Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000587-TA|BGIBMGA000587-PA|IPR000421|Coagulation factor
5/8 type, C-terminal, IPR001245|Tyrosine protein kinase,
IPR011009|Protein kinase-like, IPR008979|Galactose-binding like,
IPR008266|Tyrosine protein kinase, active site, IPR000719|Protein
kinase
         (965 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...   122   9e-30
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    30   0.066
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    23   7.6  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score =  122 bits (295), Expect = 9e-30
 Identities = 69/164 (42%), Positives = 93/164 (56%), Gaps = 8/164 (4%)

Query: 793 LLHIATQIAAGMQYLESLNFVHRDLAARNCLIGKGYQIKISDFGTDNEAYTCDYYKVDGR 852
           LL IA Q+A GM++L     VHRDLAARN L+ + + +K+SDFG   + Y  + Y  +G 
Sbjct: 594 LLSIARQVALGMEHLAKTRVVHRDLAARNVLVCENHTVKVSDFGLSRDVYQDNVYCKNGG 653

Query: 853 VPLPLRWAAWESVLRGKYTTKSDVWAFAVTLHEIYSLCRRRPYEHLTDCEVLDNLSHLQA 912
             LP+RW A ES+   +YTT SDVW+F V L EI +L    PY  +   E+LD L     
Sbjct: 654 GKLPVRWMALESLTHQRYTTYSDVWSFGVLLWEIVTL-GGTPYVGVHSSELLDFLK---- 708

Query: 913 DDGMFECVDRAPGCPRDLYELMLECWRRDELDRPTFGEIHLFLQ 956
             G    + R   C  DLY +ML CW+    +RPTF E+   L+
Sbjct: 709 -SG--NRLARPANCSPDLYAVMLNCWKECPKNRPTFTELSKSLE 749



 Score = 39.5 bits (88), Expect = 1e-04
 Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 11/98 (11%)

Query: 692 LAEGAFGTVYVAEADGVPEYNGAITSEKRLVAVKFLCHDATLKEREEFERDVRILAALSS 751
           + EGAFG V  A  D + E N      K  VAVK L    T +E  +F +++ I+ ++  
Sbjct: 457 IGEGAFGIVRRAFLD-LKEDN------KTQVAVKMLKESPTSEEIRQFTQEINIMKSVRQ 509

Query: 752 -PHLARVLGAC---RSPPLAVVLEYLELGDLCAFLRAA 785
            P++  ++G     R+    +V+EY   GDL  +LR A
Sbjct: 510 HPYIVSLIGCVTEGRAEGPLLVVEYCSRGDLQTYLRTA 547


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 30.3 bits (65), Expect = 0.066
 Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 5/62 (8%)

Query: 620 GETLSQQATELVGEPMDTLPDLGTRRSLN----PSVRSKQSTRSPSQQEILLDLKRRLET 675
           G ++S Q T   G PMD    +G+   +N    P ++ K++TR  SQQE  L  + R   
Sbjct: 84  GASISPQNTPPAGYPMDVPHGMGSP-GVNVPEYPWMKEKKTTRKSSQQENGLPRRLRTAY 142

Query: 676 TN 677
           TN
Sbjct: 143 TN 144


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 11/39 (28%), Positives = 17/39 (43%)

Query: 588 DFKDSNTALSDSSNYDYAVPELSSAPLLTKRMGETLSQQ 626
           DF   N  LS + N D  +P  S    + K++ +    Q
Sbjct: 197 DFSKLNHLLSGTENLDLVLPIYSQLVFMCKKINKLYGHQ 235


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.318    0.135    0.414 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 231,980
Number of Sequences: 317
Number of extensions: 10187
Number of successful extensions: 22
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 16
Number of HSP's gapped (non-prelim): 5
length of query: 965
length of database: 114,650
effective HSP length: 63
effective length of query: 902
effective length of database: 94,679
effective search space: 85400458
effective search space used: 85400458
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 47 (23.0 bits)