Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000589-TA|BGIBMGA000589-PA|IPR000727|Target SNARE
coiled-coil region
(104 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z73911-4|CAA98141.2| 625|Caenorhabditis elegans Hypothetical pr... 29 0.47
Z98853-7|CAB57906.1| 1675|Caenorhabditis elegans Hypothetical pr... 28 1.1
Z75530-10|CAA99796.2| 1675|Caenorhabditis elegans Hypothetical p... 28 1.1
AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical ... 28 1.1
AF068721-7|AAC19264.1| 531|Caenorhabditis elegans Hypothetical ... 27 2.5
AF068721-6|AAL00880.1| 564|Caenorhabditis elegans Hypothetical ... 27 2.5
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 27 2.5
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 27 2.5
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 27 2.5
Z50109-13|CAD44092.1| 1549|Caenorhabditis elegans Hypothetical p... 27 3.3
Z50109-12|CAD44091.1| 1583|Caenorhabditis elegans Hypothetical p... 27 3.3
Z50109-11|CAD91624.1| 1520|Caenorhabditis elegans Hypothetical p... 27 3.3
Z50109-10|CAD89729.3| 1654|Caenorhabditis elegans Hypothetical p... 27 3.3
Z47810-5|CAD44133.1| 1549|Caenorhabditis elegans Hypothetical pr... 27 3.3
Z47810-4|CAD44132.1| 1583|Caenorhabditis elegans Hypothetical pr... 27 3.3
Z47810-3|CAD91632.1| 1520|Caenorhabditis elegans Hypothetical pr... 27 3.3
Z47810-2|CAD89730.3| 1654|Caenorhabditis elegans Hypothetical pr... 27 3.3
Z47810-1|CAD91631.1| 1234|Caenorhabditis elegans Hypothetical pr... 27 3.3
AF504312-1|AAM22693.1| 1583|Caenorhabditis elegans adaptor prote... 27 3.3
AF003390-4|AAB54273.1| 1165|Caenorhabditis elegans Hypothetical ... 26 4.4
Z68220-10|CAA92491.2| 1843|Caenorhabditis elegans Hypothetical p... 26 5.8
U40946-2|AAO91682.1| 780|Caenorhabditis elegans Hypothetical pr... 26 5.8
AF016682-5|AAB66184.1| 409|Caenorhabditis elegans Hypothetical ... 25 7.7
AF016451-12|AAB65998.1| 1443|Caenorhabditis elegans Hypothetical... 25 7.7
>Z73911-4|CAA98141.2| 625|Caenorhabditis elegans Hypothetical
protein T12A7.1 protein.
Length = 625
Score = 29.5 bits (63), Expect = 0.47
Identities = 21/86 (24%), Positives = 34/86 (39%), Gaps = 2/86 (2%)
Query: 2 KSKMSLN-RNRDNDGTAREPLLGDDSPMNFGNNWTSTPKYTKYSKLANQTDSPNRFDIYD 60
KS LN + R +DG++ + P W ST + + D P + YD
Sbjct: 194 KSDPYLNFKRRFDDGSSHMIHQTEVKPKTLNPRW-STVLISTQALCGKNMDRPIIIECYD 252
Query: 61 NDILSMQDKLLGNQNEQLQVISETVG 86
++ QD ++G L + E G
Sbjct: 253 HEKFKKQDDIIGTAQTTLNTLIEQAG 278
>Z98853-7|CAB57906.1| 1675|Caenorhabditis elegans Hypothetical protein
C47E8.8 protein.
Length = 1675
Score = 28.3 bits (60), Expect = 1.1
Identities = 16/46 (34%), Positives = 22/46 (47%)
Query: 2 KSKMSLNRNRDNDGTAREPLLGDDSPMNFGNNWTSTPKYTKYSKLA 47
K ++ N+ N R+ LLGD S + + TS P K KLA
Sbjct: 1373 KKLTKISGNKKNPAILRKRLLGDSSDKSDKDERTSCPSSKKRPKLA 1418
>Z75530-10|CAA99796.2| 1675|Caenorhabditis elegans Hypothetical
protein C47E8.8 protein.
