Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000589-TA|BGIBMGA000589-PA|IPR000727|Target SNARE
coiled-coil region
(104 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR541873-1|CAG46671.1| 255|Homo sapiens STX6 protein. 51 6e-07
CR541856-1|CAG46654.1| 255|Homo sapiens STX6 protein. 51 6e-07
BC009944-1|AAH09944.1| 255|Homo sapiens syntaxin 6 protein. 51 6e-07
AL356267-1|CAH72301.1| 255|Homo sapiens syntaxin 6 protein. 51 6e-07
AL162431-1|CAH74088.1| 255|Homo sapiens syntaxin 6 protein. 51 6e-07
AJ002078-1|CAA05177.1| 255|Homo sapiens syntaxin 6 protein. 51 6e-07
CR457110-1|CAG33391.1| 249|Homo sapiens STX10 protein. 35 0.039
BC017237-1|AAH17237.1| 200|Homo sapiens STX10 protein protein. 35 0.039
AY778966-1|AAV48594.1| 246|Homo sapiens syntaxin 10 protein. 35 0.039
AF035531-1|AAC05087.1| 249|Homo sapiens syntaxin 10 protein. 35 0.039
BT007319-1|AAP35983.1| 236|Homo sapiens syntaxin 8 protein. 32 0.37
BC009713-1|AAH09713.1| 236|Homo sapiens syntaxin 8 protein. 32 0.37
AF115323-1|AAD20831.1| 236|Homo sapiens syntaxin 8 protein. 32 0.37
AF062077-1|AAC36466.1| 236|Homo sapiens putative protein kinase... 32 0.37
AF036715-1|AAC95285.1| 236|Homo sapiens syntaxin 8 protein. 32 0.37
AJ890451-1|CAI67595.1| 1125|Homo sapiens collagen, type XXVIII p... 31 0.48
>CR541873-1|CAG46671.1| 255|Homo sapiens STX6 protein.
Length = 255
Score = 51.2 bits (117), Expect = 6e-07
Identities = 32/87 (36%), Positives = 49/87 (56%), Gaps = 7/87 (8%)
Query: 18 REPLLGDDSPMNFGNNWTSTPKYTKYSKLANQTDSPNRFDIYDNDILSMQDKLLGNQNEQ 77
R+ LLGD NW ST KY +L + N I + + Q ++ Q+EQ
Sbjct: 120 RQALLGDSG----SQNW-STGTTDKYGRLDRELQRANSHFIEEQQ--AQQQLIVEQQDEQ 172
Query: 78 LQVISETVGSLKTVSKQIGLELDEQAV 104
L+++S ++G LK +S++IG EL+EQAV
Sbjct: 173 LELVSGSIGVLKNMSQRIGGELEEQAV 199
>CR541856-1|CAG46654.1| 255|Homo sapiens STX6 protein.
Length = 255
Score = 51.2 bits (117), Expect = 6e-07
Identities = 32/87 (36%), Positives = 49/87 (56%), Gaps = 7/87 (8%)
Query: 18 REPLLGDDSPMNFGNNWTSTPKYTKYSKLANQTDSPNRFDIYDNDILSMQDKLLGNQNEQ 77
R+ LLGD NW ST KY +L + N I + + Q ++ Q+EQ
Sbjct: 120 RQALLGDSG----SQNW-STGTTDKYGRLDRELQRANSHFIEEQQ--AQQQLIVEQQDEQ 172
Query: 78 LQVISETVGSLKTVSKQIGLELDEQAV 104
L+++S ++G LK +S++IG EL+EQAV
Sbjct: 173 LELVSGSIGVLKNMSQRIGGELEEQAV 199
>BC009944-1|AAH09944.1| 255|Homo sapiens syntaxin 6 protein.
Length = 255
Score = 51.2 bits (117), Expect = 6e-07
Identities = 32/87 (36%), Positives = 49/87 (56%), Gaps = 7/87 (8%)
Query: 18 REPLLGDDSPMNFGNNWTSTPKYTKYSKLANQTDSPNRFDIYDNDILSMQDKLLGNQNEQ 77
R+ LLGD NW ST KY +L + N I + + Q ++ Q+EQ
Sbjct: 120 RQALLGDSG----SQNW-STGTTDKYGRLDRELQRANSHFIEEQQ--AQQQLIVEQQDEQ 172
Query: 78 LQVISETVGSLKTVSKQIGLELDEQAV 104
L+++S ++G LK +S++IG EL+EQAV
Sbjct: 173 LELVSGSIGVLKNMSQRIGGELEEQAV 199
>AL356267-1|CAH72301.1| 255|Homo sapiens syntaxin 6 protein.
