbjct: 382 ELNSSNADVDEEVIETTSLEEKNVDNQEFVTSISNGNQTLEDTSHSPQTQPPFQPPYPSK 441
Query: 1012 AKKK 1015
A +K
Sbjct: 442 ADEK 445
>SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 451
Score = 28.7 bits (61), Expect = 4.6
Identities = 22/137 (16%), Positives = 58/137 (42%), Gaps = 2/137 (1%)
Query: 838 SKNSMNKKQNTSEPEIEKIISTNEKNLDKINDEGRTVIDYYGNIVKEYGTHKKSTPIYLN 897
S + ++S+ E E ++ + + + E + D + + ST +
Sbjct: 248 SSEDSDSSSSSSDSESESSSKDSDSSSNSSDSEDDSSSDSSDSESESSSEDSDSTSSSSD 307
Query: 898 TEDLKEVAEKQNIERTKTQNDGITETNTSSQSNMPKTIIQNKPQNRV-DKNIKQRKQSSN 956
++ + + T T + +++T+S S+ T ++++ +++ DK++K RK +
Sbjct: 308 SDSSSSSEDGNSNTDTTTSGEVSAQSSTNSTSSEESTSVKDEDSSKIHDKSLK-RKHEDD 366
Query: 957 NITVDRNKSKLEAPPFS 973
+ S+ PF+
Sbjct: 367 ESSTSTKSSRTTKTPFT 383
>SPAC607.10 |spo3||sporulation protein Spo3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1028
Score = 28.7 bits (61), Expect = 4.6
Identities = 17/77 (22%), Positives = 30/77 (38%)
Query: 895 YLNTEDLKEVAEKQNIERTKTQNDGITETNTSSQSNMPKTIIQNKPQNRVDKNIKQRKQS 954
YLN + + E + D + T +S PK +I +P N++ + R +
Sbjct: 554 YLNLRYTSFITPQLCFEFLDKEADSCRDRLTEVKSEPPKAVIYEEPLNKLSRFSSDRLFT 613
Query: 955 SNNITVDRNKSKLEAPP 971
S+ + L PP
Sbjct: 614 SHELVAIAELISLNEPP 630
>SPBC9B6.10 |cdc37||Hsp90 co-chaperone Cdc37|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 466
Score = 28.7 bits (61), Expect = 4.6
Identities = 35/174 (20%), Positives = 73/174 (41%), Gaps = 20/174 (11%)
Query: 854 EKIISTNEKNLDKINDEGRTVIDYYGNIVKEYGTHKKSTPIYLNTEDL----------KE 903
EK + ++K L ++ ++ + KEY T + + Y+ +EDL K+
Sbjct: 127 EKSMDDSDKCLRRLKSHKERLLKLLEDAQKEYDTLEAESKNYITSEDLHLGFDSTYVQKK 186
Query: 904 VAEKQNIERTKTQNDGITET--NTSSQSNMPKTIIQ----NKPQNRVDKNIKQRKQSSNN 957
EK +TK + + E+ N + ++ P Q N P+N V++N +
Sbjct: 187 EPEKPKKTKTKKETIQVIESLNNPTPPTDFPGAKEQASTGNAPKNPVNEN---ESEDEEG 243
Query: 958 ITVDRNKSKLEAPPFSDKHNQTQKKSIPQIQTVLKKTERATIVIPINYQELETK 1011
+++ + K F D ++ +++ + + + E I++ ELE K
Sbjct: 244 LSLSEDGKKFANIDFGD-YSSSEEFLKEHLNILADEEESDAILLEAFNAELEGK 296
>SPAPB17E12.13 |rpl1802|rpl18-2|60S ribosomal protein
L18|Schizosaccharomyces pombe|chr 1|||Manual
Length = 187
Score = 28.7 bits (61), Expect = 4.6
Identities = 14/39 (35%), Positives = 21/39 (53%)
Query: 524 DTSRHDLRPSQAPEQNGSNEFMLLLYPEVQKLAEKTDAR 562
D RH +R SQ + N ++ LL + LA +TD+R
Sbjct: 4 DIERHHVRKSQRSKPASENVYLKLLVKLYRFLARRTDSR 42
>SPBC1685.01 |pmp1||dual-specificity MAP kinase phosphatase
Pmp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 278
