Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000589-TA|BGIBMGA000589-PA|IPR000727|Target SNARE
coiled-coil region
(104 letters)
Database: fruitfly
52,641 sequences; 24,830,863 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT021399-1|AAX33547.1| 368|Drosophila melanogaster LD12915p pro... 65 1e-11
BT003505-1|AAO39509.1| 226|Drosophila melanogaster RE35194p pro... 65 1e-11
BT001663-1|AAN71418.1| 323|Drosophila melanogaster RE48509p pro... 65 1e-11
AY089525-1|AAL90263.1| 339|Drosophila melanogaster HL02043p pro... 65 1e-11
AE013599-1223|AAF58710.1| 226|Drosophila melanogaster CG7736-PB... 65 1e-11
AE013599-1222|AAM68721.1| 339|Drosophila melanogaster CG7736-PE... 65 1e-11
AE013599-1221|AAM68720.1| 323|Drosophila melanogaster CG7736-PD... 65 1e-11
BT011107-1|AAR82774.1| 250|Drosophila melanogaster LP02760p pro... 31 0.37
AE014296-2762|AAF49443.1| 232|Drosophila melanogaster CG4109-PA... 31 0.37
AE014134-2678|AAF53505.2| 2190|Drosophila melanogaster CG12455-P... 27 4.5
AE013599-3384|AAF46837.1| 775|Drosophila melanogaster CG10955-P... 27 6.0
AY051836-1|AAK93260.1| 578|Drosophila melanogaster LD33880p pro... 26 7.9
AF247563-1|AAF70257.1| 929|Drosophila melanogaster Scribbler sh... 26 7.9
AF220145-1|AAF43896.1| 939|Drosophila melanogaster Scribbler pr... 26 7.9
AE014134-2200|AAF53189.1| 578|Drosophila melanogaster CG6388-PA... 26 7.9
>BT021399-1|AAX33547.1| 368|Drosophila melanogaster LD12915p
protein.
Length = 368
Score = 65.3 bits (152), Expect = 1e-11
Identities = 35/76 (46%), Positives = 51/76 (67%), Gaps = 12/76 (15%)
Query: 41 TKYSKLANQTDSPNRFDI------------YDNDILSMQDKLLGNQNEQLQVISETVGSL 88
TKYSKL N DSP+ + Y + +S+Q +++ Q+EQL +IS+++G+L
Sbjct: 237 TKYSKLENALDSPSHYGQTHHGGMDSPSHRYVGETVSIQQRMIQGQDEQLDMISDSIGTL 296
Query: 89 KTVSKQIGLELDEQAV 104
KTVS+QIG+ELDEQAV
Sbjct: 297 KTVSRQIGVELDEQAV 312
Score = 38.3 bits (85), Expect = 0.002
Identities = 17/25 (68%), Positives = 20/25 (80%)
Query: 1 MKSKMSLNRNRDNDGTAREPLLGDD 25
MK KMSLNR+RD D TA +PLL +D
Sbjct: 143 MKDKMSLNRSRDRDITAHQPLLDND 167
>BT003505-1|AAO39509.1| 226|Drosophila melanogaster RE35194p
protein.
Length = 226
Score = 65.3 bits (152), Expect = 1e-11
Identities = 35/76 (46%), Positives = 51/76 (67%), Gaps = 12/76 (15%)
Query: 41 TKYSKLANQTDSPNRFDI------------YDNDILSMQDKLLGNQNEQLQVISETVGSL 88
TKYSKL N DSP+ + Y + +S+Q +++ Q+EQL +IS+++G+L
Sbjct: 95 TKYSKLENALDSPSHYGQTHHGGMDSPSHRYVGETVSIQQRMIQGQDEQLDMISDSIGTL 154
Query: 89 KTVSKQIGLELDEQAV 104
KTVS+QIG+ELDEQAV
Sbjct: 155 KTVSRQIGVELDEQAV 170
Score = 38.3 bits (85), Expect = 0.002
Identities = 17/25 (68%), Positives = 20/25 (80%)
Query: 1 MKSKMSLNRNRDNDGTAREPLLGDD 25
MK KMSLNR+RD D TA +PLL +D
Sbjct: 1 MKDKMSLNRSRDRDITAHQPLLDND 25
>BT001663-1|AAN71418.1| 323|Drosophila melanogaster RE48509p
protein.