Length = 255
Score = 51.2 bits (117), Expect = 6e-07
Identities = 32/87 (36%), Positives = 49/87 (56%), Gaps = 7/87 (8%)
Query: 18 REPLLGDDSPMNFGNNWTSTPKYTKYSKLANQTDSPNRFDIYDNDILSMQDKLLGNQNEQ 77
R+ LLGD NW ST KY +L + N I + + Q ++ Q+EQ
Sbjct: 120 RQALLGDSG----SQNW-STGTTDKYGRLDRELQRANSHFIEEQQ--AQQQLIVEQQDEQ 172
Query: 78 LQVISETVGSLKTVSKQIGLELDEQAV 104
L+++S ++G LK +S++IG EL+EQAV
Sbjct: 173 LELVSGSIGVLKNMSQRIGGELEEQAV 199
>AL162431-1|CAH74088.1| 255|Homo sapiens syntaxin 6 protein.
Length = 255
Score = 51.2 bits (117), Expect = 6e-07
Identities = 32/87 (36%), Positives = 49/87 (56%), Gaps = 7/87 (8%)
Query: 18 REPLLGDDSPMNFGNNWTSTPKYTKYSKLANQTDSPNRFDIYDNDILSMQDKLLGNQNEQ 77
R+ LLGD NW ST KY +L + N I + + Q ++ Q+EQ
Sbjct: 120 RQALLGDSG----SQNW-STGTTDKYGRLDRELQRANSHFIEEQQ--AQQQLIVEQQDEQ 172
Query: 78 LQVISETVGSLKTVSKQIGLELDEQAV 104
L+++S ++G LK +S++IG EL+EQAV
Sbjct: 173 LELVSGSIGVLKNMSQRIGGELEEQAV 199
>AJ002078-1|CAA05177.1| 255|Homo sapiens syntaxin 6 protein.
Length = 255
Score = 51.2 bits (117), Expect = 6e-07
Identities = 32/87 (36%), Positives = 49/87 (56%), Gaps = 7/87 (8%)
Query: 18 REPLLGDDSPMNFGNNWTSTPKYTKYSKLANQTDSPNRFDIYDNDILSMQDKLLGNQNEQ 77
R+ LLGD NW ST KY +L + N I + + Q ++ Q+EQ
Sbjct: 120 RQALLGDSG----SQNW-STGTTDKYGRLDRELQRANSHFIEEQQ--AQQQLIVEQQDEQ 172
Query: 78 LQVISETVGSLKTVSKQIGLELDEQAV 104
L+++S ++G LK +S++IG EL+EQAV
Sbjct: 173 LELVSGSIGVLKNMSQRIGGELEEQAV 199
>CR457110-1|CAG33391.1| 249|Homo sapiens STX10 protein.
Length = 249
Score = 35.1 bits (77), Expect = 0.039
Identities = 15/46 (32%), Positives = 30/46 (65%)
Query: 59 YDNDILSMQDKLLGNQNEQLQVISETVGSLKTVSKQIGLELDEQAV 104
Y + + Q ++ Q++QL+++S ++ LK +S ++G ELDEQ +
Sbjct: 148 YIEEQQATQQLIMDEQDQQLEMVSGSIQVLKHMSGRVGEELDEQGI 193
>BC017237-1|AAH17237.1| 200|Homo sapiens STX10 protein protein.
Length = 200
Score = 35.1 bits (77), Expect = 0.039
Identities = 15/46 (32%), Positives = 30/46 (65%)
Query: 59 YDNDILSMQDKLLGNQNEQLQVISETVGSLKTVSKQIGLELDEQAV 104
Y + + Q ++ Q++QL+++S ++ LK +S ++G ELDEQ +
Sbjct: 99 YIEEQQATQQLIMDEQDQQLEMVSGSIQVLKHMSGRVGEELDEQGI 144
>AY778966-1|AAV48594.1| 246|Homo sapiens syntaxin 10 protein.
Length = 246
Score = 35.1 bits (77), Expect = 0.039
Identities = 15/46 (32%), Positives = 30/46 (65%)
Query: 59 YDNDILSMQDKLLGNQNEQLQVISETVGSLKTVSKQIGLELDEQAV 104
Y + + Q ++ Q++QL+++S ++ LK +S ++G ELDEQ +
Sbjct: 148 YIEEQQATQQLIMDEQDQQLEMVSGSIQVLKHMSGRVGEELDEQGI 193
>AF035531-1|AAC05087.1| 249|Homo sapiens syntaxin 10 protein.