Length = 1675
Score = 28.3 bits (60), Expect = 1.1
Identities = 16/46 (34%), Positives = 22/46 (47%)
Query: 2 KSKMSLNRNRDNDGTAREPLLGDDSPMNFGNNWTSTPKYTKYSKLA 47
K ++ N+ N R+ LLGD S + + TS P K KLA
Sbjct: 1373 KKLTKISGNKKNPAILRKRLLGDSSDKSDKDERTSCPSSKKRPKLA 1418
>AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical
protein R11E3.3 protein.
Length = 931
Score = 28.3 bits (60), Expect = 1.1
Identities = 14/52 (26%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 52 SPNRFDIYDNDILSMQDKLLGNQNEQLQVISETVGSLKTVSKQIGLELDEQA 103
SPN F Y D+ + QD +L + + + +I+ ++ ++++ L +DE A
Sbjct: 540 SPNLFTFYLKDMPTQQDTMLISYADDMSIIARD-KKIEKAAEKVQLHIDEIA 590
>AF068721-7|AAC19264.1| 531|Caenorhabditis elegans Hypothetical
protein ZK1055.6a protein.
Length = 531
Score = 27.1 bits (57), Expect = 2.5
Identities = 14/55 (25%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Query: 42 KYSKLANQTDSPNRFDIYDNDILSMQDKLLGNQNEQLQVISETVGSLKTVSKQIG 96
K L ++TDSP ++ L + + NQ +Q ++ + +G L+ +IG
Sbjct: 39 KLPSLNSETDSPKIAELRSE--LDKYNAIRNNQEDQRDILKKKIGGLERTVGRIG 91
>AF068721-6|AAL00880.1| 564|Caenorhabditis elegans Hypothetical
protein ZK1055.6b protein.
Length = 564
Score = 27.1 bits (57), Expect = 2.5
Identities = 14/55 (25%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Query: 42 KYSKLANQTDSPNRFDIYDNDILSMQDKLLGNQNEQLQVISETVGSLKTVSKQIG 96
K L ++TDSP ++ L + + NQ +Q ++ + +G L+ +IG
Sbjct: 72 KLPSLNSETDSPKIAELRSE--LDKYNAIRNNQEDQRDILKKKIGGLERTVGRIG 124
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 27.1 bits (57), Expect = 2.5
Identities = 12/30 (40%), Positives = 15/30 (50%)
Query: 32 NNWTSTPKYTKYSKLANQTDSPNRFDIYDN 61
N W P S L ++TDS FD Y+N
Sbjct: 95 NQWGGAPAEYSESNLFHRTDSGINFDKYEN 124
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 27.1 bits (57), Expect = 2.5
Identities = 12/30 (40%), Positives = 15/30 (50%)
Query: 32 NNWTSTPKYTKYSKLANQTDSPNRFDIYDN 61
N W P S L ++TDS FD Y+N
Sbjct: 79 NQWGGAPAEYSESNLFHRTDSGINFDKYEN 108
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 27.1 bits (57), Expect = 2.5
Identities = 12/30 (40%), Positives = 15/30 (50%)
Query: 32 NNWTSTPKYTKYSKLANQTDSPNRFDIYDN 61
N W P S L ++TDS FD Y+N
Sbjct: 76 NQWGGAPAEYSESNLFHRTDSGINFDKYEN 105
>Z50109-13|CAD44092.1| 1549|Caenorhabditis elegans Hypothetical
protein F45E10.1b protein.
Length = 1549
Score = 26.6 bits (56), Expect = 3.3
Identities = 11/25 (44%), Positives = 18/25 (72%)
Query: 77 QLQVISETVGSLKTVSKQIGLELDE 101
++ V+ ETV LKT +KQ+ E+D+
Sbjct: 1051 EVDVLRETVNKLKTENKQLKKEVDK 1075
>Z50109-12|CAD44091.1| 1583|Caenorhabditis elegans Hypothetical
protein F45E10.1a protein.