Length = 323
Score = 65.3 bits (152), Expect = 1e-11
Identities = 35/76 (46%), Positives = 51/76 (67%), Gaps = 12/76 (15%)
Query: 41 TKYSKLANQTDSPNRFDI------------YDNDILSMQDKLLGNQNEQLQVISETVGSL 88
TKYSKL N DSP+ + Y + +S+Q +++ Q+EQL +IS+++G+L
Sbjct: 192 TKYSKLENALDSPSHYGQTHHGGMDSPSHRYVGETVSIQQRMIQGQDEQLDMISDSIGTL 251
Query: 89 KTVSKQIGLELDEQAV 104
KTVS+QIG+ELDEQAV
Sbjct: 252 KTVSRQIGVELDEQAV 267
Score = 38.3 bits (85), Expect = 0.002
Identities = 17/25 (68%), Positives = 20/25 (80%)
Query: 1 MKSKMSLNRNRDNDGTAREPLLGDD 25
MK KMSLNR+RD D TA +PLL +D
Sbjct: 98 MKDKMSLNRSRDRDITAHQPLLDND 122
>AY089525-1|AAL90263.1| 339|Drosophila melanogaster HL02043p
protein.
Length = 339
Score = 65.3 bits (152), Expect = 1e-11
Identities = 35/76 (46%), Positives = 51/76 (67%), Gaps = 12/76 (15%)
Query: 41 TKYSKLANQTDSPNRFDI------------YDNDILSMQDKLLGNQNEQLQVISETVGSL 88
TKYSKL N DSP+ + Y + +S+Q +++ Q+EQL +IS+++G+L
Sbjct: 208 TKYSKLENALDSPSHYGQTHHGGMDSPSHRYVGETVSIQQRMIQGQDEQLDMISDSIGTL 267
Query: 89 KTVSKQIGLELDEQAV 104
KTVS+QIG+ELDEQAV
Sbjct: 268 KTVSRQIGVELDEQAV 283
Score = 38.3 bits (85), Expect = 0.002
Identities = 17/25 (68%), Positives = 20/25 (80%)
Query: 1 MKSKMSLNRNRDNDGTAREPLLGDD 25
MK KMSLNR+RD D TA +PLL +D
Sbjct: 114 MKDKMSLNRSRDRDITAHQPLLDND 138
>AE013599-1223|AAF58710.1| 226|Drosophila melanogaster CG7736-PB,
isoform B protein.
Length = 226
Score = 65.3 bits (152), Expect = 1e-11
Identities = 35/76 (46%), Positives = 51/76 (67%), Gaps = 12/76 (15%)
Query: 41 TKYSKLANQTDSPNRFDI------------YDNDILSMQDKLLGNQNEQLQVISETVGSL 88
TKYSKL N DSP+ + Y + +S+Q +++ Q+EQL +IS+++G+L
Sbjct: 95 TKYSKLENALDSPSHYGQTHHGGMDSPSHRYVGETVSIQQRMIQGQDEQLDMISDSIGTL 154
Query: 89 KTVSKQIGLELDEQAV 104
KTVS+QIG+ELDEQAV
Sbjct: 155 KTVSRQIGVELDEQAV 170
Score = 38.3 bits (85), Expect = 0.002
Identities = 17/25 (68%), Positives = 20/25 (80%)
Query: 1 MKSKMSLNRNRDNDGTAREPLLGDD 25
MK KMSLNR+RD D TA +PLL +D
Sbjct: 1 MKDKMSLNRSRDRDITAHQPLLDND 25
>AE013599-1222|AAM68721.1| 339|Drosophila melanogaster CG7736-PE,
isoform E protein.
