Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000585-TA|BGIBMGA000585-PA|IPR002502|N-acetylmuramoyl-L-
alanine amidase, family 2, IPR006619|Animal peptidoglycan recognition
protein PGRP
(304 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68296-1|CAA92589.2| 520|Caenorhabditis elegans Hypothetical pr... 33 0.25
Z69902-4|CAA93763.1| 410|Caenorhabditis elegans Hypothetical pr... 33 0.33
U64846-11|AAG24118.2| 231|Caenorhabditis elegans Serpentine rec... 28 7.2
U64846-10|AAW88397.1| 341|Caenorhabditis elegans Serpentine rec... 28 7.2
Z92807-4|CAB07263.1| 1004|Caenorhabditis elegans Hypothetical pr... 28 9.5
Z92807-3|CAB07262.1| 1059|Caenorhabditis elegans Hypothetical pr... 28 9.5
Z71261-7|CAI70415.1| 570|Caenorhabditis elegans Hypothetical pr... 28 9.5
Z71261-6|CAA95803.3| 578|Caenorhabditis elegans Hypothetical pr... 28 9.5
U61948-5|AAB03149.2| 509|Caenorhabditis elegans Hypothetical pr... 28 9.5
AJ012296-1|CAA09985.1| 1059|Caenorhabditis elegans calcium ATPas... 28 9.5
>Z68296-1|CAA92589.2| 520|Caenorhabditis elegans Hypothetical
protein C46C2.2 protein.
Length = 520
Score = 33.1 bits (72), Expect = 0.25
Identities = 20/88 (22%), Positives = 37/88 (42%), Gaps = 7/88 (7%)
Query: 134 YLRRGDWQAMRPYTMDFLELPVSFVIIGHTVTQYCNQKYDCIKKIINVQKSHLDARFEDI 193
Y R G W+ RP + ++ + + +I+G+ Q +K + +I + L A F I
Sbjct: 101 YCRPG-WKDFRPAFVQYVGVLIGNIILGYVADQIGRKKTFILSMLIGIPSLSLSATFNSI 159
Query: 194 GPNFLISGNGIVFEGRGANVLSTMLKGW 221
++ G + TM+ GW
Sbjct: 160 AAFYIFRAL------TGIGIAGTMIVGW 181
>Z69902-4|CAA93763.1| 410|Caenorhabditis elegans Hypothetical
protein C47D12.5 protein.
Length = 410
Score = 32.7 bits (71), Expect = 0.33
Identities = 24/98 (24%), Positives = 44/98 (44%), Gaps = 2/98 (2%)
Query: 44 SQLNVSKSSRVHIGPKFVSVTQKVRNTEEIKGQLLGLELVSSQNTRKIRCSIAVFVCWAL 103
+Q V + R ++ + T +N E+I+ + L S + +I +A+ L
Sbjct: 256 NQNGVFSNHRSNLSITYSFTTDSFQNAEKIRRSFSSVVLPSYEKEYEISTIVALIGFSVL 315
Query: 104 IVTVGLSFYVFHYALSK--NEARLDLDIHEPWYLRRGD 139
+V++ SF ++ Y K EAR D I++ L D
Sbjct: 316 VVSLCCSFCIYSYCYEKKLREARNDKVIYQKRLLDNSD 353
>U64846-11|AAG24118.2| 231|Caenorhabditis elegans Serpentine
receptor, class h protein194, isoform a protein.
Length = 231
Score = 28.3 bits (60), Expect = 7.2
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 130 HEPWYLRRGDWQAMRPYTMDFLELPVSFVIIGHTVTQYCNQKYDCIKKIINVQKSHLDAR 189
H YLRR W A + FL LP+ F++ + Q+ ++ C+ I + +
Sbjct: 23 HHWVYLRRL-WLAAHYVIVVFLMLPMVFLVPEENIAQHIFEQLPCLPSYI--YNAPVFVF 79
Query: 190 FEDIGPNFLIS 200
EDI +F+IS
Sbjct: 80 TEDITYHFIIS 90
>U64846-10|AAW88397.1| 341|Caenorhabditis elegans Serpentine
receptor, class h protein194, isoform b protein.
Length = 341
Score = 28.3 bits (60), Expect = 7.2
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 130 HEPWYLRRGDWQAMRPYTMDFLELPVSFVIIGHTVTQYCNQKYDCIKKIINVQKSHLDAR 189
H YLRR W A + FL LP+ F++ + Q+ ++ C+ I + +
Sbjct: 133 HHWVYLRRL-WLAAHYVIVVFLMLPMVFLVPEENIAQHIFEQLPCLPSYI--YNAPVFVF 189
Query: 190 FEDIGPNFLIS 200
EDI +F+IS
Sbjct: 190 TEDITYHFIIS 200
>Z92807-4|CAB07263.1| 1004|Caenorhabditis elegans Hypothetical
protein K11D9.2b protein.
