Silkworm BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000587-TA|BGIBMGA000587-PA|IPR000421|Coagulation factor
5/8 type, C-terminal, IPR001245|Tyrosine protein kinase,
IPR011009|Protein kinase-like, IPR008979|Galactose-binding like,
IPR008266|Tyrosine protein kinase, active site, IPR000719|Protein
kinase
         (965 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.   126   7e-31
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    52   3e-08
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    52   3e-08
AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C prot...    48   5e-07
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                43   1e-05
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    41   6e-05
AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II ...    32   0.026
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    24   5.2  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    24   6.8  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    23   9.0  

>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score =  126 bits (305), Expect = 7e-31
 Identities = 78/234 (33%), Positives = 125/234 (53%), Gaps = 13/234 (5%)

Query: 722 VAVKFLCHDATLKEREEFERDVRILAALSSPHLARVLGAC-RSPPLAVVLEYLELGDLCA 780
           VA+K L   +  K R +F  +  I+     P++  + G   +S P+ ++ E++E G L  
Sbjct: 664 VAIKTLKPGSADKARNDFLTEASIMGQFEHPNVIFLQGVVTKSNPVMIITEFMENGSLDT 723

Query: 781 FLRAAIPP-TAATLLHIATQIAAGMQYLESLNFVHRDLAARNCLIGKGYQIKISDFGTDN 839
           FLRA         L+ +   IA+GMQYL  +N+VHRDLAARN L+      KI+DFG   
Sbjct: 724 FLRANDGKFQVLQLVGMLRGIASGMQYLAEMNYVHRDLAARNVLVNAALVCKIADFGLSR 783

Query: 840 --EAYTCDYYKVDGRVPLPLRWAAWESVLRGKYTTKSDVWAFAVTLHEIYSLCRRRPYEH 897
             E+ T   Y   G   +P+RW A E++   K+T+ SDVW+  +   E+ S    RPY +
Sbjct: 784 EIESATEGAYTTRGG-KIPVRWTAPEAIAFRKFTSASDVWSMGIVCWEVMSY-GERPYWN 841

Query: 898 LTDCEVLDNLSHLQADDGMFECVDRAPGCPRDLYELMLECWRRDELDRPTFGEI 951
            ++ +V+ ++     + G    +     CP  +Y+LML+CW+++   RPTF  +
Sbjct: 842 WSNQDVIKSI-----EKGY--RLPAPMDCPEAIYQLMLDCWQKERTHRPTFANL 888


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 51.6 bits (118), Expect = 3e-08
 Identities = 43/161 (26%), Positives = 72/161 (44%), Gaps = 11/161 (6%)

Query: 794 LHIATQIAAGMQYLESLNFVHRDLAARNCLIGKGYQIKISDFGTDNEAYTCDYYKVDGRV 853
           + IA  +  G++YL S   VHRD+  +N L+    + K++DFG        +   +   V
Sbjct: 700 IQIALDVLEGIRYLHSQGLVHRDVKLKNVLLDIENRAKLTDFG----FCITEVMMLGSIV 755

Query: 854 PLPLRWAAWESVLRGKYTTKSDVWAFAVTLHEIYSLCRRRPY--EHLTDCEVL-DNLSHL 910
             P+  A    +L G Y +  DV+AF +    + +   R PY  E   + E+L  ++   
Sbjct: 756 GTPVHMA--PELLSGHYDSSVDVYAFGILFWYLCAGHVRLPYTFEQFHNKELLWTSVKKA 813

Query: 911 QADDGMFECVDRAPGCPRDLYELMLECWRRDELDRPTFGEI 951
               G+    +R P    + + LM +CW  +   RP  G I
Sbjct: 814 LMIVGIRP--ERLPSFDDECWRLMEQCWSGEPSKRPLLGAI 852


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 51.6 bits (118), Expect = 3e-08
 Identities = 43/161 (26%), Positives = 72/161 (44%), Gaps = 11/161 (6%)