Length = 339
Score = 65.3 bits (152), Expect = 1e-11
Identities = 35/76 (46%), Positives = 51/76 (67%), Gaps = 12/76 (15%)
Query: 41 TKYSKLANQTDSPNRFDI------------YDNDILSMQDKLLGNQNEQLQVISETVGSL 88
TKYSKL N DSP+ + Y + +S+Q +++ Q+EQL +IS+++G+L
Sbjct: 208 TKYSKLENALDSPSHYGQTHHGGMDSPSHRYVGETVSIQQRMIQGQDEQLDMISDSIGTL 267
Query: 89 KTVSKQIGLELDEQAV 104
KTVS+QIG+ELDEQAV
Sbjct: 268 KTVSRQIGVELDEQAV 283
Score = 38.3 bits (85), Expect = 0.002
Identities = 17/25 (68%), Positives = 20/25 (80%)
Query: 1 MKSKMSLNRNRDNDGTAREPLLGDD 25
MK KMSLNR+RD D TA +PLL +D
Sbjct: 114 MKDKMSLNRSRDRDITAHQPLLDND 138
>AE013599-1221|AAM68720.1| 323|Drosophila melanogaster CG7736-PD,
isoform D protein.
Length = 323
Score = 65.3 bits (152), Expect = 1e-11
Identities = 35/76 (46%), Positives = 51/76 (67%), Gaps = 12/76 (15%)
Query: 41 TKYSKLANQTDSPNRFDI------------YDNDILSMQDKLLGNQNEQLQVISETVGSL 88
TKYSKL N DSP+ + Y + +S+Q +++ Q+EQL +IS+++G+L
Sbjct: 192 TKYSKLENALDSPSHYGQTHHGGMDSPSHRYVGETVSIQQRMIQGQDEQLDMISDSIGTL 251
Query: 89 KTVSKQIGLELDEQAV 104
KTVS+QIG+ELDEQAV
Sbjct: 252 KTVSRQIGVELDEQAV 267
Score = 38.3 bits (85), Expect = 0.002
Identities = 17/25 (68%), Positives = 20/25 (80%)
Query: 1 MKSKMSLNRNRDNDGTAREPLLGDD 25
MK KMSLNR+RD D TA +PLL +D
Sbjct: 98 MKDKMSLNRSRDRDITAHQPLLDND 122
>BT011107-1|AAR82774.1| 250|Drosophila melanogaster LP02760p
protein.
Length = 250
Score = 30.7 bits (66), Expect = 0.37
Identities = 12/34 (35%), Positives = 24/34 (70%)
Query: 69 KLLGNQNEQLQVISETVGSLKTVSKQIGLELDEQ 102
++L QNE L+V+S T+ + ++ Q+G E+++Q
Sbjct: 163 EMLAQQNEGLEVLSATLSRQRQLATQLGNEVEDQ 196
>AE014296-2762|AAF49443.1| 232|Drosophila melanogaster CG4109-PA
protein.
Length = 232
Score = 30.7 bits (66), Expect = 0.37
Identities = 12/34 (35%), Positives = 24/34 (70%)
Query: 69 KLLGNQNEQLQVISETVGSLKTVSKQIGLELDEQ 102
++L QNE L+V+S T+ + ++ Q+G E+++Q
Sbjct: 145 EMLAQQNEGLEVLSATLSRQRQLATQLGNEVEDQ 178
>AE014134-2678|AAF53505.2| 2190|Drosophila melanogaster CG12455-PA,
isoform A protein.