Length = 1004
Score = 27.9 bits (59), Expect = 9.5
Identities = 15/61 (24%), Positives = 31/61 (50%)
Query: 20 SSDFVLMDERMIASASRAAVSPPISQLNVSKSSRVHIGPKFVSVTQKVRNTEEIKGQLLG 79
S+ FV ++ + + PP ++++ S + H G + + +T +NT E G+ +G
Sbjct: 582 STQFVKYEQDITFVGVVGMLDPPRTEVSDSIKACNHAGIRVIMITGDNKNTAEAIGRRIG 641
Query: 80 L 80
L
Sbjct: 642 L 642
>Z92807-3|CAB07262.1| 1059|Caenorhabditis elegans Hypothetical
protein K11D9.2a protein.
Length = 1059
Score = 27.9 bits (59), Expect = 9.5
Identities = 15/61 (24%), Positives = 31/61 (50%)
Query: 20 SSDFVLMDERMIASASRAAVSPPISQLNVSKSSRVHIGPKFVSVTQKVRNTEEIKGQLLG 79
S+ FV ++ + + PP ++++ S + H G + + +T +NT E G+ +G
Sbjct: 582 STQFVKYEQDITFVGVVGMLDPPRTEVSDSIKACNHAGIRVIMITGDNKNTAEAIGRRIG 641
Query: 80 L 80
L
Sbjct: 642 L 642
>Z71261-7|CAI70415.1| 570|Caenorhabditis elegans Hypothetical
protein F21C3.4b protein.
Length = 570
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/53 (24%), Positives = 23/53 (43%)
Query: 212 NVLSTMLKGWNRRSITIMFLGDYRTDKTTPAQFEHLDILLNQLVKQGVLRPDY 264
N+ S + W + ++ F+G Y D + +E+ D+L N P Y
Sbjct: 68 NIQSLQIGRWLKLTVCQNFVGQYVLDSSNSCGYENWDVLPNHRNSSARFFPKY 120
>Z71261-6|CAA95803.3| 578|Caenorhabditis elegans Hypothetical
protein F21C3.4a protein.
Length = 578
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/53 (24%), Positives = 23/53 (43%)
Query: 212 NVLSTMLKGWNRRSITIMFLGDYRTDKTTPAQFEHLDILLNQLVKQGVLRPDY 264
N+ S + W + ++ F+G Y D + +E+ D+L N P Y
Sbjct: 68 NIQSLQIGRWLKLTVCQNFVGQYVLDSSNSCGYENWDVLPNHRNSSARFFPKY 120
>U61948-5|AAB03149.2| 509|Caenorhabditis elegans Hypothetical
protein C46A5.2 protein.
Length = 509
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/39 (28%), Positives = 20/39 (51%)
Query: 118 LSKNEARLDLDIHEPWYLRRGDWQAMRPYTMDFLELPVS 156
L ++ +++ I+ +YL DW +R Y + LP S
Sbjct: 308 LYNGDSNVEIGIYPRYYLNSNDWNRVRFYQKSMILLPKS 346
>AJ012296-1|CAA09985.1| 1059|Caenorhabditis elegans calcium ATPase
protein.
Length = 1059
Score = 27.9 bits (59), Expect = 9.5
Identities = 15/61 (24%), Positives = 31/61 (50%)
Query: 20 SSDFVLMDERMIASASRAAVSPPISQLNVSKSSRVHIGPKFVSVTQKVRNTEEIKGQLLG 79
S+ FV ++ + + PP ++++ S + H G + + +T +NT E G+ +G
Sbjct: 582 STQFVKYEQDITFVGVVGMLDPPRTEVSDSIKACNHAGIRVIMITGDNKNTAEAIGRRIG 641
Query: 80 L 80
L
Sbjct: 642 L 642
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.323 0.137 0.422
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,425,450
Number of Sequences: 27539
Number of extensions: 302459
Number of successful extensions: 612
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 604
Number of HSP's gapped (non-prelim): 10
length of query: 304
length of database: 12,573,161
effective HSP length: 81
effective length of query: 223
effective length of database: 10,342,502
effective search space: 2306377946
effective search space used: 2306377946
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 59 (27.9 bits)
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