Score = 28.7 bits (61), Expect = 4.6
Identities = 17/59 (28%), Positives = 25/59 (42%)
Query: 750 VSTKDTIVEKDEFSESQTLKPLPDPNFVPKPILKRREIPEQSPAQNLMPPKSFVSAPKT 808
VS K+ + ++E S SQ P P P PK P + + PP ++ A T
Sbjct: 18 VSHKNMLENEEEASHSQLFTPCPVPPSFPKASKPNSNQPYPNGPVCIYPPNIYLYAKPT 76
>SPCC1183.06 |ung1||uracil DNA N-glycosylase
Ung1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 322
Score = 28.7 bits (61), Expect = 4.6
Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 4/76 (5%)
Query: 896 LNTEDLKEVAEKQNIERTKTQN---DGITETNTSSQSNMPKTIIQNKPQNRVDKNIKQRK 952
LNT D ++ + N K + D +TNTSS + ++ NK N V K + K
Sbjct: 4 LNTTDKRKADDTVNKLDGKLKQPRLDNFFKTNTSSPALKDTQVLDNKENNSVSK-FNKEK 62
Query: 953 QSSNNITVDRNKSKLE 968
+ N R +LE
Sbjct: 63 WAENLTPAQRKLLQLE 78
>SPAC1A6.01c ||SPAC23C4.20c|human thyroid receptor interacting
protein homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 455
Score = 28.3 bits (60), Expect = 6.1
Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 7/79 (8%)
Query: 911 ERTKTQNDGITETNTSSQSNMPKTIIQNKPQNRVDKNIKQRKQSSNNITVDRNKSKLEAP 970
++ T N+ I + NT++ S+ P I N Q D+ + + +S RNKS+
Sbjct: 77 KKNVTPNNNIRQKNTATSSH-PSFYIANNKQKGYDEEMYKVNPAS------RNKSQSNNI 129
Query: 971 PFSDKHNQTQKKSIPQIQT 989
+K ++T K P + T
Sbjct: 130 SSHEKSSKTTKNVSPGVMT 148
>SPAC19G12.02c |pms1||MutL family mismatch-repair protein
Pms1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 794
Score = 28.3 bits (60), Expect = 6.1
Identities = 39/162 (24%), Positives = 70/162 (43%), Gaps = 19/162 (11%)
Query: 702 SFDEDYTASTVSTDGEYSDEGSFNGDIDRTQYLNEEETYNPRGKVAHPVSTKDTIVEKDE 761
S D++ S +T+ E SD+ SF+ + E T P +ST ++ E
Sbjct: 360 STDQELPQSIPATESETSDDSSFSYKRSPCKRKLVEATAQP------AIST--SVAE--G 409
Query: 762 FSESQTLKPLPDPNFVPKPILKRRE-IPEQSPAQN-LMPPKSFVSAPKTEAKRQEKLTLF 819
S +Q KPLP+ + K ++R + E+ A + M K + A T+ Q+ +
Sbjct: 410 ASLAQVSKPLPER--LQKDSMRRSSPLNEKVTASSERMKKKLALFASSTDTSMQKTID-- 465
Query: 820 KKITKMPVQKPFNFPKILSKNSMNKKQNTSEPEIEKIISTNE 861
+ P+++P N P N + + + + K I+ NE
Sbjct: 466 ---SSFPLKQPINKPSSNPNNLLLNDPSPASTPVAKTINLNE 504
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 28.3 bits (60), Expect = 6.1
Identities = 24/106 (22%), Positives = 49/106 (46%), Gaps = 7/106 (6%)
Query: 897 NTEDLKEVAEKQNIERTKTQNDGITETNTSSQSNMPKTIIQNKPQNRV-DKNIKQRKQSS 955
N+ + V+E + +G+ E + +SN + + PQN + DK+ ++SS
Sbjct: 64 NSSSQQSVSEIDIQLPSSEPKEGVKEESNLIESNSLDNVQEINPQNTIGDKSAHTEEESS 123
Query: 956 NN----ITVDRNKSKLEAPPFSDKHNQTQKKSIPQ--IQTVLKKTE 995
N+ IT S + P D+ ++ ++ + + ++T LK E