Length = 2190
Score = 27.1 bits (57), Expect = 4.5
Identities = 14/61 (22%), Positives = 28/61 (45%)
Query: 35 TSTPKYTKYSKLANQTDSPNRFDIYDNDILSMQDKLLGNQNEQLQVISETVGSLKTVSKQ 94
++T T Y L+ SP + S Q + LG+ ++++ I E + L+ + K
Sbjct: 1830 STTDNTTSYPNLSTTESSPTFDSTISHSNTSSQTRSLGSYKDKIKNIVELLKKLRKIQKT 1889
Query: 95 I 95
+
Sbjct: 1890 L 1890
>AE013599-3384|AAF46837.1| 775|Drosophila melanogaster CG10955-PA
protein.
Length = 775
Score = 26.6 bits (56), Expect = 6.0
Identities = 16/58 (27%), Positives = 24/58 (41%)
Query: 5 MSLNRNRDNDGTAREPLLGDDSPMNFGNNWTSTPKYTKYSKLANQTDSPNRFDIYDND 62
MSL + R TA + DS ++ NN P K + DS + +D+D
Sbjct: 30 MSLAKKRKKPQTAAKSSSRSDSDSDWANNKAGAPSSKKKKRQKPSRDSSSSESNWDDD 87
>AY051836-1|AAK93260.1| 578|Drosophila melanogaster LD33880p
protein.
Length = 578
Score = 26.2 bits (55), Expect = 7.9
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 4/60 (6%)
Query: 15 GTAREPLLGDDS-PMNFGN-NWTSTPKYTKYSKLANQTDSPNRFDIYDNDI--LSMQDKL 70
GT ++GD+ P ++ N N K ++ +Q D+P D YD D+ L Q KL
Sbjct: 515 GTRATIMIGDNKLPKSYRNQNKKQRHKASEQQAEDDQQDTPQAVDEYDGDVEHLPKQPKL 574
>AF247563-1|AAF70257.1| 929|Drosophila melanogaster Scribbler short
isoform protein.
Length = 929
Score = 26.2 bits (55), Expect = 7.9
Identities = 14/52 (26%), Positives = 25/52 (48%)
Query: 3 SKMSLNRNRDNDGTAREPLLGDDSPMNFGNNWTSTPKYTKYSKLANQTDSPN 54
+ +LN N TA ++ N NN ++ K+T +KLA ++ + N
Sbjct: 54 ANQALNFNNKTKATANATAASANNRHNNNNNSSAIKKHTNTNKLAGKSPACN 105
>AF220145-1|AAF43896.1| 939|Drosophila melanogaster Scribbler
protein.
Length = 939
Score = 26.2 bits (55), Expect = 7.9
Identities = 14/52 (26%), Positives = 25/52 (48%)
Query: 3 SKMSLNRNRDNDGTAREPLLGDDSPMNFGNNWTSTPKYTKYSKLANQTDSPN 54
+ +LN N TA ++ N NN ++ K+T +KLA ++ + N
Sbjct: 64 ANQALNFNNKTKATANATAASANNRHNNNNNSSAIKKHTNTNKLAGKSPACN 115
>AE014134-2200|AAF53189.1| 578|Drosophila melanogaster CG6388-PA
protein.
Length = 578
Score = 26.2 bits (55), Expect = 7.9
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 4/60 (6%)
Query: 15 GTAREPLLGDDS-PMNFGN-NWTSTPKYTKYSKLANQTDSPNRFDIYDNDI--LSMQDKL 70
GT ++GD+ P ++ N N K ++ +Q D+P D YD D+ L Q KL
Sbjct: 515 GTRATIMIGDNKLPKSYRNQNKKQRHKASEQQAEDDQQDTPQAVDEYDGDVEHLPKQPKL 574
Database: fruitfly
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 24,830,863
Number of sequences in database: 52,641
Lambda K H
0.308 0.127 0.350
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,428,034
Number of Sequences: 52641
Number of extensions: 226433
Number of successful extensions: 475
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 448
Number of HSP's gapped (non-prelim): 22
length of query: 104
length of database: 24,830,863
effective HSP length: 74
effective length of query: 30
effective length of database: 20,935,429
effective search space: 628062870
effective search space used: 628062870
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)
S2: 55 (26.2 bits)
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