Length = 1583
Score = 26.6 bits (56), Expect = 3.3
Identities = 11/25 (44%), Positives = 18/25 (72%)
Query: 77 QLQVISETVGSLKTVSKQIGLELDE 101
++ V+ ETV LKT +KQ+ E+D+
Sbjct: 1085 EVDVLRETVNKLKTENKQLKKEVDK 1109
>Z50109-11|CAD91624.1| 1520|Caenorhabditis elegans Hypothetical
protein F45E10.1d protein.
Length = 1520
Score = 26.6 bits (56), Expect = 3.3
Identities = 11/25 (44%), Positives = 18/25 (72%)
Query: 77 QLQVISETVGSLKTVSKQIGLELDE 101
++ V+ ETV LKT +KQ+ E+D+
Sbjct: 1022 EVDVLRETVNKLKTENKQLKKEVDK 1046
>Z50109-10|CAD89729.3| 1654|Caenorhabditis elegans Hypothetical
protein F45E10.1c protein.
Length = 1654
Score = 26.6 bits (56), Expect = 3.3
Identities = 11/25 (44%), Positives = 18/25 (72%)
Query: 77 QLQVISETVGSLKTVSKQIGLELDE 101
++ V+ ETV LKT +KQ+ E+D+
Sbjct: 1156 EVDVLRETVNKLKTENKQLKKEVDK 1180
>Z47810-5|CAD44133.1| 1549|Caenorhabditis elegans Hypothetical protein
F45E10.1b protein.
Length = 1549
Score = 26.6 bits (56), Expect = 3.3
Identities = 11/25 (44%), Positives = 18/25 (72%)
Query: 77 QLQVISETVGSLKTVSKQIGLELDE 101
++ V+ ETV LKT +KQ+ E+D+
Sbjct: 1051 EVDVLRETVNKLKTENKQLKKEVDK 1075
>Z47810-4|CAD44132.1| 1583|Caenorhabditis elegans Hypothetical protein
F45E10.1a protein.
Length = 1583
Score = 26.6 bits (56), Expect = 3.3
Identities = 11/25 (44%), Positives = 18/25 (72%)
Query: 77 QLQVISETVGSLKTVSKQIGLELDE 101
++ V+ ETV LKT +KQ+ E+D+
Sbjct: 1085 EVDVLRETVNKLKTENKQLKKEVDK 1109
>Z47810-3|CAD91632.1| 1520|Caenorhabditis elegans Hypothetical protein
F45E10.1d protein.
Length = 1520
Score = 26.6 bits (56), Expect = 3.3
Identities = 11/25 (44%), Positives = 18/25 (72%)
Query: 77 QLQVISETVGSLKTVSKQIGLELDE 101
++ V+ ETV LKT +KQ+ E+D+
Sbjct: 1022 EVDVLRETVNKLKTENKQLKKEVDK 1046
>Z47810-2|CAD89730.3| 1654|Caenorhabditis elegans Hypothetical protein
F45E10.1c protein.
Length = 1654
Score = 26.6 bits (56), Expect = 3.3
Identities = 11/25 (44%), Positives = 18/25 (72%)
Query: 77 QLQVISETVGSLKTVSKQIGLELDE 101
++ V+ ETV LKT +KQ+ E+D+
Sbjct: 1156 EVDVLRETVNKLKTENKQLKKEVDK 1180
>Z47810-1|CAD91631.1| 1234|Caenorhabditis elegans Hypothetical
protein F45E10.1e protein.
Length = 1234
Score = 26.6 bits (56), Expect = 3.3
Identities = 11/25 (44%), Positives = 18/25 (72%)
Query: 77 QLQVISETVGSLKTVSKQIGLELDE 101
++ V+ ETV LKT +KQ+ E+D+
Sbjct: 736 EVDVLRETVNKLKTENKQLKKEVDK 760
>AF504312-1|AAM22693.1| 1583|Caenorhabditis elegans adaptor protein
UNC-53 protein.