Query: 794 LHIATQIAAGMQYLESLNFVHRDLAARNCLIGKGYQIKISDFGTDNEAYTCDYYKVDGRV 853
           + IA  +  G++YL S   VHRD+  +N L+    + K++DFG        +   +   V
Sbjct: 738 IQIALDVLEGIRYLHSQGLVHRDVKLKNVLLDIENRAKLTDFG----FCITEVMMLGSIV 793

Query: 854 PLPLRWAAWESVLRGKYTTKSDVWAFAVTLHEIYSLCRRRPY--EHLTDCEVL-DNLSHL 910
             P+  A    +L G Y +  DV+AF +    + +   R PY  E   + E+L  ++   
Sbjct: 794 GTPVHMA--PELLSGHYDSSVDVYAFGILFWYLCAGHVRLPYTFEQFHNKELLWTSVKKA 851

Query: 911 QADDGMFECVDRAPGCPRDLYELMLECWRRDELDRPTFGEI 951
               G+    +R P    + + LM +CW  +   RP  G I
Sbjct: 852 LMIVGIRP--ERLPSFDDECWRLMEQCWSGEPSKRPLLGAI 890


>AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C
           protein.
          Length = 149

 Score = 47.6 bits (108), Expect = 5e-07
 Identities = 38/129 (29%), Positives = 61/129 (47%), Gaps = 4/129 (3%)

Query: 721 LVAVKFLCHDATLKERE-EFER-DVRILAALSSPHLARVLGAC--RSPPLAVVLEYLELG 776
           L A+K L  D  +++ + E    + R+LA  + P     L +C      L  V+EY+  G
Sbjct: 11  LYAIKILKKDIIIQDDDVECTMVEKRVLALSTKPPFLVQLHSCFQTMDRLYFVMEYVNGG 70

Query: 777 DLCAFLRAAIPPTAATLLHIATQIAAGMQYLESLNFVHRDLAARNCLIGKGYQIKISDFG 836
           DL   ++          +  A++IA G+ +L     V+RDL   N L+ +   IKI+DFG
Sbjct: 71  DLMYQIQQCGKFKEPVAVFYASEIAIGLFFLHGRGIVYRDLKLDNVLLDQDGHIKIADFG 130

Query: 837 TDNEAYTCD 845
              E  + D
Sbjct: 131 MCKEGISGD 139


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 42.7 bits (96), Expect = 1e-05
 Identities = 38/158 (24%), Positives = 70/158 (44%), Gaps = 13/158 (8%)

Query: 796 IATQIAAGMQYLESLNFVHRDLAARNCLIGKGYQIKISDFGTDNEAYTCDYYKVDGRVPL 855
           I   I   +Q+  +   VH D+  +N L+ K  Q K++DFG  +        ++D     
Sbjct: 160 ILKSITCALQFCHNAGIVHADVKPKNILMSKNGQPKLTDFG--SSVLIGAPNEIDKFYGT 217

Query: 856 PLRWAAWESVLRGKYTTKSDVWAFAVTLHEIYSLCRRRPYEHLTDCEV--LDNLSHLQAD 913
           P  + A E + + + T  +D+++  +   ++  L R+ P+  L    +  L    H   D
Sbjct: 218 P-GYTAPEVIKQNRPTPAADIYSLGIVAWQM--LFRKLPFAGLHSHTIIYLSAKGHRPID 274

Query: 914 DGMFECVDRAPGCPRDLYELMLECWRRDELDRPTFGEI 951
           D +    D   G  + LY+ M   W ++  +RPT  E+
Sbjct: 275 DNI---DDEFKGTYKTLYKQM---WSQNITERPTTNEV 306


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 40.7 bits (91), Expect = 6e-05
 Identities = 42/202 (20%), Positives = 79/202 (39%), Gaps = 11/202 (5%)