Length = 249
Score = 35.1 bits (77), Expect = 0.039
Identities = 15/46 (32%), Positives = 30/46 (65%)
Query: 59 YDNDILSMQDKLLGNQNEQLQVISETVGSLKTVSKQIGLELDEQAV 104
Y + + Q ++ Q++QL+++S ++ LK +S ++G ELDEQ +
Sbjct: 148 YIEEQQATQQLIMDEQDQQLEMVSGSIQVLKHMSGRVGEELDEQGI 193
>BT007319-1|AAP35983.1| 236|Homo sapiens syntaxin 8 protein.
Length = 236
Score = 31.9 bits (69), Expect = 0.37
Identities = 14/42 (33%), Positives = 24/42 (57%)
Query: 61 NDILSMQDKLLGNQNEQLQVISETVGSLKTVSKQIGLELDEQ 102
++I Q K++ Q+ L +S + K + ++IG ELDEQ
Sbjct: 138 DEIRQQQQKIIQEQDAGLDALSSIISRQKQMGQEIGNELDEQ 179
>BC009713-1|AAH09713.1| 236|Homo sapiens syntaxin 8 protein.
Length = 236
Score = 31.9 bits (69), Expect = 0.37
Identities = 14/42 (33%), Positives = 24/42 (57%)
Query: 61 NDILSMQDKLLGNQNEQLQVISETVGSLKTVSKQIGLELDEQ 102
++I Q K++ Q+ L +S + K + ++IG ELDEQ
Sbjct: 138 DEIRQQQQKIIQEQDAGLDALSSIISRQKQMGQEIGNELDEQ 179
>AF115323-1|AAD20831.1| 236|Homo sapiens syntaxin 8 protein.
Length = 236
Score = 31.9 bits (69), Expect = 0.37
Identities = 14/42 (33%), Positives = 24/42 (57%)
Query: 61 NDILSMQDKLLGNQNEQLQVISETVGSLKTVSKQIGLELDEQ 102
++I Q K++ Q+ L +S + K + ++IG ELDEQ
Sbjct: 138 DEIRQQQQKIIQEQDAGLDALSSIISRQKQMGQEIGNELDEQ 179
>AF062077-1|AAC36466.1| 236|Homo sapiens putative protein kinase
regulator protein.
Length = 236
Score = 31.9 bits (69), Expect = 0.37
Identities = 14/42 (33%), Positives = 24/42 (57%)
Query: 61 NDILSMQDKLLGNQNEQLQVISETVGSLKTVSKQIGLELDEQ 102
++I Q K++ Q+ L +S + K + ++IG ELDEQ
Sbjct: 138 DEIRQQQQKIIQEQDAGLDALSSIISRQKQMGQEIGNELDEQ 179
>AF036715-1|AAC95285.1| 236|Homo sapiens syntaxin 8 protein.
Length = 236
Score = 31.9 bits (69), Expect = 0.37
Identities = 14/42 (33%), Positives = 24/42 (57%)
Query: 61 NDILSMQDKLLGNQNEQLQVISETVGSLKTVSKQIGLELDEQ 102
++I Q K++ Q+ L +S + K + ++IG ELDEQ
Sbjct: 138 DEIRQQQQKIIQEQDAGLDALSSIISRQKQMGQEIGNELDEQ 179
>AJ890451-1|CAI67595.1| 1125|Homo sapiens collagen, type XXVIII
protein.
Length = 1125
Score = 31.5 bits (68), Expect = 0.48
Identities = 13/39 (33%), Positives = 21/39 (53%)
Query: 1 MKSKMSLNRNRDNDGTAREPLLGDDSPMNFGNNWTSTPK 39
+ +S+ R++D D A EP DD P + T+TP+
Sbjct: 1019 ISESLSVTRDQDEDDKAPEPTWADDLPATTSSEATTTPR 1057
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.308 0.127 0.350
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,283,581
Number of Sequences: 224733
Number of extensions: 536811
Number of successful extensions: 899
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 883
Number of HSP's gapped (non-prelim): 16
length of query: 104
length of database: 73,234,838
effective HSP length: 78
effective length of query: 26
effective length of database: 55,705,664
effective search space: 1448347264
effective search space used: 1448347264
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)
S2: 58 (27.5 bits)
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