GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000586-TA|BGIBMGA000586-PA|IPR002502|N-acetylmuramoyl-L-
alanine amidase, family 2, IPR006619|Animal peptidoglycan recognition
protein PGRP
         (253 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    26   0.91 
AY823259-1|AAX18444.1|  194|Anopheles gambiae pburs protein.           25   1.6  
AY578796-1|AAT07301.1|  437|Anopheles gambiae Gbb-60A protein.         24   4.9  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    23   6.4  
AY347952-1|AAR28375.1|  634|Anopheles gambiae putative sulfakini...    23   6.4  

>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 26.2 bits (55), Expect = 0.91
 Identities = 14/39 (35%), Positives = 23/39 (58%)

Query: 56   DDIDVAPHEWNITREMWLAQIVNDTESVREYNPIRLVIV 94
            DD   A +  +I R   L + V+D+E++REY   R V++
Sbjct: 2502 DDESHAKYVSDIGRSKMLNESVDDSETIREYRRPRDVLL 2540


>AY823259-1|AAX18444.1|  194|Anopheles gambiae pburs protein.
          Length = 194

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 1/51 (1%)

Query: 20 TSRAERLSCSVALTALVICIGLTLYFALTTETVANDDDIDVAPHEWNITRE 70
          T+ A    CS+ L   V+ + LTL  A+T +    D+  +  P E ++ +E
Sbjct: 48 TALAASNCCSIVLCC-VLLLTLTLTVAVTAQHNQADETCETLPSEIHLIKE 97


>AY578796-1|AAT07301.1|  437|Anopheles gambiae Gbb-60A protein.
          Length = 437

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 8/31 (25%), Positives = 16/31 (51%)

Query: 203 YYINGACDFQSTASPGSNLYKALKSFEHFDH 233
           YY +G C+F   A   +  +  +++  H +H
Sbjct: 363 YYCSGECNFPLNAHMNATNHAIVQTLVHLNH 393


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 23.4 bits (48), Expect = 6.4
 Identities = 10/17 (58%), Positives = 12/17 (70%)

Query: 134 GNDGRVYEGRGWGLVGA 150
           G+DG  YEG G G VG+
Sbjct: 541 GSDGPEYEGAGRGGVGS 557


>AY347952-1|AAR28375.1|  634|Anopheles gambiae putative sulfakinin
           GPCR protein.
          Length = 634

 Score = 23.4 bits (48), Expect = 6.4
 Identities = 11/30 (36%), Positives = 16/30 (53%)

Query: 115 LQSNVLNNLEDDIPYNFLIGNDGRVYEGRG 144
           L+ N +N    +   + + GND  VY GRG
Sbjct: 571 LRQNTINQSGAERNNSDMSGNDSLVYVGRG 600


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.322    0.138    0.429 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 277,485
Number of Sequences: 2123
Number of extensions: 10704
Number of successful extensions: 29
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 24
Number of HSP's gapped (non-prelim): 5
length of query: 253
length of database: 516,269
effective HSP length: 63
effective length of query: 190
effective length of database: 382,520
effective search space: 72678800
effective search space used: 72678800
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 47 (23.0 bits)