Length = 1583
Score = 26.6 bits (56), Expect = 3.3
Identities = 11/25 (44%), Positives = 18/25 (72%)
Query: 77 QLQVISETVGSLKTVSKQIGLELDE 101
++ V+ ETV LKT +KQ+ E+D+
Sbjct: 1085 EVDVLRETVNKLKTENKQLKKEVDK 1109
>AF003390-4|AAB54273.1| 1165|Caenorhabditis elegans Hypothetical
protein R155.3 protein.
Length = 1165
Score = 26.2 bits (55), Expect = 4.4
Identities = 15/61 (24%), Positives = 30/61 (49%)
Query: 35 TSTPKYTKYSKLANQTDSPNRFDIYDNDILSMQDKLLGNQNEQLQVISETVGSLKTVSKQ 94
T+T + KL + D + D+ +++ ++D+L L+ ++ G LKT S +
Sbjct: 465 TATRGISNMQKLVDFKDLADIGDLVKSEVEKVKDQLNDENVANLKALAGIEGQLKTASGE 524
Query: 95 I 95
I
Sbjct: 525 I 525
>Z68220-10|CAA92491.2| 1843|Caenorhabditis elegans Hypothetical
protein T20D3.11 protein.
Length = 1843
Score = 25.8 bits (54), Expect = 5.8
Identities = 12/25 (48%), Positives = 13/25 (52%)
Query: 26 SPMNFGNNWTSTPKYTKYSKLANQT 50
SP + NW S K KLANQT
Sbjct: 195 SPRQYLTNWWSDTLVKKLHKLANQT 219
>U40946-2|AAO91682.1| 780|Caenorhabditis elegans Hypothetical
protein W05H9.4 protein.
Length = 780
Score = 25.8 bits (54), Expect = 5.8
Identities = 13/51 (25%), Positives = 26/51 (50%)
Query: 52 SPNRFDIYDNDILSMQDKLLGNQNEQLQVISETVGSLKTVSKQIGLELDEQ 102
+P + YD ++ D++ G+QN ++S+ G + + IG E D +
Sbjct: 682 NPYSDEEYDTELEDEDDEVDGDQNTGENLLSKMFGEVSLGAVSIGSENDTE 732
>AF016682-5|AAB66184.1| 409|Caenorhabditis elegans Hypothetical
protein T07D3.4 protein.
Length = 409
Score = 25.4 bits (53), Expect = 7.7
Identities = 12/35 (34%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Query: 38 PKYTKYSKLANQTDSPN--RFDIYDNDILSMQDKL 70
PKY +++ L N+T PN R IY + +S+ +++
Sbjct: 33 PKYGRFAGLQNETLLPNSARVPIYHTNCISILNQM 67
>AF016451-12|AAB65998.1| 1443|Caenorhabditis elegans Hypothetical
protein C03A7.1 protein.
Length = 1443
Score = 25.4 bits (53), Expect = 7.7
Identities = 13/49 (26%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Query: 44 SKLANQTDSP-NRFDIYDNDILSMQDKLLGNQNEQLQVISETVGSLKTV 91
S + N+ P N+F I +L + N + + I +T+GSL ++
Sbjct: 501 SVMKNRNLKPTNKFMILKTHLLGKARDCISNSSAPAEAIEKTIGSLNSI 549
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.308 0.127 0.350
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,735,231
Number of Sequences: 27539
Number of extensions: 113612
Number of successful extensions: 254
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 231
Number of HSP's gapped (non-prelim): 29
length of query: 104
length of database: 12,573,161
effective HSP length: 71
effective length of query: 33
effective length of database: 10,617,892
effective search space: 350390436
effective search space used: 350390436
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)
S2: 53 (25.4 bits)
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