Sbjct: 124 NDNLVKITAGTIISDIMDEPVVDEDDKLSEEDLSKEDLETTLKGDE 169
>SPBC1604.18c |||vacuolar sorting protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 449
Score = 28.3 bits (60), Expect = 6.1
Identities = 14/53 (26%), Positives = 25/53 (47%)
Query: 667 EILIESEFVDNNVYSNDTRQLSRESMASDGKWQQISFDEDYTASTVSTDGEYS 719
+ L SE +D + + + + + E A + +WQ + +E VST G S
Sbjct: 365 DTLARSEEIDATIQTYNPQNIDLEDEAVEKEWQDLVAEEQKVEDIVSTLGNVS 417
>SPAC144.05 |||ATP-dependent DNA helicase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1375
Score = 28.3 bits (60), Expect = 6.1
Identities = 12/34 (35%), Positives = 20/34 (58%)
Query: 994 TERATIVIPINYQELETKAKKKVRSIIDYTVDMC 1027
T R ++V NYQ+L ++A K + D +D+C
Sbjct: 529 TTRLSVVEETNYQDLLSEAAKSLHFFKDRNLDLC 562
>SPAC1142.01 ||SPAC17G6.18|DUF654 family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 667
Score = 28.3 bits (60), Expect = 6.1
Identities = 43/190 (22%), Positives = 84/190 (44%), Gaps = 27/190 (14%)
Query: 836 ILSKNSMNKKQNTSEPEI--EKIISTNEKNLDKINDEGRTVIDYYGNIVKEYGTHKKSTP 893
++S ++ K Q + E+ E + S ++++ + + G+ V++ + + KE
Sbjct: 11 LMSSRALRKLQRQRQTELLEEALDSESDEDDEFSSTSGKKVVNVFEILEKENNA------ 64
Query: 894 IYLNTEDLKEVAEKQNIERTKTQNDGITETNTSSQSNMPKTIIQNKPQ--------NRVD 945
+N+E K V+E++ E I TN +++ K Q K + N+
Sbjct: 65 --INSEAEKSVSEEEQDEPLVEGESPIVSTNKKAKNKKKKKKQQKKKKVTGKRDLDNQSS 122
Query: 946 KNIK-QRKQSSNNITVDRNKSKLEAPPFSDKHNQTQKKSIPQIQTVLKKTERATIVIPIN 1004
N K + +SS NI D ++ + A K+ + Q++ V E AT IP++
Sbjct: 123 DNEKLEGLESSKNIDDDIDEIEKAAAELKLKYREQD-----QVEHVAGVEESAT--IPLD 175
Query: 1005 YQELETKAKK 1014
+EL+ K K
Sbjct: 176 -KELDEKLNK 184
>SPBC1706.01 |tea4|wsh3|tip elongation aberrant protein
Tea4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 809
Score = 28.3 bits (60), Expect = 6.1
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Query: 213 SPTIAWFKDDYEIFSSRRTAITTDESTSVLLFHQILP---SDEGEIKCTATN 261
SPT + KDD E +R+ A + S S LL LP S + + +CT ++
Sbjct: 528 SPTKGFQKDDEEDSENRKQADKVELSPSSLLRQMSLPVDSSSQSDAQCTTSS 579
>SPAC16E8.11c |tfb1||transcription factor TFIIH complex subunit
Tfb1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 477
Score = 28.3 bits (60), Expect = 6.1
Identities = 24/102 (23%), Positives = 47/102 (46%), Gaps = 11/102 (10%)
Query: 657 AKTVEKIKGPEILIESEFVDNNVYSNDTRQLSRESMASDGKWQQISFDEDYTASTVSTDG 716
+K V KIKG + L+E+ FV + Q+ E + S Q + ++ + + + D
Sbjct: 300 SKVVLKIKGQDQLLENNFVPSK------NQVGLEPLPSLEALQHLYQEDSISLNHIEHDS 353
Query: 717 EYSDEGSFNGDIDRTQYLNEEETYNPRGKVAH-PVSTKDTIV 757