Query: 686 LRMISKLAEGAFGTVYVAEADGVPEYNGAITSEKRLVAVKFLCHDATLKEREEFERDVRI 745
           LR ++ L  G FG V + +  G    + A+   K+   V+        ++++    + RI
Sbjct: 367 LRPLATLGVGGFGRVELVQIAGDSSRSFALKQMKKAQIVE-------TRQQQHIMSEKRI 419

Query: 746 LAALSSPHLARVLGACRSPP-LAVVLEYLELGDLCAFLRAAIPPTAATLLHIATQIAAGM 804
           +       + ++    +    L +++E    G+L   LR        T       +    
Sbjct: 420 MGEADCDFVVKLFKTFKDRKYLYMLMEACLGGELWTVLRDKGHFDDGTTRFYTACVVEAF 479

Query: 805 QYLESLNFVHRDLAARNCLIGKGYQIKISDFGTDNEAYTCDYYKVDGRVPLPLRWAAWES 864
            YL S N ++RDL   N L+     +K+ DFG    A   D+ +          + A E 
Sbjct: 480 DYLHSRNIIYRDLKPENLLLDSQGYVKLVDFGF---AKRLDHGRKTWTFCGTPEYVAPEV 536

Query: 865 VLRGKYTTKSDVWAFAVTLHEI 886
           +L   +   +D W+  V + E+
Sbjct: 537 ILNKGHDISADYWSLGVLMFEL 558


>AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II
           protein.
          Length = 190

 Score = 31.9 bits (69), Expect = 0.026
 Identities = 26/93 (27%), Positives = 39/93 (41%), Gaps = 5/93 (5%)

Query: 795 HIATQIAAGMQYLESLNFVHRDLAARNCLI---GKGYQIKISDFGTDNEAYTCDYYKVDG 851
           H   QI   + +      VHRDL   N L+    KG  +K++DFG   E    +     G
Sbjct: 13  HCIQQILESVHHCHHNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQG-EAQAWFG 71

Query: 852 RVPLPLRWAAWESVLRGKYTTKSDVWAFAVTLH 884
               P  + + E + +  Y    D+WA  V L+
Sbjct: 72  FAGTP-GYLSPEVLKKEPYGKPVDIWACGVILY 103


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 24.2 bits (50), Expect = 5.2
 Identities = 12/49 (24%), Positives = 24/49 (48%), Gaps = 1/49 (2%)

Query: 674 ETTNVIEFPRHRLR-MISKLAEGAFGTVYVAEADGVPEYNGAITSEKRL 721
           E  +V + P  R R  +    E   GT+ V  ++G+  ++G +  ++ L
Sbjct: 383 ENESVDKHPNRRARGQLRTKIESGEGTIPVKSSEGIQTWDGVLMGQRLL 431


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 23.8 bits (49), Expect = 6.8
 Identities = 14/52 (26%), Positives = 21/52 (40%)

Query: 138 LEPPIWASKDYQQGLQLNQDIKGGAWCPRSQITTESTEWLEIDLHTVHVITG 189
           +EP +   +      QLN D++ G   P  +    S+       HTV   TG
Sbjct: 251 IEPTVQQHQPVTVNRQLNSDVQPGHGSPPVKQHRSSSASTTCSGHTVRCFTG 302


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 23.4 bits (48), Expect = 9.0
 Identities = 12/25 (48%), Positives = 17/25 (68%), Gaps = 2/25 (8%)

Query: 731 ATLKEREEFERDVRILAALSSPHLA 755
           +T++EREEF R  R+  A  +PH A
Sbjct: 590 STVEEREEFRRQERMRYA--APHKA 612


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.318    0.135    0.414 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 287,429
Number of Sequences: 429
Number of extensions: 12469
Number of successful extensions: 33
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 19
Number of HSP's gapped (non-prelim): 11
length of query: 965
length of database: 140,377
effective HSP length: 64
effective length of query: 901
effective length of database: 112,921
effective search space: 101741821
effective search space used: 101741821
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 48 (23.4 bits)