+ E + + TQ + E+ + G ++ P+ K+ IV
Sbjct: 354 DSLAEAA----MQLTQSMREKHEFETHGTASNLPIDIKNEIV 391
>SPAC15A10.13 |ppk3||serine/threonine protein kinase
Ppk3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 637
Score = 27.9 bits (59), Expect = 8.1
Identities = 15/61 (24%), Positives = 28/61 (45%)
Query: 881 IVKEYGTHKKSTPIYLNTEDLKEVAEKQNIERTKTQNDGITETNTSSQSNMPKTIIQNKP 940
I+K T+K ST +Y+ TE ++ V + N + + G+ + + K I+
Sbjct: 80 IIKYLSTYKSSTHLYIATETVRPVTTELNELSAEIKTYGLWRVSAALSFLNDKNIVHGNL 139
Query: 941 Q 941
Q
Sbjct: 140 Q 140
>SPCC330.09 |||rRNA processing protein Enp2 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 634
Score = 27.9 bits (59), Expect = 8.1
Identities = 22/114 (19%), Positives = 50/114 (43%), Gaps = 3/114 (2%)
Query: 902 KEVAEKQNIERTKTQNDGITETNTSSQSNMPKTIIQNKPQNRVDKNIKQRKQSSNNITVD 961
++ E + + ++++ G+T S + I+ ++++ ++ + + VD
Sbjct: 507 EDTLEYKQLHPSRSEARGLTAAEESEEEKEHTKGIKFSSDEESLSDMEEENETFDAL-VD 565
Query: 962 RNKSKLEAPPFSDKHNQTQKKSIPQIQTVLKKTERATIVIPINYQELETKAKKK 1015
R K++ + ++K Q +S P + K E+ P+N E T KKK
Sbjct: 566 RRKTEQQVS--NEKTPQETIRSTPSGMEMTFKVEKKKKSKPVNRDEDSTSGKKK 617
>SPAC13A11.01c |rga8|SPAC2F7.18c|GTPase activating protein Rga8
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 777
Score = 27.9 bits (59), Expect = 8.1
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 883 KEYGTHKKSTPIYLNTEDLKEVAEKQNIERTKTQNDGITETNTSSQSNMPKTIIQN 938
K+Y T KK+ Y N E E+++ E +T ++ IT+ T S S +++++N
Sbjct: 135 KKYYTLKKTKSAYYNKCRNLEDYEEESKESNETTSEAITDLTTVS-SPQQQSLLEN 189
>SPAC1639.02c |trk2|SPAC1F5.12|potassium ion transporter
Trk2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 880
Score = 27.9 bits (59), Expect = 8.1
Identities = 13/27 (48%), Positives = 16/27 (59%)
Query: 914 KTQNDGITETNTSSQSNMPKTIIQNKP 940
+T NDG ET +SS SN T + N P
Sbjct: 305 ETANDGNQETVSSSNSNYSTTRVDNDP 331
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.314 0.131 0.381
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,917,003
Number of Sequences: 5004
Number of extensions: 216298
Number of successful extensions: 639
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 612
Number of HSP's gapped (non-prelim): 54
length of query: 1081
length of database: 2,362,478
effective HSP length: 80
effective length of query: 1001
effective length of database: 1,962,158
effective search space: 1964120158
effective search space used: 1964120158
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 59 (27.9 bits)
- SilkBase 1999-2023 -